KEGG   Gadus morhua (Atlantic cod): 115544000
Entry
115544000         CDS       T10832                                 
Symbol
six1
Name
(RefSeq) homeobox protein SIX1
  KO
K15614  homeobox protein SIX1
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmh03000]
    115544000 (six1)
Transcription factors [BR:gmh03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    115544000 (six1)
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 YdaS_toxin Phage_mat-A HTH_72
Other DBs
NCBI-GeneID: 115544000
NCBI-ProteinID: XP_030212598
Ensembl: ENSGMOG00000010826
LinkDB
Position
5:complement(12627974..12630123)
AA seq 284 aa
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDHSSVLLLQGNMSH
PGASSYPMSGLGGPQSVHGLHGHPHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtctatattaccgtccttcggttttacgcaggagcaagtggcctgcgtgtgcgaggtc
ctccagcaaggggggaacctggagcggctagggcggttcctctggtccctgcccgcctgc
gaccacctccacaagaacgagagtgtcctcaaagccaaggcggtggtggccttccaccgg
ggcaacttcagggagctctacaagatccttgagagccaccagttctcgccgcacaatcac
ccgaagctgcagcagctgtggctgaaggcgcactacgtggaggcggagaagctgcgtggc
cggccgctcggagcggtggggaagtaccgcgtgaggaggaaattccccctgccacgcact
atatgggacggcgaggagaccagctactgctttaaggagaagtccaggggcgttctgagg
gaatggtacacgcacaacccttacccgtctccccgggagaagcgggagctagccgaggcc
accgggctgaccaccacgcaggtcagcaactggttcaaaaaccggcgccagagggaccgg
gcggccgaagccaaagaaagggaaaacagtgaaaacaacaacagcggcaacaacaaacag
aaccagctgtctccgctggacggcgggaagtcgctcatgtccagctcggaggacgagttc
tcccccccgcagagccccgaccacagctcggtgcttttgctccaggggaacatgtcccat
cccggggcctcgtcctaccccatgtcggggctcggagggccgcagtcggtccacggcctg
cacggacacccgcaccagctccaagactcgttgctgggaccgctgacttccagccttgtg
gatctaggctcgtaa

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