Gadus morhua (Atlantic cod): 115542771
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Entry
115542771 CDS
T10832
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
gmh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115542771
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115542771
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115542771
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115542771
03036 Chromosome and associated proteins [BR:
gmh03036
]
115542771
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115542771
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115542771
SWI/SNF complex
115542771
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115542771
PBAF complex
115542771
SWI/SNF complex
115542771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
115542771
NCBI-ProteinID:
XP_030211044
Ensembl:
ENSGMOG00000008614
UniProt:
A0A8C5B3Z3
LinkDB
All DBs
Position
4:11269745..11277075
Genome browser
AA seq
372 aa
AA seq
DB search
MQLALSKTFGQKPIKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAISINTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQSEVLVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSLLEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERDNSPETFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTR
RMRRLANTAPSW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggcattgagtaaaacatttggccagaagcctatcaaatttcagcttgaacag
gatggggatttttacatggttggttcggaggtggggaactatttgcgtatgttcagaggc
tcactttacaaaaggtacccatcactatggaggaggctggcatccgttgaggagaggaag
aagatcgtagcttcatctcatgctacaagtgtgactctgctcaaggcatcagagtgtgag
gagatcttcgagggtaacgatgaaaaatataaagctatatccatcaacacggaaccccca
gcctacctccgggaacagaaggcaaagcggagcagccagtgggttcccacgctacccaac
agctcccaccacttggacgccgtgccgtgctccaccaccatcaaccgcaaccgcatgggt
cgggacaagaagaggaccttccccctatgcttcgatgaccacgatcctgcggtgatccac
gagaatgcatcccagtctgaggtgctggtccccattcgtctggacatggaaatcgacggg
cagaaactcagagacgctttcacatggaacatgaatgaaaagctgatgaccccggagatg
tttgcagagattctgtgtgacgacctggacctgaaccccctggccttcgttccggccatc
gcctcggccatccggcagcagatcgagtcctaccccacagacagcctcctggaggagcag
gccgaccagagggtcatcatcaagctgaacatccacgtggggaacatctctctggtggac
cagttcgagtgggacatgtccgagagggacaactcccccgaaacctttgccctaaagctg
tgctcggagctgggtcttggtggagagtttgtcaccaccatcgcctacagcatccgaggt
cagctcagctggcaccagaggacgtacgccttcaggtccgatttcagtgagaacccactg
cctactgtggagatcgctatacgcaacacaggggacgccgaccagtggtgcccgctgctc
gagaccctgactgatgcagaaatggagaagaagatccgagaccaagacaggaacacaaga
cgcatgcggcggttggccaacacggcgccatcctggtag
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integrated database retrieval system
