Gadus morhua (Atlantic cod): 115542825
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Entry
115542825 CDS
T10832
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115542825
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115542825
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmh00535
]
115542825
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115542825
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115542825
Proteoglycans [BR:
gmh00535
]
Cell surface proteoglycans
Others
115542825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
PTP-NADK
KRAB
DSPc
Y_phosphatase3
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
115542825
NCBI-ProteinID:
XP_030211127
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All DBs
Position
4:complement(6064978..6126591)
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AA seq
1373 aa
AA seq
DB search
MSVSKARCFSALLLLLSQMVTAAEPFVRGSKRLPEDIDWSYSGTLNQGRWGQRFPSCLSA
RQSPVDIDETFTQVRLQYQGLQLEGWGHPTSDSTTVHNDGKTVTLGVDGEFYVSGGGLTG
RFRVGSISFHWGRCNASSEGSEHSLNGMKYPLEMQIYCYDPEQYESLDHAVREGGGVAAL
AVLFETTLEDNESLRPVIDAVNAVSRFGKRATVDPFTLRDLLPTNTDKYYIYNGSLTWPP
CSETVEWIVFKHPAAISETQLEVFCEVMTMEQAGYVMLTDYLQNNFRVQQQQFMGQVFSS
YTGVEEVQTPMCSSEPVNVQADPQNDTTIVVTWERPRAVYDTTIDWYTVSYQSLQGGPAA
PHLQYRTDGDQDVAAIISSLLSNSSYVVQVVAVCTNRLTGRPSDLIIVDMPLEDPESDSG
PDSGSEADDNLQVLSQSKWQTKAAEQPNNVDLSPEEAESPGEEVPPEQTVVYQNHPTDQQ
DRDRDGSQDRDPSRNLPVPLSTPSDPEVLAESEPDPPKTTRTKPEQTGSKQKDVAGSDRK
WTDENPRTPVQRPYTRPAASGNGAIWVGMVTEQPGFLFPASKTTPPPAHRRITEEASLSM
GPDESAAEPATRNDLPTPEPDPYTPPLEDFQVTDVYYEDTDDDLLAETTSLPAVVTTGQP
EASSNSSHESRVGGVRVLERERRTVVPLAVVSSLTILCLLVLVGILIYWRNCFQTANFYS
EDNMLPKATSVPSTPVILATDGHEPMTVKQFVKHVLELHASNTFPQEFEIVTQAYEEVQA
CTVEMGISTESSNHPDNRSKNRYINILAYDHSRVKLCSGQDRDGRAGDYINANFIDGCER
SRAYIAAQGPLRSGREDFWRMVLQQNIGVVVMITNLKEKGRTKCEQYWPEENQEEYGPYQ
VTLRSTQTLAYYTVRTLGVRDTGAKVCQKGMSEHTVVQFHYTQWPDMGVPEYNLPVLSFI
RASAGARTKDMGPLLVHCSAGVGRTGAYIVIDSMLQQIQDQGTVNVLGFLKHVRTQRNFL
VQTQEQYVFIHDALVEAILSRETLVTSDLLHAYVSRLLIPGPAGRTRMDKQFKLISQRQA
RHADYSTALKDENADKNRARALMPVERSRVCLTASESNATGYINASYVMGRYHSKEFIVG
QDPLSSTVADFWTMIWEHSAHTVVSLPDPHSVVSVPDPYTQGDGEVACVYWPIKDQPMSF
EGLIVSFSREEHLSLTNDEKILVQDFILESSQSDGVLEVRRYSATCWPNPDGPIRSSFEL
VAAVREHSANTAGPTVVHDPLGGPTSGLFCALSSLSSQLEEDAAVDVYTAARMTNLRRPG
VFNDLEGYQFLYRSVLSLVSSQEDQKTLRSPETNGSLPLGTTASMAESLESLM
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtccaaagcgagatgtttcagcgccctgcttcttctgttgagccaaatggtt
actgcagcagaaccttttgtccgaggctccaaacgactcccagaggacatcgactggtcc
tactcaggcacgctcaaccagggccggtggggccagcggttcccgtcctgcctcagtgcc
aggcagtccccggtggacatcgacgagaccttcacccaggtgcggctgcagtaccagggc
ctgcagctggagggatgggggcaccccaccagcgactccaccaccgttcacaacgacggg
aagaccgtgacgcttggcgtggacggggagttctacgtgagtggagggggtctgacgggc
cggttccgtgtcggttcgatctccttccactgggggcgctgtaacgccagctcggagggc
tctgaacacagcctgaacggaatgaagtaccccctggagatgcagatctactgctacgac
ccggagcagtacgagagcctggaccacgcagtgagggagggggggggggtcgccgccctg
gccgtcctcttcgagaccaccctggaagacaacgagagccttcgtccagtcatagacgcc
gtcaacgccgtcagccggtttggtaagagggctacggtggaccccttcaccctgagagac
cttctccccaccaacacggacaagtactacatctacaacggctcgctcacctggccgccc
tgctcggagaccgtggagtggatcgtgttcaaacaccccgccgccatctctgagacgcag
ctggaggtgttctgcgaggtgatgaccatggagcaggcgggctacgtcatgctgaccgac
tacctccagaacaacttccgggtgcagcagcagcagttcatgggccaggtgttctcgtcc
tacaccggggtggaggaggtccagacgcccatgtgcagctcagagccggtcaacgtgcag
