KEGG   Gadus morhua (Atlantic cod): 115543958
Entry
115543958         CDS       T10832                                 
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04137  Mitophagy - animal
gmh04140  Autophagy - animal
gmh04148  Efferocytosis
Brite
Transcription factors [BR:gmh03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    115543958 (hif1a)
SSDB
Other DBs
NCBI-GeneID: 115543958
NCBI-ProteinID: XP_030212535
Ensembl: ENSGMOG00000010900
UniProt: A0A8C5AVN3
LinkDB
Position
5:12715643..12734800
AA seq 774 aa
MDTGIVPEKKRVSSDRRKEKSRDAARCRRGKESEVFYELAQELPMPHSVRANLDKASIMR
LTISYLRMMKLLGTDGPVAEAAPEESELGARLSGSYLKALEGFLMVLSEDGDMIYLSENV
HKCLGLAQFDLTGQSVFDYTHPCDQEELREMLVHKTGSKKTKEPSTERTFFLRMKCTLTS
RGRTVNVKSATWKVLRCSGHVRVFKPPAEEEKAPPSRPPVPYLVLICDPIPHPSNIEVPL
DTKTFLSRHTLDMKFTYCDERITELMGYDPEHLMNRSVYEYYHALDSDHLTKTHHNLFAK
GQVSTGQYRMLARGGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLIFSLEQT
EDLKPVKEEKKGPQEIEEEEEEQEEIEQEEVMETVCHADETVVQAATLQVLPSEEKPPEV
DVVQIFTQAPEGPPLVSLYDQLKEEPEALTLLAPAAGDTFISLDFSCPDSEMNLLEDAPL
YNDVMLPSTSEHLALPLTDLTPSESPRSTPSPPAEQEVPCGRAGGHTQASSPPVPDSPLN
LGFPGDMELSSDFDLVEKLFAVDTKPKTPFTTQAIEDLDLEMLAPYIPMDDDFQLRSLAP
DEHLPCEPPPVRPPATSAPLHSYLSSPSGRTGGPGPLGPVATPNAAPLLSKRNPQLEKEV
SLKMLAAVNAQRKRKLGDVPLTDVFAAGALLQGPCEQGKKLKVSEVPVMLSHRYVLLLPS
DLASLLLGPSSEGGSPAITLPQLTRYDCEVNAPVQGRQLLLQGEELLRALDQVN
NT seq 2325 nt   +upstreamnt  +downstreamnt
atggacactggaattgtccctgaaaagaaaagggtgagctcggaccgcaggaaggagaag
tctcgggatgcggcgcgctgccggcgggggaaggagtcggaggtgttctacgagctggcc
caggagctgcccatgccccacagcgtccgggccaacctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcatgatgaagctgctcggcaccgacgggcccgtggcggag
gcggccccggaggagagcgagctgggggcccggctgagcggctcctacctgaaggccctg
gaggggttcctcatggtgctgtcggaggacggagacatgatctacctctcagagaacgtc
cacaagtgcctgggcctggcacagtttgacctgaccgggcagagcgtgttcgactacacg
catccgtgtgaccaggaggagttgagagagatgttggtccacaaaacaggctccaagaag
accaaggaacccagcaccgagcgcaccttcttcctccgcatgaagtgcaccctcactagc
aggggccgcaccgtcaacgtcaagtcggccacctggaaggtgctccggtgctccggccac
gtgcgcgtgttcaaaccccctgcggaggaggagaaggccccaccctccaggcccccggtg
ccctacctggtgctgatctgtgaccctatcccgcacccctccaacattgaggtgcccctg
gacaccaagaccttcctgagccgacacacgctggacatgaagttcacctactgcgacgag
aggataacggagttgatgggctacgacccggaacacctgatgaaccgctctgtgtacgag
tactaccacgccctggactcggaccacctcaccaagacccaccacaacctgttcgccaag
gggcaggtcagcacggggcagtaccgcatgctggcccggggggggggctttgtgtgggtg
gagacgcaggccaccgtcatctacaacaacaagaactcccagccgcagtgtgtggtctgc
gtcaacttcgtgctcagcggtatccaggaggagaagctgatcttctctctggagcagacg
gaggacctgaagccggtgaaggaggagaagaaagggccgcaggagatagaggaggaggag
gaggagcaggaggagattgagcaggaggaggtgatggagacggtgtgccatgccgacgag
actgtggtccaggccgcgactctccaggtgctgcccagcgaggagaagcctccagaggtg
gacgttgttcagatcttcacgcaggcccctgagggcccgcccctggtcagcctgtacgac
cagctgaaggaggagcccgaggccctcaccctgctggccccggccgcgggagacaccttc
atctccctggacttcagctgccctgactccgagatgaaccttctggaggacgcgcctctc
tacaacgacgtgatgcttccctccaccagtgagcacttggccctgcctctgactgacctg
acccccagtgagtccccccgctcaacccccagcccccccgcagagcaagaggtgccctgc
ggccgagccggcggccacacgcaggccagcagccccccggtgcccgacagccccctgaac
ctaggcttccccggggacatggagctcagctcggacttcgacctggtcgagaagctgttt
gccgtcgacacgaagcccaagacccctttcacgacccaggccatcgaggacctggacctg
gagatgctggcgccgtacatccccatggacgacgacttccagctgcgctcgctggcccct
gacgagcacctgccctgcgagccgccgccggttcggccgccggccacctccgcaccgctc
cacagctacctgagctcaccctcgggccgcacggggggccccgggcccctggggccggtg
gccacgcccaacgcggcccccctgctctccaagaggaacccgcagctggagaaggaggtg
tctctgaagatgctggccgccgtgaacgcccagcgcaagaggaagctgggcgacgtcccg
ctgacggatgtctttgcagcgggggcattgcttcagggcccgtgtgagcaggggaagaag
ctgaaggtgtcggaggttcctgtgatgctctcccatcgctacgtcctgctgctgccgtca
gacctggccagcctcctcctgggcccctcctcggagggcggcagcccggccatcaccctg
ccccagctcacccgctacgactgcgaggtcaacgcgcccgtacaagggcgccagctcctg
ctgcagggggaggagcttctgcgagctctggaccaagtcaactag

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