Gadus morhua (Atlantic cod): 115542941
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Entry
115542941 CDS
T10832
Name
(RefSeq) toll-like receptor 2
KO
K10169
toll-like receptor 6
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagocytosis
gmh04620
Toll-like receptor signaling pathway
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115542941
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115542941
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115542941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115542941
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115542941
04090 CD molecules [BR:
gmh04090
]
115542941
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
115542941
Pattern recognition receptors [BR:
gmh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115542941
CD molecules [BR:
gmh04090
]
Proteins
115542941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_NXF1-5
LRR_EndoS
RP9_N
Motif
Other DBs
NCBI-GeneID:
115542941
NCBI-ProteinID:
XP_030211314
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All DBs
Position
4:complement(2764177..>2766669)
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AA seq
830 aa
AA seq
DB search
LFFIVCSVQVALLLWTTTVWSWGTFGLAKLIDNQGYASCVTSRRRVQNLSGQNLTNVPLD
LNNDMQYLDLSHNPLVKLQAAPFQRLSQLCFLKATSCGLRLIYPGLFVHTPKLKFLNISH
NLLDYIPDLSLPLLKILDLAGNQYDSYQLPGTFEMLANLSALYLGSVNALQVDFNDFDSL
SDSSLHHLILGGGVEWQRYDQGSLAKMKSLKKITLKVPFCENLDLFENLLEDVNKTQTTN
LEFKIFPDLCNVTGDPFRNLRTMPIVKNVTILNTWINSSFMMIFMKNVFLSNVVTITFEN
ITYNEDTPEGLKFPTLNHTMVISSVIFDRVKHYQYKYPTFEMSVDIYSKLEFVKFSGTGM
NIVPCNTMASLPSLKTLDLSNNLLSDLGFWWPGCSYTSVFPKLRHLSLSKNRFVDLSFIA
QQTHQMKYLESLDLSFNSIVLDKPCFWPIHITSLSLSNNNLGNKVFSFLSQYLQRIDLAK
TGITALTREDLLQFPMLTHLFLSSNSIKVIPTILSPTLVSLYIDQNSITSISRESLAGLP
SLRTLKAGNNTYVCSCDSYWFINTMNKSLLPDWPLDYTCNTPPSVADLPMSEYRTSRMSC
EAWLQAAVALPVTMLIGLAFCSAFYACDGVWYTKMLWMWIRVKRRGQKQANLLNNTTFRY
HSFISYSHQDSAWVESKLVPSLEGAGLSLCIHERDFVPGQWIVDNIINCVEASYKTLFVL
SNHFVQSEWCNYELFFAQHRAIDAQQDSLVFILLEPIPTNSLPKKFLKLRRLLMQQTYLE
WPMDERKQQVFWVNLRSMLQVADHRILKDMDLELTQSASLIPDDLVPLLK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
cttttttttattgtttgcagtgtgcaagtagcactgctgttatggacgacgaccgtctgg
tcttgggggaccttcggcctggccaagctgatagacaaccaagggtatgcatcgtgcgtc
acttccagacgacgagttcagaacctctccggtcagaatcttaccaatgttcctttggat
ctgaataatgacatgcagtacctggacctttctcacaaccccctggtgaaactgcaggca
gctcccttccaaagactctcacaactctgcttcctgaaggctaccagctgtggtctgagg
ctgatatatcctggcttattcgttcataccccgaaactgaaattcctgaacatatctcac
aatttgttagattacatccctgatctgtcactgccactgctgaagatccttgacttggct
ggcaaccaatatgacagctatcaattaccgggcacatttgagatgttagcaaatctgtct
gccctttacttgggaagtgtaaatgctttacaagtggacttcaatgattttgattccctc
tcggatagctcattgcatcatctcatccttggaggaggggttgagtggcaacggtacgat
caaggttctctcgcgaaaatgaaatccctcaagaagataaccctcaaagtgcctttttgt
gagaaccttgatttatttgaaaacctgctggaagatgtgaacaaaacgcaaacaaccaat
ttagagttcaaaatatttccagacctctgcaatgtgaccggggaccctttcaggaacctg
agaaccatgccaatcgtaaaaaatgtaaccattttaaacacttggattaacagcagtttc
atgatgatatttatgaagaatgtttttctttccaatgttgtaacgattacatttgaaaac
ataacctacaacgaagatacacctgaaggattaaagttcccaactctgaatcacacaatg
gtcataagttcggttatatttgatagggttaaacattaccaatacaaataccccactttc
gaaatgagtgtggacatatattccaagttggagtttgtgaagttctcaggcacaggaatg
aacattgtaccttgcaacacaatggcctccttgccgtccctgaaaaccctggacctctca
aacaacctactgtctgacttagggttttggtggcctgggtgctcctatacctcggtgttc
cccaaactaaggcacctctctttgagcaaaaaccgctttgttgacctttccttcatcgct
cagcagacccaccagatgaagtacctggaatctctagacttgagtttcaactccattgtt
ctggataagccgtgcttttggcccatccacatcacatcgctgagcctgagcaacaacaac
ctggggaataaagtattttccttcctgtcccagtacttacagcgaattgacctggcaaag
acaggcatcaccgccctaacacgagaagaccttttgcaatttcccatgttgacccacctt
ttcctgagctccaacagcattaaggtcatccctacgattctatctcccaccttggtcagt
ctgtacatagaccagaattccattacatccatctcccgggagtctcttgcgggtcttcca
agtctcaggactctcaaagctggaaacaacacatatgtctgctcctgtgactcctattgg
ttcataaatactatgaacaaatccttgctgcccgactggcccttggattatacctgcaat
actcccccatccgtggctgacctgccgatgtccgagtacagaaccagcaggatgtcctgt
gaggcctggcttcaggctgccgtggcattacctgtgacgatgctcatcgggctggccttt
tgctctgcgttctacgcctgtgatggagtgtggtacaccaagatgctgtggatgtggatc
cgcgtgaagaggagaggccagaagcaggccaacctgctgaacaacacgacgtttcggtac
cactcgttcatctcctacagccaccaagactccgcctgggtggagagcaagctggtgccg
tccctggaaggggccggactctccctgtgcatccacgagcgagactttgtgcccggccag
tggatcgtggacaacatcattaactgcgtggaggcgagctacaagacgctgtttgtgctg
tccaaccactttgtgcagagtgaatggtgtaactacgaactcttctttgcccagcataga
gctattgacgcccagcaagactccctggtcttcatcctgttggagcctattccgaccaac
tctctgcccaagaagttcttgaaactgaggagattgctgatgcagcagacgtacctggag
tggcccatggatgagcgaaagcagcaggtgttctgggtcaacctcaggtctatgctacag
gtggcggaccaccggatcctgaaggatatggacctagagttaacgcaaagcgcttctctg
atcccagacgatttggttcctttgttaaaatga
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