Gadus morhua (Atlantic cod): 115542631
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Entry
115542631 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115542631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115542631
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115542631
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115542631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
fn3
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
PRY
TRIM_CC
Pur_ac_phosph_N
zf-RING_5
FN3_DSCAM-DSCAML_C
zf-RING_2
GD_AH_C
Ig_J
Motif
Other DBs
NCBI-GeneID:
115542631
NCBI-ProteinID:
XP_030210817
Ensembl:
ENSGMOG00000016484
UniProt:
A0A8C5C9F4
LinkDB
All DBs
Position
4:complement(37818480..37865633)
Genome browser
AA seq
742 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILATGNSASSSVTSSSNAAAAAAN
ASFQCPTCRYVISLSPQRGLEGLKRNITLQNIIDRVQRAANASTLPLALSLASSANASNT
AAVAPYIGADSPTDEGGHHHAHGHGHARYNHKHLALVPLLVSTTTVGVMSTTPPPCVAPP
PPPPPTPPPEPVRCQFCEQEPAPEAVKTCVTCEVSYCEECLRATHPNKKPFTTHRLVAPV
DDSHLRGLQCPEHEEERVNMYCVTDETLICSLCKLVGRHRDHQVAALSERYEKMRQSLDC
NLGHLIKRNNELESMMGKLIQTCQHVEVNASRQEGKLLEECDLLIEIIQQRRQIIGSKIK
EGKTVRMRKLAQQISTCQQCIERSSSLITQADQTLKETDHARFLQSAKGITERVSMATAS
TQVLIPEINLTDKFDSFALDFTREKKLLENLDYLTAPTAPNIREELSTASYDTISVHWTS
DDEFSVVSYELQYTIFTGQANIASLCDSLDSWMIVPNIKQNHYTVHGLQCGTKYVFVVRA
INQAGSRSSEPGTLKTNSQPFKLDPKSAHRKLKISHDNLTVERDEATSKKAHSQERFTSH
SSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNNSWV
VRHNSKELTVEPSPHLRRVGVLLDYDAGDLSFYDALGSQHLHTFNVSFAQPVCPVFNVWN
KCLTVLTGLPIPDHLEALEPLS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcggagctcacctgcccaatctgcctggagctgttcgaggacccg
ctgctgctgccctgcgcccacagcctctgttttggctgcgcccaccgcatcctcgccacc
ggaaactccgcctcctcctccgtcacctcctcctccaacgccgccgccgccgccgccaac
gcctccttccagtgccccacctgccgctacgtcatctcgctgagcccccagcgcggccta
gaggggctgaaacgcaacatcaccctgcagaacatcatcgaccgcgtgcagcgcgccgcc
aacgcctcgacgctgccgctagcgctgtcgctagccagcagcgccaacgccagcaacacc
gccgccgtcgcgccctacatcggcgccgattcgccgacggacgagggcgggcatcaccac
gcccacggacacggacacgcccggtacaaccacaagcacctcgcgctcgttcccctgctg
gtcagcaccaccaccgtgggcgtcatgtccacgactccgcccccttgcgtcgccccgccc
ccgccgccgccgccgaccccgcccccggagccggtgcgctgccagttctgcgagcaggag
ccggcgccggaggcggtgaagacgtgcgtgacgtgcgaggtgtcgtactgcgaggagtgc
ctgcgcgccacgcaccccaacaagaagccgttcaccacccaccggctggtggcgccggtg
gacgactcccacctgcgcgggctgcagtgcccggagcacgaggaggagcgcgtcaacatg
tactgcgtgacggacgagacgctcatctgctcgctgtgcaagctggtggggcggcaccgc
gaccaccaggtggcggcactgagcgagcgctacgagaagatgaggcaatctctggactgc
aacctgggccacctcatcaagaggaacaatgagctggagtctatgatggggaagctcatc
cagacctgccaacatgtagaggtgaacgcgtcgcggcaggagggcaagctgctggaggag
tgtgacctcctcatcgagatcatccagcagcggaggcaaatcatcggctccaagatcaag
gagggcaagacggtgcgcatgaggaagctggcccagcagatctccacctgccagcagtgc
atcgagcgctcctcctccctcatcacgcaggcggaccagacgctgaaggagaccgaccac
gcccgcttcctgcagagcgccaagggcatcaccgagagggtttccatggcgacggcgtcc
acccaggtgctgatcccggagatcaacctgacggacaaattcgactcgttcgccctggac
ttcactcgggagaagaaacttctggagaacctggactacctgacggccccgaccgcgccc
aacatccgggaggagctgagcaccgcctcctacgacaccatcagcgtccactggacctct
gacgacgagttctccgtcgtctcctacgagctccaatacaccatcttcaccgggcaggcc
aacattgccagcttgtgcgactccctggacagctggatgatcgtgcccaacatcaagcag
aaccactacacggtgcacggcctgcagtgcggcaccaagtacgtgttcgtggtgagggcc
atcaaccaggcgggcagccgcagcagtgagccggggacgctcaagaccaacagccagccc
ttcaagctggaccccaagtcggcgcaccgcaagctgaagatctcccacgacaacctgacg
gtggaacgggacgaggccacgtccaagaaggcccacagccaggagcgcttcaccagccac
agcagctacggcgtggtgggcaacgtgtacatcgacagcggccgccactactgggaggcg
ctgatagggggcagcacctggtacgccgtgggcatcgcctacaagtcggcacccaagcac
gagtggatcggcaagaactctgcctcgtgggtgctgtgccgctgcaacaactcgtgggtg
gtgcgccacaacagcaaggagctgacggtggagccctccccccacctgcggcgggtgggt
gtcctgctggactacgacgcgggcgacctgagcttctacgacgcgttgggctcgcagcac
ctgcacaccttcaacgtgtccttcgcccagcccgtgtgccccgtgttcaacgtgtggaac
aagtgcctgacggtgctgaccggccttcccatccccgaccacctggaggcgctagagccc
ctcagctga
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