Gadus morhua (Atlantic cod): 115543611 Help Entry 115543611         CDS       T10832                                  Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04510   Focal adhesion gmh04517   IgSF CAM signaling gmh04518   Integrin signaling gmh04519   Cadherin signaling gmh04520   Adherens junction gmh04530   Tight junction gmh04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     115543611    04518 Integrin signaling     115543611    04519 Cadherin signaling     115543611  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115543611    04520 Adherens junction     115543611    04530 Tight junction     115543611   09142 Cell motility    04810 Regulation of actin cytoskeleton     115543611  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmh04131]     115543611   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:gmh04812]     115543611    04147 Exosome [BR:gmh04147]     115543611 Membrane trafficking [BR:gmh04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     115543611 Cytoskeleton proteins [BR:gmh04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      115543611 Exosome [BR:gmh04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    115543611   Exosomal proteins of colorectal cancer cells    115543611   Exosomal proteins of bladder cancer cells    115543611 SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_7 EF-hand_5 XisI U3_assoc_6 Motif Other DBs NCBI-GeneID:  115543611 NCBI-ProteinID:  XP_030211889 Ensembl:  ENSGMOG00000013597 LinkDB All DBs Position 5:complement(19885164..19945261) Genome browser AA seq 914 aa AA seqDB search MDPYDDDDDQVYMQQEDSWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIDNIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIAGKGVKLVSIGAEEIVDGNA KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPMTNLNTAFEVAEKYLDIPKMLDAEDIVGTARPDQKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTVPWLENR APENTMQAMQQKLEDFRDYRRQHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM VSDISNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTHGKEEMLQHR DYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRIC DQWDGLGNMTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNIAGSNPYTAIDPQEV NAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEM HGTLEDQLTHLRQYEKNIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEIENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGAEEFKACLISLGF DIANDSQKRTGMMDAEDYKTCLISMGYSLGEAEFSRIMSIVDPNRMGVVTFQAFIDFMSR ETADTDTADQVMASFKVLAGDKSYILADELRRELPPDQAEYCIARMAPYTGPDGAPGALD YMSFSTALYGESDL NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggacccatatgacgatgacgatgaccaggtgtacatgcaacaggaggacagctgggac cgggacctgctgctggacccggcctgggagaagcagcagagaaagacattcacagcgtgg tgtaactcccacctcaggaaggcagggacccagatagacaacatcgaggaggacttcagg gacggcctgaagctcatgctgctgctggaggtcatctcaggcgagcgcctggccaagccg gagagagggaagatgagggtgcacaagatctccaacgtgaacaaggcgctggacttcatc gccggcaagggggtgaagctggtgtccatcggcgcagaagagatcgtcgacggcaacgcc aagatgaccctgggaatgatctggaccatcatccttcgcttcgccatccaggacatctcc gtggaagagacttcagccaaagaaggactccttctgtggtgccagaggaaaacagcgccc tacaagaacgtcaacatccagaacttccacatcagctggaaggacggtcttggcttctgt gctctgattcatcggcatcgccccgagctcatcgattatggaaaactgcgcaaggatgat cccatgaccaacctgaacacagccttcgaggtggcagagaagtacctggacatccccaag atgctggatgcagaagacatcgtgggcaccgctcgcccggaccagaaggccatcatgacc tacgtctccagcttctaccacgccttctccggcgcccagaaggcggagacggcagccaat cggatctgcaaggtcctggcggtgaaccaggagaacgagcagctgatggaggactacgag aagctagccagtgatctgctggagtggatccggagaaccgtgccctggctggagaaccgc gccccggagaacaccatgcaggccatgcagcagaagctggaggacttccgagactaccgg cggcagcacaagccccccaaggtgcaggagaagtgccagctggagatcaacttcaacacc ctgcagaccaagctgcggctcagcaacaggcccgccttcatgccctccgagggcaagatg gtctcggacatctccaacgcgtggggcggtctggagggcgcggagaagggctacgaggag tggctgctgaacgagatccgccggctggagagactcgaccacctggccgagaagttccgg cagaaggcggccatccacgaggcctggacccacggtaaggaggagatgctgcagcaccgc gactacgagaccgcctccctgtccgagatcaaggcgctgctgaagaagcacgaggccttc gagagcgacctggcagcccaccaggaccgcgtggagcagatcgccgccatcgcacaggag ctgaatgagctggactactatgactctcccagtgtgaacgctcgctgccagcggatctgt gaccagtgggacggactgggaaacatgacccagaaacgcagtgaggccctgcagagaacc gagaagctcctggagaccatcgaccagctgtacctggagttcgccaagcgggccgcgccc ttcaacaactggatggagggcgccatggaggatctgcaggacaccttcatcgtccacacc atcgaggagatccagggcctgagcaccgcccacgagcagttcaaggccacgctgcccgag gcggacaaggagcggcaggccatcctgggcatccacaacgagatcgccaagatcgtgcag acctaccacgtcaacatagccggcagcaacccctacaccgccatcgacccccaggaggtc aacgccaagtgggacaaggtgaggcagttggtgccccagagggaccaggccctgatcgag gagcacgcgcggcagcagaacaacgagaggctgcgccggcagttcgctaaccaggctaac gtcatcgggccctggatccagaccaagatggaggagatcggccgcatctccatcgagatg cacggcaccctggaggaccagctcacgcacctgcggcagtacgagaagaacatcgtcaac tacaagcccaagatcgaccaactggagggagaccaccagctcatccaggaggccctcatc ttcgacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctg ttgaccaccatcgcccgcaccatcaacgagatcgagaaccagatcctgacccgcgacgcc aagggcatcagccaggagcagatgaacgagttccgcgcctccttcaaccacttcgaccgg gaccactcaggcacgctgggggccgaggagttcaaggcctgcctgatcagcctgggcttc gatatcgccaacgattcacagaagagaacagggatgatggatgctgaggactacaaaacc tgcctcatctccatgggttacagcctgggagaagcggagttctcgcgcatcatgagcatc gtggaccccaacaggatgggcgtggtcaccttccaggccttcatcgacttcatgtcccgc gagacagccgacacggacaccgccgaccaggtcatggcctccttcaaggtcctggccggg gacaagagctacatcctggcggacgagctgcggcgggagctgcccccggaccaggccgag tactgcatcgcccgcatggccccgtacacggggcccgatggggcccccggggccctggac tacatgtccttctccactgcgctgtatggcgagagcgacctctga

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