Gadus morhua (Atlantic cod): 115543053
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Entry
115543053 CDS
T10832
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115543053
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Others
Others
115543053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4800
Beach
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_WDHD1_1st
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Vps41
WDR55
Beta-prop_HPS5
GRAM
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
115543053
NCBI-ProteinID:
XP_030211455
Ensembl:
ENSGMOG00000010845
LinkDB
All DBs
Position
4:complement(41341373..41399168)
Genome browser
AA seq
2807 aa
AA seq
DB search
MASEERLYEVWMLYCNKRDPDYLKLWLEIFIGSYERCLDVDFEKPPSRPDEVPPVLSLLP
DNILQVLRHQLLQCVQKAAEGLEPQQLALALLLLKFLIVVCRNLSNVEEIGTCSYINHVI
NMTTLYIQQLKSKTKEKEMADQTQAEEFVRHALAFCESLYDPYRNWRHRACGERVGTAER
SRQKFKAAPLTVEFVPFFYQCFQESEHLKDSLKCCLLHLFGAIVAGEQRNALLAISPATM
EVLMAVLADSATGSHGDPDGDPDWDGEAPGRRALLTLGCLREVVHRLLASSSDQRPVEIA
SVLDLYFKLLNSDPAAAATQHQHQHQGPGTNQTQAKARPAPLGRHWEKRFVALQVHMLDT
IRDMFLCSDRPVLQAIFLNSNCFEHLTRLLQNSKLINARCAAADKDQKDIANNRLLTGTR
EDSEPQVFQGRLDSLAVATIKALTTVMHKSPAAKEVFKERIGYNHLYEVLVSLGQPSRHL
LKELMNMAVEGEHSSVGLLGISNVEPLLLLAQWLPELDSPELQLFTADWLRRLCCLDRRT
RAVCVNAAMPLRLLATLERPGRLHRASAESLLALLGALGAQSLGAAELRAFLRLLRAPEA
GGGGGGGGGGAHPYVGAGLRALLTMVRRPGLECAMQYFDLSPGMAGVVVPTVARWPGAAF
SFLAWLSLDQEQLDTPGKGDKRKQLYSFFTPGGTGFEAFISWAGLLVVAVCTKKEYATVM
LPDYCFCDSLWHSVGVVHVPGKRPFGQSLVYIYVDGQQKLSAPLKYPVMTEPFTSCCIGS
AGHRTTTPPPSQIPDPPFLTPTTPSGRTSLGGILSSAGGAWGGLLGGGGGGGGGGGGSVT
KLISAGTQDSEWGSPTSLQGQLGGVMVFHEALQPAHVKAVCSAGPNCISPFKTQEAELGD
LSTKLLLHYSPKACMNPICLDLSPNLLHGRLTGNKVVNWDIKDMINCVGGVHVLFPILEQ
LALVAPEQPSGEAPPGPEHISPDVTPPGDGDWVILPTNRASEARLEKNLVASFLLVLKHF
LQRHPINQESLLHAHGVASLGTLLQKLPAGSVDVSVLVAVQLLVEQVTYEKNPALLQQLQ
THLLFNCSTWSQGDFPTRIGHIQYMSTIVKDNRKQFRKRFGVQFLLDTIRMFYGRSSCRE
SDMSEEDVGTVRVSLCGLLKYYISKGMSQDEMHSILGYIAAIGDEEQLCSLLELLIGLLQ
TSPARDQLVLLLFEAGAADSCYALLLNTKYSDRLRELVFKLFERMLRCDRVYERSKQRLR
LREAGYSGLSLLFPDAHLNPSLVRCLLTQVLHTDNVVNYKDLMALLQLTHRAKPSVRLIV
CKRVHQLLQTQPDAAQQIARQQCWQDTLMRLFLRSGGGGGGGGGGPDAISNCSLDLGRSG
GGAARLDLPLERRGRAGSRDRHGGGGEEDRLSMGDGRSLDSLENGGGGDAVSLLDTPSSA
AATPRPSWGAAGGRGPGGLTLDLSHVQGYEGGESGGSTPSPLDGAARAFPAPGAGGERDA
TPSLGDDSFLFSDTASLGESFNGTERVDEELCGMLLDTVLWVMWRGVEGSDEGAWLERGQ
VFSALTKLGTANELLMPVDHIKLRLMERMLEWAVADNREAAAAALPQHTENAVRLLHAVQ
DFLQAEGLVSPALWSDKVLEETLTLMDCLMVWYASGDQWLRLSQVGLRLLLGFMAQEDPQ
VCAMATAKLNGILQTKVVASQDEACYLLGKVEGILRRALYSQGGDDDAIVTDTYSFLVPL
