Gadus morhua (Atlantic cod): 115542907
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Entry
115542907 CDS
T10832
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
gmh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115542907 (ube4b)
04120 Ubiquitin mediated proteolysis
115542907 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115542907 (ube4b)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115542907 (ube4b)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
U-box type E3
115542907 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115542907
NCBI-ProteinID:
XP_030211262
Ensembl:
ENSGMOG00000000623
LinkDB
All DBs
Position
1:complement(30447896..30475242)
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AA seq
1182 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPTSQPSTPLSTPLTSPQRETPPGPLPGPSGATSQPLPPAA
SQALGLNVHSGTPATSPMGASGVVYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVDESDRREKRTLAEKESSANSDVSEEQALQLICRILRVS
WKEPDRDVIYLPSLAAEFHQSPKDVYSDFKDLIGQILMEALLMSSQSRVHNPFSSLTATS
QPIAAAKSPDRRLTLVPPPSQGSSPMAPCAGSFGASSLSSAGASGGGGEAASDRFTIEVC
KETEMLNYLIERFDNVGIEEKKAPKICSHPSVSQLMSNIRSQCISHATLVLQGSLTQPRS
PLQESLLVPYMLCRNLPYGFLQELVRMTHQEEGVFRQIFIPILHGLALAVKECSFDSDNF
KFPLMALAELCEIKFGKTHPVCNLMTSLPLWCPTPLSPGCGRELQRLSYIGTFFSLSVFA
EDDSKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETRESALNYM
AALVKSNVKKAQMQTDDKLVSTDGLMLNFLWVVQQLSMKIKLETVDPFYIFHPRCRLVVC
PEETRLKATMEELKSWLAGLKDDPSAFSEPKFPTECFFLTLHTHHLSILPACRRYIRRLR
AIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADAGLLDENLLR
RCLQFYSTVIQLILRMVDPAYPHMSLPLNPDIPKSFAALPEFYIEDVAEFLLFVVQYSPQ
VLYEPCVQDVVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMESHPL
AVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNAGHHGTFLEEFNSGK
QFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPREQQQTRQSQLTQDER
VSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENP
EKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMKKAGIKSTIAI
EKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMSDPVILPSGNVMDRSVILRH
LLNSPTDPFNRQPLTESMLESVPELKERIQAWMREKQGGRLL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcagtgccgatgagatccgcagaaggcgcctggccagactggcaggaggg
ccgacctctcagcctagcacccctctcagcacacccctgacctccccacaaagagagacc
ccgccggggcccctacctggaccctcaggagccacatcccagcccctgcccccggccgcc
tctcaggccctggggctcaatgtccacagtgggaccccggccacatcccccatgggggcc
tctggggttgtctatgggagtcagagcagtgaaggagtgagttctctctccagctccccc
tccaacagcctggagactcagtcccaaagcctgtcccgttcccagagcatggacatcgac
accgcctcctgtgaaaagagcatgtcccaggtggatgtggactcgggcatcgagaacatg
gaggtggacgagagcgaccgcagggagaagaggaccctggctgagaaggagtcctcggcc
aactcagatgtctctgaagagcaggctctgcagctcatctgtaggatcctccgcgtgtcc
tggaaggagccggaccgcgacgtcatctatctcccctcgctggccgccgagttccaccag
agccctaaagacgtgtactctgacttcaaagacctgattggccagatcctgatggaggcg
ctcctgatgtccagccagtcccgcgtccacaaccccttctccagcctgacggccacctcc
cagcccatcgccgccgccaaatcccccgaccgccggctgaccctggtgcccccccccagc
