Gadus morhua (Atlantic cod): 115543719
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Entry
115543719 CDS
T10832
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115543719 (dcaf5)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115543719 (dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SPT8
SR-25
New_glue
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
115543719
NCBI-ProteinID:
XP_030212077
Ensembl:
ENSGMOG00000008329
UniProt:
A0A8C5B883
LinkDB
All DBs
Position
5:complement(19952685..19962862)
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AA seq
909 aa
AA seq
DB search
MQQNRDSADRQPSHVDGGTVGEVRRKGKMKELKGCGMRSCLGFLSQRRLRGQPLMKEDFQ
RRRLAGCTSLFKKDLLGHFGCVNAIEFSNNGGDWLVSGGDDRRVLLWHMEKAIHGRTKPV
KLKGEHLSNIFCLAFDSTNTKVFSGGNDEQVILHDVERGETLNVFLHIDAVYSLSVSPVN
DNVFASSSDDGRVLIWDTREPPTGEPFCLASYPSAFHSVMFNPVEPRLLATANSKEGVGL
WDIRKPRSSLLRYGGNMSLQSAMSVRFNSTGTQLLALRRRLPPVLYELHSRLPSYQFDNQ
GYFNSCTMKSCCFAGDKDQYILSGSDDFNLYMWKIPKDPAAGRVVNGAFMILKGHRSIVN
QVRFNPHTYMICSSGVEKVIKLWSPYQQPDSLGDLEGRVEDRSRSLYTHEEYISLVLNSG
SGLSHDYVSQSIQEDPRMMAFFDSLVRREIEGWSSDSDSYLSDGAILQLHARGRRSTRPA
ATAAAASVASAAVAAAVAAATATSAAAAGNAASSSAAAAAGRHGSNDNAAGGGSSSSSSL
VGPDASGGEEPVAVEGAGRQRRRGRRQRHHSGFLLDLVNEDSDSSEFWLDPMPRPRSPSP
RGNAALTSTPSSSPSVPGGASSSSSSSSSSSSSSSSSSSSSSDGGAQQRQRLRNAKRSVL
RRRRLLAAARAGERSDSAQALFSALDSCGYPEITVEDPASAGSSSSSSSSSSSSSSGEEQ
RRARRRRKRRRRAGSRGEDGPLSPSDFVCSSPVMSPRSPGGDLLLLHHHHQPPRPEDDEE
EEEGGGGPRPRSRAGVRVSGANRGALESSDSMEECVGVRGAVNITRVSPCPLSPGMNGQH
RTPLSDLGPGGSAGPDPGGPREEKMGVRLQKEEGPSSSKAQAQSTLKRTYTCAREGEAGA
SPTEKKTKT
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaaccgcgatagcgccgacagacagccgagccatgtcgacgggggaacagta
ggagaggttcgcaggaaggggaaaatgaaggagctgaagggatgcggtatgcgctcttgc
ctgggctttctgtcccagagacggctccgtggacagcccctgatgaaggaggacttccag
agacgcaggctggccggctgcacaagtctcttcaagaaggacctgctgggacacttcggc
tgtgtcaacgccattgagttctccaacaacggaggggactggttggtgtccggtggagac
gaccggcgtgtgctcctatggcacatggagaaagccatccatgggcgcaccaagcctgtc
aaactgaaaggagagcacctgtccaacatcttctgcctggccttcgacagcaccaacacc
aaagtgttctctggaggaaatgacgagcaggtgatcctacacgacgtggagaggggggag
acgctgaacgtgttcctgcacatcgacgcggtgtacagcctgtccgtcagccccgtcaac
gacaacgtgttcgccagctcgtcggacgacggccgcgtcctcatctgggacacccgcgag
ccgccgaccggggagcccttctgtttggccagctacccgtccgccttccacagcgtcatg
ttcaaccccgtggagccccgcctcctcgccaccgccaactccaaggaaggcgtcggcctc
tgggacatccgcaagccccgcagctccctgctccgctacggcgggaacatgtccctgcag
agcgccatgagcgtgcgcttcaacagcacgggcacccagctgctggcgctgcggcgccgc
ctgccgcccgtcctctacgagctgcactcccgcctgcccagctaccagttcgacaaccag
ggctacttcaactcctgcaccatgaagagctgctgcttcgccggagacaaggaccagtac
atcctgtcgggatctgatgactttaacctctacatgtggaagatccctaaagaccctgcg
gctggccgggtggtgaacggggccttcatgatcctcaaaggccaccgctccatcgtcaac
caggtccgcttcaacccccacacctacatgatctgctcctcgggcgtggagaaggtcatc
aagctgtggagcccctaccagcagcccgacagcctgggggacctggaggggcgcgtggag
gaccggtcccgctccctctacacccacgaggagtacatcagcctggtgctgaacagcggc
agcggcctgtcccacgactacgtcagccagtccatccaggaggacccgcgcatgatggcc
ttcttcgactcgctggtccgccgcgagatcgagggctggagctccgactcggacagctac
ctgagcgacggcgccatcctgcagctgcacgcccgcggccgccgctccacgcgccccgcc
gccacggccgccgccgccagcgtggcgagcgccgccgtcgccgccgccgtcgccgccgcc
acggcgacctccgccgccgccgcgggcaacgccgcctcgtcctccgccgccgccgccgcc
ggtcgccacggcagcaacgacaacgccgccggaggggggagctcgtcgtcctcctcgctg
gtggggccggacgcctccggaggggaggagccggtggcggtggagggggcggggcgtcag
aggaggcggggccggcggcagcggcaccactcggggttcctcctggacctggtgaacgag
gactcggactccagcgagttctggctggaccccatgccccgcccccgctcgcccagcccc
cgggggaacgccgccctgaccagcacccccagctcctccccctcggtgcccgggggggcg
tcgtcctccagctcctcgtcctccagctcctcctcctcgtcctcctcctcctcctcgtcc
agcagcgacgggggggcgcagcagaggcagcggctccgcaacgccaagcgcagcgtgctg
cgccgccgccgcctgctggccgccgcgcgcgccggcgagcgctcggactccgcccaggcg
ctgttctcggcgctggactcctgcggctacccggagatcaccgtggaggacccggcgtcc
gcgggctcgtcctcctcgtcctcctcctcctcctcttcctcctccagcggggaggagcag
cggcgggcccggaggaggaggaagaggaggcgcagggcgggctcccgcggggaggacggg
cccctcagcccgtcggactttgtgtgttccagtccggtcatgtccccgcggagcccgggg
ggcgacctcctcctcctccaccaccaccaccagcccccccgcccggaggacgacgaggag
gaggaggagggcggggggggccccaggccgcgctcccgggccggggtccgggtcagcggg
gccaacaggggggccctggagagctcggacagcatggaggagtgtgtcggcgtgcggggc
gccgtgaacattacccgggtgtccccgtgccccctgagccccgggatgaacgggcagcac
cggacacccctgtcggacctgggccccgggggctctgcggggccggaccccgggggcccc
agggaggagaagatgggagtcaggctccagaaggaggagggcccctcctcatccaaagcc
caagcacagagcactctgaaacggacgtacacctgcgcccgggagggcgaggcgggggct
tcccccacggagaaaaagactaagacttga
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