gcggacccccagaacgacaccaccatcgtggtgacgtgggagcggccaagggcggtgtac
gacaccaccatcgactggtacaccgtcagctaccagagcctgcaggggggccccgccgcg
ccccacctccagtaccgcaccgacggggaccaggacgtggccgccatcatctccagcctg
ctgtccaacagcagctacgtggtgcaggtggtggcggtctgcaccaaccggctcacggga
cggcccagcgacctgatcatagtggacatgcctctggaggaccccgagagcgactctgga
cccgacagcggttcggaggccgacgacaacctgcaggtcctgtcccagtccaagtggcag
actaaggcggcggagcagccgaacaacgtggacctgtccccggaggaggccgagagcccg
ggggaggaggttcccccggagcagacggtggtctaccagaaccaccccacggaccaacag
gaccgggaccgggacgggtcccaggaccgggacccgagccggaacctccccgtcccgctg
agcaccccctcggaccccgaggttctggcggagagcgagccggaccctccgaaaaccacg
cggaccaaaccggagcagaccggatccaagcagaaggatgtggccggttcggacaggaag
tggacggacgagaacccgaggacccccgtgcagcggccgtacacaaggccagccgcctcc
gggaacggcgccatctgggtcggcatggtgacggagcagcccggcttcctgtttcccgcc
tcgaagaccaccccgccgccggcccaccggcgaatcacagaagaggcttctctctccatg
gggccggatgagagtgcggccgaaccggccaccaggaatgacctcccgacccctgagcct
gacccctacaccccacccctggaggacttccaggtcacagacgtctactacgaggacact
gacgacgacctgctcgccgagaccaccagcctgcctgctgtggtcactactggtcagcca
gaggccagcagtaacagcagccatgagtcccgggtggggggggtccgggtgctggagcgg
gagcggcgaacagtcgtccccctggcggtggtttcctccctcaccatcctctgtctgctg
gtgctggtgggcatcctcatctactggaggaactgctttcagacggccaacttctactca
gaggacaacatgctgcctaaagccacgtccgtcccatccacacctgtgatcctggctaca
gatggccacgagccaatgacggtgaagcagtttgtgaagcacgtgctagagctccacgcc
tccaacaccttcccccaggagtttgagattgtcacccaggcctacgaggaggtgcaggcg
tgcacagtggagatgggcattagcactgagagctccaaccatccagacaaccgcagcaag
aaccgttacatcaacatactggcctacgaccacagccgagtgaagctgtgcagcggtcag
gaccgagacggccgggccggggattacatcaacgccaactttatcgacggctgcgagcgg
agccgggcctacatcgccgcccaggggccgctgagatcgggccgggaggacttctggagg
atggtcctgcagcagaacatcggcgtggtcgtcatgatcaccaacctcaaggagaagggc
cggaccaagtgtgagcagtactggccggaggagaaccaggaggagtacgggccctaccag
gtgaccctgaggagcacccagaccctggcctactacaccgtcaggaccctgggggtcagg
gacaccggcgctaaggtgtgtcagaagggcatgtccgagcacacggtggtccagttccac
tacacccagtggccggacatgggggtcccggagtacaacctgcccgtcctctccttcatc
agggcctccgctggggcccgcaccaaggacatggggcccctcctggtgcactgcagtgct
ggggtgggccggaccggggcctacatcgtgattgacagcatgctgcagcagatccaggac
caggggacggtcaacgtgctgggcttcctgaagcacgtcaggacccagcgcaacttcctg
gtgcagacccaggagcagtatgtgtttatccacgatgctctggtcgaggccatcctgagc
agagagaccctggtgacctctgacctcctgcacgcctacgtgtcgcggcttctgatcccg
gggcccgcgggccgcacgcgcatggacaagcagttcaagctgatcagccaacgccaggcc
cgacacgcagactacagcacggccctgaaggacgagaacgcagacaagaacagagccagg
gccctgatgcctgtggagcgctccagagtgtgtctgacggcgtccgagtccaacgccacg
ggctacatcaacgcctcctacgtcatgggccggtaccacagtaaggagttcatcgtgggc
caagaccctctgagcagcaccgtggccgacttctggaccatgatctgggagcacagcgcg
cacacggtggtctccctaccggacccccattcagtggtctctgtaccggacccctacacc
cagggggatggggaggtagcctgtgtctattggccaattaaggaccagccaatgagcttt
gagggtctcattgtgtcgttctcgcgggaggagcatttatctctgaccaacgacgagaag
attctagtccaggactttatactggagtcctcacagagcgacggcgtgctggaggtgagg
cgctacagcgccacctgctggcccaatcccgacggaccaatcaggagcagctttgagctg
gtggccgccgtccgggagcacagcgccaacacggccgggcccaccgtggtgcacgacccg
ctggggggccccacctcggggctgttctgcgccctgtcctcgctgtcctcccagctggag
gaggacgccgcggtggacgtgtacaccgccgcccgcatgaccaacctgaggaggccgggg
gtcttcaacgacctggagggctaccagttcctgtaccgctccgtgctgagcctggtcagc
agccaggaggaccagaagaccctccgctcccccgagaccaacggctccctgccgctgggg
accaccgccagcatggccgagagcctggagtccctgatgtag
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