cagggcagcagtcccatggccccctgcgcgggctccttcggcgccagctctctgtccagt
gcgggggcgtcaggagggggcggcgaggctgccagcgaccgcttcaccatcgaagtgtgc
aaggagacggagatgctgaactacctcatcgagcgctttgacaatgtgggcatagaagag
aagaaggcgcccaagatatgcagccatcccagcgtcagccagctgatgagcaacatacgc
tcacaatgtatttctcacgccaccctggtactgcaaggctccctgacccagcccaggagt
cccctgcaggagtcccttctggtcccctacatgctgtgccggaaccttccgtacgggttc
ctccaggagctggtgcgcatgacccaccaggaggagggcgtcttcagacagatatttatc
cccatcctacatgggctggccctggcagtcaaagagtgctcttttgacagcgacaacttc
aagttccccctcatggcgttagctgagctctgtgaaatcaagtttggaaagactcatcct
gtgtgcaatttgatgacgtctctgcccttgtggtgccccacccccctgagcccgggctgt
ggcagggagctccagagactgtcctacatcgggaccttcttcagcctgtcggtcttcgcc
gaggacgactccaaagtgggggacaagtacttctctgggccggccatcaccatggagaac
acccgggtggtcagccagtccctccagcactacctggagtcggcccggggcgacctgttc
aagatcctccacaacatcctgttgaacggagagacccgggagtcggccctcaactacatg
gcagctctggtcaaatcgaatgtgaagaaggctcagatgcagacggacgacaagctggtg
tccacggacggcctgatgctgaacttcctgtgggtggtgcagcagctgagcatgaagatc
aagctggagacggtggaccccttctacatcttccacccgcgctgccggctggtggtctgc
cccgaggagacgcgcctcaaggccaccatggaggagctcaagagctggctggccggcctg
aaagacgacccctctgcgttctctgagcccaagttccccacggagtgcttcttcctgacg
ctgcacacccaccacctctccatcctgcccgcctgccgccgctacatccgacgcctcagg
gccatccgggagctcaacaggacggtggaggagctgaagaacagcgagagccaatggaag
gactctcctctggccagtagacacagagagatgctgaagaggtgcaaaacacagctcaag
aaactggtgcgggccaaggcctgtgcggacgccggcctcctggacgagaacctgctgcgt
cgatgcctccagttctacagcaccgtcatccagctcatcctgcgcatggtggaccctgct
tacccccacatgagcctgccgctgaacccagacatccccaagagcttcgccgcgctgccg
gagttctacatcgaagacgtggccgagttcctgctcttcgtcgtgcagtattctccccag
gtgctgtacgagccctgtgtgcaggacgtggtcaccttcctggtggtgttcatctgcagc
cagaactacatcaggaacccctacctgatcgccaagctggtggaggtgctgttcgtcacc
aacccggctgttcagccgcgcacgcagcgcttcttcgagatgatggagagccacccgctg
gccgtcaagcagctggtgcccgccctcatgaagttctacaccgatgtggagcacacgggc
gccaccagcgagttctacgacaagttcaccatccgctatcacatcagcaccatcttcaag
agcctgtggcagaacgccggccaccacgggaccttcctggaggagttcaactccgggaag
cagtttgtgcgctacatcaacatgctgatcaacgacaccaccttcctgctggacgagagc
ctggagtccctgaagcgcatccacgaggtgcaggaggagatgaagaacaaggagcagtgg
gaccagctgccccgggagcagcagcagacccggcagtcccagctgacgcaggacgagagg
gtctctcgctcctacctggccctggccaccgagaccgtggacatgttccacatcctcacc
aagcaggtccagaagcccttcctcaggcctgagctgggcccccgtctcgccgccatgctc
aacttcaacctgcagcagctctgcgggcccaagtgccgcgacctgaaggtggagaacccc
gagaagtacggcttcgagcccaagaagctgctcgaccagctcaccgacatctacctgcag
ctcgactgcgctcgcttcgccaaggccatcgctgacgaccagcgctcgtacagccgcgag
ctcttcgaggaggtcatctccaagatgaagaaggcgggcatcaagtccaccatcgccatc
gagaagttcaagctgctgtcggagaaggtggaggagatcgtggccaagaactcccagtcg
gagatggactacagcgacgctccggacgagttcaaagaccctctgatggacaccttgatg
agcgacccggtgatcctgccctctgggaacgtcatggaccgctccgtcatcctgcgccac
ctcctcaactcgcccaccgaccccttcaaccgccagccgctcaccgagagcatgctggag
tcagtcccggagctgaaggagcggatccaggcctggatgagggagaagcagggaggccgt
ctgctctaa
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integrated database retrieval system
