KEGG   Gadus morhua (Atlantic cod): 115542660
Entry
115542660         CDS       T10832                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115542660
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115542660
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 115542660
NCBI-ProteinID: XP_030210847
Ensembl: ENSGMOG00000013965
LinkDB
Position
4:complement(3744825..3791661)
AA seq 1785 aa
MWILHLAILLAVGWRAGAMLPDFGEGCTVGSCYPATGDLLIGREDKLSVSSTCGLEEPER
YCIVGHLEGEKKCFTCDSKHMYDERLHPDSHTIENLVTTFASNRLKTWWQSENDMENVTI
QLDLEAEFHFTHLIMTFRTFRPAAMVIERSMNFGKTWQVYRYFGYNCQTAFPGVSQGPMV
DVDDVVCDSRYSDIEPSTEGEVIFRVLDPAYKIEDPYSPRIQNLLKITNLRVRFSKLHTL
GDNLLDHRDEVTQKYYYALYDMVVRGNCFCYGHAAKCAPMEGAREGVEGMVHGRCVCEHY
TEGLNCERCQDFYHELPWRPALGYNTNACKRCECNHHSFACHFDMAVYVSTGNMSGGVCE
ACLHNTTGRQCEQCRPFFYQHPNRDLRAPHICEPCNCDPEGSLQGGMCDGRTDVSAGLIS
GQCRCKASVEGERCDHCRQGHYGLGQGDSGCLPCTCNALGTLPGGTPCDMHSGKCLCKRL
VDGDHCDLCLPQHWGLANDMDGCRACDCDQGGAIHNNCNQHTGQCECQEHMSGRRCDQVD
SGFYFIALDHYTYEAEDAAHGPGVTVVPRPSPLDRSPTWTGVGFVNVPEGAFLEFTIDNV
PESMDYDLLIRYEPQLPEEWENVRIRVDRPDPSLLETTSHCGTSDYLQSGDEQTVALSPG
SRHVELGWPVCLEQGLNYTVRLSLPHYSAHAQVHKPHTLIDSLVLMPRVQELNLFEGSEG
EAAWDTFQRYRCLESSQSVVKSPATDICDDYIFSVSALLHQGAMACQCDPQGARSAVCDP
SGGQCQCRPNVVGRNCEHCSPATFLFGPDGCRPCECDPRGSTHAFCHEATGQCACVAGAT
GRQCSGCLPGHWGFPHCRPCHCNGHSALCSAHTGECLDCRENTAGHNCERCLVGYHGDPA
LGSGGHCRPCMCPDGPGSRRQHADGCYHRHDQDLMVCACRPGYKGVRCEECAPGHYGDPQ
VPGGRCMPCQCSANIDLQDPGACDARSGACLRCLHHTEGPACDRCRAGYHGNATTQSCRK
CMCEPLGSAAGACPAEGGCHCDRRTGQCPCRPSVLGQSCDRCAPDTWGLGGGEGCQSCDC
EPGHAFGSSCDLLTGQCSCKPGFGGRTCRECRDLFWGDPKVKCHACACNPRGITGEQCHR
SSGQCPCVAGVSGPRCDQCARGYSGAFPACEPCHGCFALWDVAVGELTNQTRALSGHVAE
LQSGGGAVTAPYRELVGRLEANAAAVRVVLEGDGAVAALDEARELMNHILGVMSYLNGML
NTTDGDLGSLRDQGNATRATLDQLTEEAGALERAVKELKEQVYNAKNSNFQGAMDTISEA
HLDSTTAELQVNSSTSHPGNTVEQSAALRKATEDELSGSQKEFERKVERQTQKLDKLDAS
LEEMDLSELSVKTCGAVGGNDEACSGGPCGGLGCVGEDGAPRCGGQTDCKGLVAASAAAH
KSAQDLDLEIVSAMQEVEKLSRLVFDAKLRAGEAKVTAQQVLVRANQSKERVEQSNEQLR
ALIRDIRDLLTNGKANVSVVEMVSNEVLAMELPTSSSELQNMTRDIRERVSSLTSVEGVL
SQSAEDIAAAERLLLQAKAASEEASTLKETIDLARAALEEADKAQNLASDAIQQAMQNTN
STMTLLLSVESVTEASEFSLSNATGRLLQLEREVGLLRQSHLEASRTAAGATASSERATE
DAEQAQQEFDGAVTEQYGRAQELVEDKGEVVLEARRRADALQTEAKELLAQSSDKLQRLR
ELERSYEVNQRTLEDKAEELALLEQTVRKVMDEISHKVTLYSTCL
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgtggatccttcatctcgcgatacttttggccgtgggatggcgggccggggcgatgctc
cccgacttcggggagggctgcaccgtggggagctgctaccccgccacgggggaccttctc
atcggccgcgaggacaagctcagcgtctcctccacctgcggcctggaggaacccgagcgc
tactgcattgtgggacacctcgagggggagaagaagtgcttcacgtgtgactcgaagcac
atgtatgacgagcgactgcaccccgacagccacaccatcgagaacctggtcaccaccttc