MRTLLSKVHRLLYMELHLPQLPDTSGGPTFFEDFQAYCRSPEWRVYLDKYIIPYMKQYEI
ETFSQGHETMALYWKECHEAYMVSLHRRERERGESKIRFQEQFVEPFSRRSRQENLRYNS
MLKQQHSQTAAALRQWKAARRGHVCERGPWADRQQDEMHWRVSSAENYSRMRLKLVRNYN
YDPHREASALRDNLGVQQQRVNAESLLLEAVKQVKVSDLEDDILDLPEEDPVAAAAAAGN
SQQAEAEEAGQKEKLVLGEDCELVTVVDVVPGRLELTTQHIYFYDGSQDKEEGVGYDFKW
PLSLIREVHLRRYNLRRSALEIFLIDQTTYFLNFKKEARNKVYSRMMLLRSLGVHATRSP
QELLKASGLTQKWVNREISNFDYLIQLNTIAGRTYNNLAQYPVFPWILSDYTSEELVLED
PRVYRDLSKPVAVLNERNAKAVREKYESFEDPTGTIDRFHYGTHYSNAAGVMHYLIRVEP
FTSLHIQLQSGRFDCADRQFHSIPATWQALMDNPNDVKELIPEFFYFPEFLENKNAYDLG
RLQISKERVDHVLLPKWAKSPEDFIYKHRKALESEHVSAHLHEWIDLIFGHKQRGPAAVE
ALNVFYYCTYEGAVDLDAITDEKERKAVEGMISNFGQTPCQLLKEPHPVRLSLEEAERRT
SRLDSCPLTVFKHLTELKSFFIEGISDNVPLIKAVVPKNQSHSFMTQGSPDIMVTVSQNC
LLGTHGWLPYDKNISNYFTFIKDPTVAHPKTQRVLAGPLAPGVELAAGLFVVSHDGRLLF
SGGHWDNSLRVTSLLKGKAVGQHIRHMDIVTCLATDHCGIHLISGSRDTTCMVWQVLQQG
GAPVGLCPKPVQVLYGHTDEVLSVSISTELDMAVSGSRDGTVIIHTVRRGQYMRCLRPPC
DSSLPLSILHLAVSWEGHLLVHTCLEGKASLKDKNALHLYSVNGKHLASEPLQEQVTDMS
VSQEYVVLGSEQGYLSIRDLYSLSLCAAPLAMRVPVRCVSVTKEQSHVLVGLDDGKLIVV
GVGKPAEMRPGPLIGRKLWGSSSRRLTQISAGETEYHQGGGGNQHGD
NT seq
8424 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgaagagaggctctacgaggtgtggatgctctactgcaacaagcgggaccct
gactatctcaagctgtggctggagatcttcatcggctcctacgagcgatgtctggacgtg
gacttcgagaagccgccttccaggccggacgaggtgcctccggtgctgtccctgctcccg
gacaacatcctgcaggtgctgcggcaccagctgctgcagtgcgtccagaaggccgcggag
ggcctggagccccagcagctggccctggccctgctgctgctcaagttcctcatcgtggtc
tgcagaaacctgtcaaacgtggaggagatcggcacctgctcctacatcaaccatgtgatc
aacatgaccacgctgtacatccagcagctgaaaagcaagaccaaggagaaggagatggcc
gaccagacacaggccgaggagtttgtccgtcacgcgctggccttctgcgagagcctctac
gacccctaccgcaactggaggcaccgggcgtgcggggagcgggtgggcactgcagagaga
agcagacagaagttcaaagccgctcccctcacagtggagttcgtccccttcttctaccag
tgcttccaggagagtgagcacctgaaggacagtctgaagtgctgcctgctccacctgttt
ggagccatcgtggccggcgagcagaggaacgctctgctggccatctccccggccaccatg
gaggtgctgatggccgtgctggccgacagcgccaccggtagccatggcgacccggacggc
gacccggactgggacggggaggcgccgggccgccgcgccctgctgacgctgggctgcctg
cgcgaggtggtccaccggctgctggcctccagctcggaccagcggcccgtggagatcgcc
tcggtgctcgacctctacttcaagctgctcaactcggacccggccgccgcggcgacgcag
catcagcaccagcaccaggggccggggaccaaccagacgcaggccaaggcccggcccgcg
ccgctcggccgccactgggagaagcgctttgtggcgctgcaagtgcacatgctagacacc
atcagggacatgttcctgtgctcggacaggccagtgcttcaggccatcttcctcaacagc
aactgcttcgagcacctcacgcggctactgcagaacagcaagctgattaacgccaggtgc
gctgcggcggacaaggaccagaaagatatagccaacaacaggttactgacaggaacgcga
