Gadus morhua (Atlantic cod): 115542828
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Entry
115542828 CDS
T10832
Symbol
fbh1
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115542828 (fbh1)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115542828 (fbh1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115542828 (fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
F-box-like
F-box
AAA_30
PhoH
AAA_11
AAA_22
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
115542828
NCBI-ProteinID:
XP_030211132
Ensembl:
ENSGMOG00000010594
LinkDB
All DBs
Position
4:5937990..5973845
Genome browser
AA seq
1051 aa
AA seq
DB search
MELARTGKAKRIHLNAEDCNELGRGPDGTSVLSQTRPLPSTPKRRPHPRTPTKKRKLESP
SKQQQSMNDFYQVTGVVSSSPQKGSQQPSSSRPTTGRDGGGTAPPPPAGSRAEPGRSGDP
REDDDDDDDDDDDVSLLAALAEEHPETEKGEGEEIDHLEGITSEMFNDTLFECAAARDST
NQKAGVRDLGEEEEEEEEVEPLPDAHYGLLGSSNRGLQEPQGRMEDLPEEVVRLILLLLP
AQDLYRRVVLVCHAWRTIVQDPKFVPYKKQYYRYMMGEKDTVAKMKSILEDGGVLDPSLP
QESVRRLVLLMSQHASGERLRPEDLMRCVGGHRLFPVAQSCLARRFPDLKQQDPHPYAAM
ALVLVLSEAVTDVQALVDLLLAAMSRGAVVEFLSHAAALLLAAANNEVKVSSRIHYNIFY
VLYLMHSSSTSITTGPNGERYQLTHEQQQILSHRIQPDQVVKIMAFAGTGKTSTLVRYAQ
QNPRLRCLYVAFNKSVATEAQRRFPGNVDCRTVHSIAYSDVGKSYQLSKKLVPNLKVFSV
AKVLPAGRGGFIHGKVVTTALNAFMASADRRIAPHHVPNTFKNTKGLVQTLDAKEKAEYV
RDCEEIWRKMKDLNEKSKEGFHMTHDGYLKLWQLKEPKPCLSDSYDVIFIDEAQDCTPAI
MDVLLSQRCAKVLVGDPHQQIYTFRGAVNALRTAPHTHLFYLTQSFRFGAEIAFVGATLL
QVCKKVQKILVGGNQTGSVFGEDFDPVALVPLSTSPAPRGGAAILSRCNFGVFNEAVRLT
DRNPACTLYFVGGVSGIGLSKILDIWTLKQPEHSRTANIKDPFIRSFGSYHGLQAYALQS
EDGELEAKLAVVEKHSQRVPELVGRLRACHRDDGSQADFILSTVHKAKGLEFNTVMVCDD
FARIPCSRHHLTQLSGFNWWDTPPDEWNLLYVAVTRARSTLILTRNIRNILTQAGEYFLR
PQLPGPALPDGLPPRCSVAQCLHRVSADAAFTMSKRPMRFMDGLSPGGPLCERCVWKRVG
PVAFLMSDQALPAPANPERQDLPINMMLLLF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggagctggccaggacagggaaggcgaagaggatccacctgaacgcagaagactgcaat
gagctgggccgaggcccggacggcaccagtgtcctcagccagaccaggcctcttcccagc
accccgaagaggcggccgcacccgaggacgcccaccaagaaacgaaagcttgagagtcct
tccaagcagcagcagagcatgaatgacttctaccaggtgaccggcgtggtcagttccagc
ccccagaaggggtcccagcagcccagctcctcccggcccacgacgggacgcgacggaggg
ggtaccgccccacctccaccagcggggtccagggcggagccagggaggagcggagacccc
cgggaagacgatgacgacgacgacgacgacgacgacgacgtgagcctcctggccgctctg
gctgaggaacatcctgagacggagaagggggaaggggaggagatagaccacctggaggga
atcacgtcggagatgttcaacgacactttgttcgaatgcgccgccgccagagactcgacc
aatcagaaagcaggggtgagggatctaggggaggaggaggaggaggaggaggaggtggag
ccgcttcccgacgcccactacgggctcctgggcagcagcaacaggggcctccaggagccg
cagggtcgcatggaggacctccccgaggaggtggtccgactgatcctgctgctgctgccc
gcccaggacctgtaccgccgcgtcgtgctggtctgccacgcctggaggaccatcgtccag