gccagcaaccggctgaagacctggtggcagtcggagaacgatatggagaatgtcaccata
cagctggacctggaagccgagttccacttcacgcatctgattatgaccttcaggacgttc
cggccggccgccatggtgatcgagcgctccatgaacttcgggaagacgtggcaggtgtac
cgctactttggctacaactgccagacggcgttcccgggcgtctcccaggggcccatggtc
gacgtggacgacgtcgtctgcgactcgcgctactccgacatcgagccctcgaccgaggga
gaggtgattttccgagtgttggaccctgcctataaaatcgaggacccctacagccctagg
attcagaacctgctgaagatcaccaacctgcgcgtgcgtttctccaagctccacactctg
ggcgacaacctgctcgaccaccgcgacgaggtcacccagaagtactactacgccctctac
gacatggtcgtccgcggcaactgcttctgctacgggcacgccgccaagtgcgccccgatg
gagggggcacgcgagggcgtggagggcatggtgcacggtcgctgtgtgtgtgaacactac
actgagggtctgaactgcgagcgctgccaggacttttaccacgagctgccctggaggccc
gccctgggatacaacaccaacgcctgcaagaggtgtgagtgtaaccaccactcgttcgcg
tgccacttcgacatggcggtatacgtctccacgggcaacatgagcggcggcgtgtgcgag
gcgtgcctccacaacaccaccggacgccagtgcgagcagtgccgccccttcttctaccag
caccccaaccgagacctgagggccccccacatctgcgagccgtgtaactgcgacccagag
ggctccctgcaggggggcatgtgtgacggccgcaccgacgtcagcgcggggctgatctcg
ggtcagtgccgctgtaaggccagcgtggagggggagcgctgtgaccactgccgacaggga
cactacggcctgggacagggggacagcggctgcctgccgtgcacctgcaacgcgctgggc
acgttgccggggggaacgccctgcgacatgcactcagggaagtgcctctgcaagaggctg
gtcgacggggaccactgcgacctgtgtctgccacaacactggggcttggccaatgacatg
gacggctgcagagcatgtgactgcgaccagggcggggctatccacaacaattgtaaccag
cacacagggcagtgtgagtgccaggagcacatgtcggggcggcgctgcgaccaggtggac
tctggcttctacttcatcgccctggaccactacacctacgaggccgaggacgccgcgcac
ggacccggcgtcacggtggtccctcgcccgtccccattggaccggagccctacctggaca
ggtgtgggctttgtcaacgttccggagggcgccttcctggagttcaccatcgacaacgtc
cccgagtccatggactacgacctgctcatccgctacgagccccagctcccggaggagtgg
gagaacgtgaggatccgggtggaccggccggaccccagcctcctggagaccaccagccac
tgcggcacctccgactacctgcagagcggcgacgagcagaccgtcgccctgtcccccggc
tccaggcacgtggagctgggctggcccgtgtgtttggagcagggcctcaactacaccgtg
cgcctcagcctgcctcactactcagcgcacgcacaagtacacaagccccacaccctcata
gactcgctggtgctgatgccgcgggttcaggagctgaacctgttcgagggctcggagggg
gaggcggcctgggacaccttccagaggtaccgctgtctggagagcagccagagcgtggtg
aagagccccgccaccgacatctgcgacgactacatcttcagcgtgtcggcgctgctgcac
cagggcgccatggcctgtcagtgcgacccccagggggcccggtcagccgtgtgcgacccc
agcgggggccagtgccagtgccggcccaacgtcgtcgggcgcaactgcgagcactgctcc
ccggccaccttcctgttcggccctgacggctgcagaccgtgcgagtgcgaccctcgcggc
tcgacccacgccttctgccacgaggccacggggcagtgcgcgtgcgttgccggggcgacg
gggcggcagtgctccggctgcctcccgggtcactggggcttcccccactgccggccgtgc
cactgcaacgggcacagcgccctctgcagcgcccacaccggggagtgcctggactgcagg
gagaacaccgccggacacaactgtgagaggtgcctggttggttaccacggcgaccccgcg
ctggggtccggcgggcactgccgcccgtgcatgtgtcccgacgggccgggcagccggcgg
cagcacgccgacggctgctaccaccgccacgaccaggacctgatggtgtgtgcctgcagg
ccgggatacaaaggtgtcaggtgcgaggagtgcgcccccggtcactacggcgacccccag