gaggacagtgagcctcaggtgttccagggccgactggattcgctggccgtggcgaccatc
aaagccctgaccaccgtgatgcacaagtctccggctgccaaggaagtgttcaaggagcgg
atcggctacaaccacctgtacgaggtgctggtgtccctgggccagccgtcccggcacctc
ctgaaggagctcatgaacatggcggtggagggcgagcacagctcggtgggcctgctgggc
atcagcaacgtggagcccctgctgctgctggcccagtggctgccggagctggactccccc
gagctgcagctcttcacggccgactggctccgccgcctctgctgcctcgaccgccggacg
cgcgccgtgtgcgtcaacgccgccatgccgctgcgcctgctcgccacgctggagcggccc
ggccggctgcaccgcgcctccgccgagagcctcctggcgctgctgggggcgctgggcgcg
cagtcgctgggcgccgccgagctgcgcgccttcctgcggctgctgcgtgcgccggaggcg
ggcggcggcggcggcggcggcgggggcggggcccacccctacgtgggcgccgggctgcgg
gcgctgctgaccatggtgcggcggccggggctggagtgcgccatgcagtactttgacctg
tcgcccggcatggcgggcgtggtggtgcccacggtggcgcgctggcccggcgcggccttc
agcttcctggcgtggctgtcgctggaccaggagcagctggacacgccggggaagggcgac
aagaggaagcagctgtacagcttcttcaccccgggcgggacgggcttcgaggccttcatc
agctgggccgggctcctggtggtggcagtgtgcaccaagaaggagtacgccacggtcatg
ctgcccgactactgcttctgcgactccctctggcacagcgtgggcgtggtccacgtcccg
gggaagaggcccttcggccagagcctggtctacatctacgtggacgggcagcagaagctg
tcggcccccctcaagtaccccgtcatgaccgagcccttcacctcctgctgcatcggctcg
gcgggccaccgcaccaccacgcccccgccctcccagatccccgacccgcccttcctgacc
cccaccaccccctcggggcggacctccctggggggcatcctgtcgtcggcgggcggggcc
tggggcgggctgctgggcggcggcggcggcggcggcggcggcggcggcggctcggtcacc
aagctgatctcggcgggcacccaggacagcgagtggggcagccccacctcgctgcagggc
cagctgggcggggtgatggtgttccacgaggccctgcagcccgcgcacgtcaaggccgtg
tgcagcgccggtcccaactgcatatcccccttcaaaactcaggaggcggagcttggcgac
ctgtcgaccaaactgctgcttcactattcgcccaaggcgtgtatgaaccccatctgtctg
gatctgtcccccaacctgctccacgggcgcctgaccggcaacaaggtggtgaactgggac
atcaaggacatgatcaactgcgtggggggcgtccacgtgctcttccccatcctggagcag
ctggccctggtggcccccgagcagcccagcggagaggcccccccggggcccgagcacatc
agcccggacgtgaccccgccgggcgacggcgactgggtcatcctgcccaccaaccgggcc
tcggaggcccgtctggagaagaacctggtggcgtccttcctgctggtgctgaagcacttc
ctgcagagacaccccatcaaccaggagagcctgttgcacgcccacggggtggcctcgctg
ggcacgctgctgcagaagttgccggcgggcagcgtggacgtgagcgtgctggtggcggtg
cagctgctggtggagcaggtcacctacgagaagaaccccgctctgctgcagcagctccaa
acccacctgctcttcaactgcagcacctggagccagggggacttccccacccgcatcggt
cacatccagtacatgtccaccatcgtcaaggacaacaggaagcagttccgcaaaagattc
ggcgtccagtttctgctggacaccatcagaatgttctacgggaggagctcttgccgggag
agcgacatgagcgaggaggacgtgggcacggtgcgcgtctctctctgcggcctgctcaag
tactacatcagcaagggcatgtcccaggacgagatgcacagcattctgggatacatcgcc
gccatcggggacgaggaacagctgtgctccctgctggagctgctgatcggtctgctccag
accagcccggcccgtgaccagctggtgctgctgctgttcgaggccggggcggccgactcc