gaccccaagttcgtcccgtacaagaagcagtactaccgctacatgatgggggagaaggac
acggtggccaagatgaagtccatcctggaggacgggggcgttctggaccccagcctgcca
caggagagcgtccgacggctcgtcttgttgatgtcccagcatgcatctggtgagcggctg
aggccggaggacctcatgcggtgcgttggggggcaccgcctcttccccgtggcccagtcc
tgcctcgcccgccgcttccccgacctcaagcagcaggacccccacccctacgcggccatg
gccctcgtgctggtgctgagcgaggcggtgacggacgtccaggccctggtggacctgctg
ctcgccgccatgtcccgcggcgccgtggtggagttcctgagccacgccgccgccctcctg
ctggccgccgccaacaacgaggtgaaggtcagcagcaggatccactacaacatcttctac
gtcctctacctgatgcacagctcctccacctcaatcaccacagggcccaacggtgagcgc
taccagctgacccatgaacaacaacagattctgagccaccggatccaacccgaccaggtg
gtcaagatcatggcctttgctggcacggggaagacgtccacgctggtgcgctacgcgcag
cagaacccccggctccgttgcctctacgtggcgttcaacaagtcggtggccaccgaggcc
cagcgccgtttccccggcaacgtggactgcaggacggtccactccatcgcctacagcgac
gtcggcaagagctaccaactgagcaagaagctggtgcccaatctcaaggtgttctccgtg
gccaaggtgctcccggccggccggggcggcttcatccacggcaaggtggtcaccaccgcc
ctcaatgccttcatggcctccgccgaccgccgcatcgccccgcaccacgtgccaaacacc
ttcaagaacaccaagggcctcgtccagaccctggacgccaaggaaaaggcggagtatgtc
cgggactgtgaggagatctggaggaagatgaaagacctcaacgagaagagcaaggagggc
ttccacatgacccacgatggttacctaaagctgtggcagctcaaagagccgaagccgtgc
ctgtcggacagctacgacgtcatcttcatcgacgaggcacaggactgcacacccgccatc
atggacgtgcttctgtcccagcgctgtgccaaggtcctggtgggggacccccaccagcag
atctacaccttcaggggggccgtcaacgccctgcgcaccgccccccacacacacctcttc
tacctcacccagagcttccgcttcggagcggagatcgccttcgtgggggcgacacttctg
caggtctgcaagaaggtccagaagatcctggtgggaggaaaccagacgggcagcgtgttc
ggggaggactttgaccccgtggcgttggtgccactcagcactagcccagccccccgcggc
ggcgcggccatcttgtcacgctgtaacttcggcgtgttcaacgaggcggtgcgactcacc
gaccgcaaccccgcctgcacgctctactttgttggcggcgtgtccgggatcgggctgagc
aagatcctggacatctggacgctgaaacagccggagcacagccgcacagccaacatcaag
gaccccttcatccggtcgttcggcagctaccacggcctgcaggcgtacgcgctgcagtcg
gaggatggcgagctggaggccaagctggccgtggttgagaagcactcccaacgcgtccct
gagctggtgggccgcctacgggcctgtcaccgcgacgacggcagtcaggccgacttcatc
ttgagcacggtccacaaggcgaagggtctggagttcaacacggtgatggtgtgcgacgac
ttcgcacggatcccctgctcacgacaccacctgacccagttgtcgggcttcaactggtgg
gacacccccccggatgagtggaacctgctgtacgtggcggtgacgcgggccaggagcaca
ctgatcctgacccggaacatccggaacattcttacccaggccggggagtacttcctgagg
ccgcagctgcccggccccgccctgccagacggcctcccccctcgctgctccgtggctcag
tgtctgcatcgcgtctccgccgacgctgccttcaccatgagcaagcgccccatgagattc
atggacgggttgtcccctggaggccctctgtgtgagcggtgtgtttggaagcgcgtgggc
cccgtagcattcctcatgtcagaccaggccctgccggcccccgccaacccggaacgtcag
gacctgcccatcaacatgatgctgctgctcttctaa
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integrated database retrieval system