gtcccggggggccgctgcatgccctgccagtgcagcgccaacatcgacctgcaggacccc
ggcgcgtgcgacgcgcgctcgggggcgtgcctccgctgcctgcaccacaccgaggggccc
gcctgcgaccgctgccgcgccggctaccacggcaacgccaccacccagagctgcaggaag
tgcatgtgtgagcctctgggctctgctgcgggcgcctgccctgccgagggggggtgccat
tgcgaccgccggacgggccagtgcccgtgccggcccagcgtcctgggccagagctgcgac
cgctgcgcccccgacacctggggcctgggcgggggggagggctgccagagctgcgactgc
gagcccggccacgccttcgggtcctcctgtgatttgctgacaggacagtgctcgtgtaaa
ccaggcttcggtgggaggacgtgtcgggagtgcagagatctgttctggggggatcccaag
gtcaaatgtcacgcctgcgcctgcaaccctcgcggaatcacgggcgagcagtgccaccgc
tcctccggccagtgcccctgcgtggcgggcgtctcgggcccccgctgcgaccagtgcgcc
cgcggctacagcggcgcgttccccgcctgcgagccgtgccacggctgcttcgccctgtgg
gacgtcgcggtgggcgagctgaccaaccagacgcgggctctgagcgggcacgtggccgag
cttcagagcgggggcggggcggtgacggcgccgtaccgggagctggtcggccgcctggag
gccaacgccgccgccgtacgggtcgtcctggagggggacggcgccgtcgcggccctggac
gaggcccgcgagctcatgaaccacatcctcggcgtgatgtcatacctgaacgggatgctc
aacaccaccgacggcgacctgggcagtctccgggaccagggcaacgccacccgcgccacc
ctggaccagctgacggaggaggcgggcgcgctggagcgggcggtgaaggagctgaaggag
caggtgtacaacgccaagaactccaacttccagggagcgatggacaccatctctgaggcg
cacttggactccaccacggctgagctgcaggtcaactcctccaccagtcaccccggcaac
accgtggagcagtcggcggccctacggaaagccaccgaggacgaactgagcggctcccag
aaggagttcgagcgcaaggtggagaggcagacgcagaagctggacaagctggacgcctcg
ctggaggagatggacctctcggagctcagcgtgaagacgtgcggcgccgttgggggcaac
gacgaggcctgctccgggggcccctgcgggggtctgggctgcgtgggggaggacggggcc
ccccggtgcgggggccagacggactgtaagggcctggtggccgcctccgctgccgcccac
aagtcggcccaagacctggacctggagatcgtctccgccatgcaggaggtggagaagctg
tcccgcttggtgtttgatgccaagctgcgtgcgggcgaggccaaggtgaccgcccagcag
gtgctggtcagagccaatcagagcaaggagagggtggagcagagcaacgagcagctgcgg
gccctcatcagggacatacgagacctcctgaccaatggcaaggccaacgtgtcggtggtg
gagatggtgtccaacgaggtgctggccatggagctgcccacctcgtcgtccgagctgcag
aacatgacccgggacatccgggagcgggtcagctctctgaccagcgtggagggcgtcctc
agccagagcgccgaggacatcgccgccgcggagaggctactgctgcaggccaaggccgcc
agtgaggaggcctccaccctgaaggagaccatcgacttggcccgggcggcgctggaggag
gcagacaaagcccagaacctggccagcgacgccatccagcaggccatgcagaacaccaac
agcaccatgaccctgctactctcggtggagtcggtgacggaggcgtcggagttctccctg
agcaacgccacggggcgcctgctgcagctggagcgggaggtcgggctgctgaggcagagc
cacctggaggccagccgcacggccgccggcgccaccgccagcagcgagcgggccaccgag
gacgcagagcaggcccagcaggagttcgacggggcggtgacggagcagtacggccgggct
caggagctggtggaggataagggggaggtggtgctggaggccagacggagggcagacgcc
ctgcagacggaggccaaggagctgctggcccagagcagtgacaagctccagaggctacga
gagctggagcggtcctacgaggtgaaccagcgcaccctagaggacaaggcggaggagctc
gccctcctggagcagacggtgcgcaaggtgatggacgagatcagccacaaggtcacgctc
tacagcacctgcctctga

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