tgctacgccctgctgctcaacaccaagtactcggaccgcctccgggagctggtcttcaag
ctgtttgagcgcatgctgcgctgcgaccgcgtgtacgagcgcagcaagcagcgtctgcgt
ctgcgcgaggcgggctactccggcctgtcgctgctcttccccgacgcacacctcaacccc
agcttggtgcgctgcctgctcacccaggtgctccacacagataatgtggtgaactataag
gacctgatggctctgctgcagttgacccaccgggccaaacccagtgtacgactcatcgtg
tgcaagagggtgcaccagctgctgcagacgcagcccgacgcggcgcagcagatcgcccgg
cagcagtgctggcaggacactctgatgaggctcttcctgcggtcgggcggcggcggcggc
ggcggcggcggcggtcccgacgccatcagcaactgcagcctggacctgggccggtcgggc
gggggggcggcgcgcctggacctgcccctggagcggaggggccgcgcggggagccgggac
cgccacggcggcggcggcgaggaggaccggctgagcatgggcgacgggcgctcgctggac
agcctggagaacggcggcggcggcgacgcggtctcgcttctggacacgccctcctcggcc
gccgccacgccccggccctcctggggcgcggcggggggccggggccccgggggcctcacc
ctggacctgtcccacgtccagggctacgagggcggggagagcggcggcagcacgccgtcg
ccgctggacggcgccgccagggccttcccggcgccgggggccggcggggagcgggacgcc
acaccgtcgctcggcgacgacagcttcctgttcagcgacaccgcctcgctgggggagtcc
ttcaacggcacggagcgcgtggacgaggagctgtgcggcatgctgctggacacggtgctg
tgggtgatgtggcggggcgtggagggctcggacgagggggcgtggctggagcgcggccag
gtgttctccgccctcaccaagctgggcacggccaatgagctgctgatgcccgtcgaccac
atcaagctccgcctgatggagcgcatgctggagtgggcggtggcggacaaccgggaggcg
gcggcggcggcgctgccgcagcacacggagaacgcggtgcggctgctgcacgccgtgcag
gacttcctgcaggcggagggcctggtgagccccgcgctgtggagcgacaaggtgctggag
gagacgctcacgctcatggactgcctgatggtgtggtacgcctcgggggaccagtggctc
cggctgtcccaggtcgggctgcggctgctgctgggcttcatggcccaggaggacccccag
gtgtgtgccatggccacggccaagctcaacggcatcctgcagaccaaggtggtggcgagc
caggacgaggcctgctacctgctgggcaaggtggaggggatcctacggcgggcgctctac
tcgcagggcggcgacgacgacgccatcgtgacggacacctactccttcctggtgccgctg
atgcgcacgctgctgtccaaggtgcaccggctgctctacatggagctgcacctgccccag
ctgcccgacaccagcggcgggcccaccttcttcgaggacttccaggcgtactgccgctcg
cccgagtggcgcgtctacctcgacaaatacatcatcccgtacatgaagcagtacgagatc
gagaccttcagccagggccacgagaccatggcgctgtactggaaggaatgccacgaggcc
tacatggtcagcctccaccggcgggagcgggagcgtggagagagcaagatccgcttccag
gagcagtttgtggagcccttctcgcgccgcagtcgccaggagaacctgcgctacaacagc
atgctgaagcagcagcacagccagacggccgccgccctccgccagtggaaggcggcccgg
agggggcacgtctgtgagagaggcccctgggccgacaggcaacaggacgagatgcactgg
cgggtgtccagcgccgagaactactcgcggatgaggctgaagctggtccgcaactacaac
tacgacccgcaccgcgaggccagcgcgctgcgcgacaacctgggcgtgcagcagcagcgg
gtgaacgctgagtccctgctgctggaggcggtgaagcaggtgaaggtgagcgacctggag
gacgacatcttggacctgcctgaggaggaccccgttgccgccgccgccgccgccggcaac
agccagcaggccgaggcggaggaggcgggccagaaggagaagctggtcctgggggaggac
tgtgagctggtgacggtggtggacgtggtgcccgggcgcctggagctcaccacgcagcac
atctacttctacgacggcagccaggacaaagaggagggcgtgggttatgacttcaagtgg
