KEGG   Gadus morhua (Atlantic cod): 115543409
Entry
115543409         CDS       T10832                                 
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
  KO
K11802  DDB1- and CUL4-associated factor 10
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115543409 (dcaf10)
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115543409 (dcaf10)
SSDB
Motif
Pfam: Beta-prop_WDR5 WDR55 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_EML Beta-prop_DCAF4 WD40_like RMC1_N NBCH_WD40 MIOS_WD40 Beta-prop_TEP1_C Beta-prop_Vps41 Omptin
Other DBs
NCBI-GeneID: 115543409
NCBI-ProteinID: XP_030211608
Ensembl: ENSGMOG00000013095
LinkDB
Position
5:20124968..20132306
AA seq 549 aa
MSSEQEDHQSDGEEEDEDDANRSAGHRAGEPEGEDRADDDEEDGDEGGEVADSSAGQVRE
DVCERSGASSPAGEVAASTTTSTSTTGMPDARCPSTATQEPKAAEGGNGGTSMVQPSGNG
LFLYLNNRTIRRGLFVDPARDNFNAMKNLYCSMSPAADSLNLSTQTHGAVFNLEYSPDGS
VLTVACEQTEVLLFDPVSSKHIKTLVEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRK
LNAKVCTLHGHASWVKNIEYDTNTRLLVTSGFDGNVITWDTNRFTEDGCPHKKFFHTRYL
MRMRLTPDCSKMLISTSSGYLLLLHQLDLTQSLEVGSYRMLRARRTPLTSDGGTSASRAS
GSSRHGNDSSKLHPHREGLSPRNSLEVLTPEIPGEKDRGNCITSLQLHPKGWATLIRCSS
NMDDQEWTCVYEFQDGPATRPPASPRCSLRLTHYIEEANVGRGYIKELCFSPDGRLICSP
YGYGVRLLAFDGRCGELSDSVPVRTSVLREVRSVYSHSDVVLTTKFSPTHCQLASGCLSG
RVCLYQPRF
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgagctccgagcaagaagaccaccagagcgacggggaggaggaggacgaggacgacgcg
aaccgtagtgcagggcaccgagccggggagcccgaaggagaggaccgtgccgatgacgat
gaagaggatggtgatgaggggggcgaggtggctgacagcagcgctggacaggttcgcgag
gatgtttgtgagcgcagcggcgcgagttcccctgcgggagaagttgctgcctccaccaca
acttctaccagcacaaccgggatgccggacgcccggtgcccgtccaccgccacccaggag
ccgaaggcggcagagggaggcaacgggggcacctccatggtgcagcccagcgggaacggg
ctgttcctgtatctgaacaacaggactatcagacggggactctttgtggacccggccagg
gacaacttcaacgcgatgaagaacttgtactgctccatgagcccggccgctgattctctg
aacttgagcactcagactcacggagctgtttttaacctggaatactctccggacgggtct
gtgctaaccgtggcctgtgagcagacagaagtgctgctgtttgatccagtctcatcgaaa
cacatcaagaccctggtggaggctcacgaagactgcgtcaacaacatcaggttcctggac
aaccggctgttcgccacctgctcggacgacaccaccatcgcgctgtgggacctgaggaag
ctgaacgccaaggtgtgcacgctgcacggccacgccagctgggtgaagaacatcgagtac
gacaccaacacgcggctgctggtcacctcgggcttcgacggcaacgtcatcacctgggac
accaacaggttcacggaggacggctgcccccacaagaagttcttccacacgcgctacctc
atgcggatgcgtctgaccccggactgctccaagatgctgatctccacctcctcgggctac
ctgctgctgctgcaccagttggacctcacccagtccctggaggtgggcagctaccgcatg
ctgcgggcccgccgcacccccctcacctccgatggtggaacgtctgcctcgagggccagt
ggatcttctcgccacggcaacgattccagcaagctccacccccacagagaaggcctgtcc
cccaggaacagcctggaggtgctgaccccggagatcccgggggagaaggaccggggcaac
tgcatcacctccctgcagctgcaccccaagggctgggccaccctcatccgctgttccagc
aacatggacgaccaggagtggacgtgcgtgtacgagttccaggacgggccggccacgcgg
ccccccgcctccccgcgctgctcgctgcgcctcacccactacatcgaggaggccaacgtg
gggcggggctacatcaaggagctgtgcttcagccccgatggccggctcatctgctcgccg
tacggctacggcgtgcgcctgctggccttcgacggccgctgcggcgagctgtcggactcg
gtgccggtgcgcacgtcggtgctgcgggaggtgcgctcggtgtactcccacagcgacgtg
gtgctcaccaccaagttctcccccacccactgccagctggcctcgggctgcctcagcggc
cgcgtctgcctctaccagccccggttctag

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