ccgctgtcgttgatccgcgaggtccacctgcggcggtacaacctgcgccgctcggctctg
gagatcttcctcatcgaccagaccacctacttcctcaacttcaagaaggaggcgcggaac
aaggtgtacagccgcatgatgctgctgcgctcgctgggcgtgcacgccacccgatccccc
caggagctgctcaaggcctctgggctcacgcagaagtgggtaaaccgggagatctccaac
tttgactacctgatccagctcaacaccatcgcaggccgcacctacaacaacctggcccag
taccctgtgttcccctggatcctgtcggactacacctctgaggagctggtccttgaggac
ccccgtgtgtaccgggacctgtccaagcccgtggcggtgctcaacgaacgcaacgccaag
gccgtccgggagaagtacgagagcttcgaggaccccacgggcaccatcgaccgcttccac
tacggcacccactactccaacgcggcgggcgtcatgcactacctgatccgcgtggagcct
ttcacctccctgcacatccagctgcagagtggccggttcgactgcgccgaccgtcagttc
cactccatcccggccacgtggcaggccctgatggacaaccccaacgacgtcaaggagctc
atcccagagttcttctacttcccagagttcctggagaacaagaacgcctatgatctgggt
cggctgcagatctccaaggagagggtggaccacgtgctgctgcccaagtgggccaagtct
ccggaggacttcatctacaagcaccgcaaggcgctggagtcggagcacgtgtcggcccac
ctgcacgagtggatcgacctcatcttcggccacaagcagagggggcccgcggccgtggag
gccctcaacgtcttctactactgcacctacgagggggcggtcgaccttgacgccatcacg
gacgagaaggagcgaaaggcggtggaggggatgatcagcaactttggacagaccccctgt
cagctgctgaaggaaccccaccctgtgcgtctctctctggaggaggcggagcgcaggacg
tcccgcctggacagctgtcctctgaccgtcttcaaacacctgactgaactcaagtccttc
ttcatagagggaatcagtgacaacgtgccactgatcaaggcggtcgtaccaaagaaccaa
tcacattccttcatgactcagggcagccccgacatcatggtgacggtgagtcagaactgt
ctgctgggcacccacgggtggctgccctacgacaagaacatctccaactacttcaccttc
atcaaggaccccaccgtggcgcatcccaagacccagcgcgtgctggcgggccccttggcc
ccgggcgtggagctggcggcgggcctgttcgtggtgtcccacgacggcaggctgctgttc
agcgggggccactgggacaacagcctgagggtcacctccctgctcaagggcaaggccgtg
gggcagcacatccgacacatggacattgtgacgtgtctggccactgaccactgtggcatc
catctgatctccggttcccgggacaccacctgcatggtgtggcaggtcctgcagcagggc
ggcgctccagtggggctgtgccccaagccggtgcaggtgctgtacggacacacggacgag
gtgctcagcgtcagcatcagcacggagctggacatggccgtgtcgggctccagggacggc
acggtgatcatccacacggtgcggcggggccagtacatgcgctgcctgcggccgccctgc
gatagctccctgcccctctccatcctgcacctggccgtctcctgggagggacacctgctg
gtgcacacctgtctggagggcaaggcctccctcaaggacaagaacgcgctgcacctgtac
tcggtcaacgggaagcacctggccagcgagcccctccaggagcaggtgacggacatgagc
gtgtcccaggagtacgtggtgttgggcagcgagcagggatacctgtccatcagggacctg
tacagcctgtctctgtgcgcggcgcccctcgccatgcgcgtgccggtgcgctgcgtctcg
gtcaccaaggagcagagccacgtgctggtggggctggacgacggcaagctgatcgtggtg
ggcgtgggcaagccggccgagatgcgaccgggcccgctgattggtcgaaagctgtggggc
tccagcagccgccggctcacccagatctcggccggcgagaccgagtaccaccagggtgga
gggggcaaccagcacggggactga
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integrated database retrieval system
