KEGG   Gadus morhua (Atlantic cod): 115544200
Entry
115544200         CDS       T10832                                 
Name
(RefSeq) tubby-related protein 4-like
  KO
K24720  tubby-related protein 4
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gmh04990]
    115544200
Domain-containing proteins not elsewhere classified [BR:gmh04990]
 Other domain-containing proteins
  Tubby family proteins
   115544200
SSDB
Motif
Pfam: Beta-prop_WDR35_TULP_N Tub ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_RIG_2nd Ribosomal_60s Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 115544200
NCBI-ProteinID: XP_030212910
Ensembl: ENSGMOG00000019415
LinkDB
Position
5:3853268..3867635
AA seq 1868 aa
MSRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDST
ESDTDSDDNVLPLVRSIRPLLTVSFLSGDISLMNNYDDLSPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHSADTDSLCASNTRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRL
FLACGPALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIK
PPIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRI
SKLRPEFVIMDPKMDGKMEEVCVNPMISYTDSCNGSDSSDIELTDEWVGKKSPKLSRGNR
SPKLFRMNMESRKSPKLSRANQEGQRSPRLPSKKAPVRSPSLTRREFCMDGITEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTATAAVAAAAAAAAAVPPADHSQDSVAAAPYPVPTRYSNPGQAIFSGMDMG
PPLLAVTPPLPPPPHHPPPEPHPHPPHHPQRSRAQQLHHQPPSKQSQQMQLQQQKTHHQQ
LLQQPPPHHHHQQQTQQQHLHQQQQQQQQQQHLHQQQQQQQHLHQQQQQQQQQHQQQQQQ
QHQQHQQQLQQLHHQQQLLHQQQQQAQHQQLQQSQQHAANPQQLHHQQQQQLHQQQMQIQ
HEQMQQQQQQIRLQIQEMRQQQQQLQQQHQQLQQQHQQMQQQLKMQMALPPPPSGYPTLS
LQQLHLLPPMPPPTAEPGLDRAEQHGHGHGSKPSLPRSLPPSFIDADGTVEIQMRKMNPP
PPYPGTTVTVTASGVSSSAIPQTLITNCDSPSVLAPDPCLKKDEFLLHPVTLQYPTPLGY
ERITTFDSSGNVEEVCRPRRRLIRNQNTYALQGISGSATLKVTSSDSKKIQLPYSSATLS
RLSVPRYSIPSGDPPPYPDPANQVPATLPPPQRIDNTLIHATLRRDRRDQALKVPQMMES
SRTLPTKSKVNSALALSYQQRIPTALYTCTQCSSNNSSTNVSVSGGGTSSSGIAGGTVVR
QDFPPGKGAHHSTIIVHSKSTSPLTSQSSQYNLLGPVDNSRDRTVYVNSAFTEDEAVNQQ
CHLEKSLRHLTLGDVGLTVKRPPPYQWDPSSSTSTEHFWLAPEQTMLAPPPPPHKPPPLL
FSQAPHLDMARLPFVFTTKPPNSPSTSTLTFPSGYQISLSPFPPGMGHSVTSTLQNLQST
SQQSETIGSSPFAQQGASLVLPPGYPSSLANLACCPLPPMYPGASSCAGLQLHPVNLHPW
NPYPCPPPPPMQDPPSHPAPPLPTKTHQKLEKPILSPPPPTMPPPPPPLPPPPPPTEPPP
PPKGTTEDHAESANNFLEPPSLNDSPVPRESERVSKKSRKRLDSRAEEANMPAVSEGKGR
KEGRALSDFNSLISSPRLGGRDKKKPKGQREQLNKGKKMMSRTTNEFQDSSESEPELFIS
GDELMNQNQSSKKSWKNKRSLRMASELEEIKCRKANEREDRSLGSQGFVYVMANKQPLWN
EATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVAL
ANVTQRLK
NT seq 5607 nt   +upstreamnt  +downstreamnt
atgtccaggaactatgagcccgggcactcggtagggatgctggcggccgtggagcacggc
cccatcctctgcagcgactccaacatcctgtgcctgtcctggaagggccgcgtgcccaag
agcgagaaggacaagcccgtgtgccggcggcggtactacgaggagggatggctcgccacg
ggcaacggccgcggcgtggtgggcgtcaccttcacgtccagccactgccggcgggaccgc
aacacgccgcagaggatcaacttcaacctgcggggccacaacagcgaggtggtgctggtg
cgctggaacgagcccttccagaagctggccacctgcgacatggagggagggatcttcgtc
tggatccagtatgaaggacgatggtcggtggagttagtgaacgaccgtggagcccaggtg
agtgacttcacctggtcccacgacggcacccaggcgctgatcgcgtaccgggacggcttc
gtgttggtgggctccgtcagtgggcagcgccactggtcctccgagatcaacctggagagc
cagatcacctgcgggatctggactcctgacgaccagcaggtgctgttcggtactgcggac
ggacaggtgatcgtcatggactgccatggaaggatgctggcccacgttctgctgcacgag
tcagacgggatcgtgagcatgtcctggaactgcccggacttccttgtggaggacagcact
gagagtgacacggattctgatgacaatgttctgccattagtgcgaagcatcagacccttg
ttgacggtgagcttcttatcaggagacatcagtttaatgaacaactacgatgacctctcg
cctaccgtgatccgctcgggcctgaaagatgtggaagtccagtggtgctcccagggcgac
ctgctggctgtggccggcatggagagacactctgcagacaccgactctctctgcgcctcc
aacaccaggaacgcactggtgaagttctacaacgtccaaggggaacacatctacaccctg
gagacgcccgcgcagaggcccatcactaccatctgctggggtcaccgggactcacggctg
ttcctggcgtgcgggccggcgctgtacgtggtgcgtgtggagcaccgcgtggccagcctc
cagttgctatgccaacagggcatcgccagcgcactgcgcgaggagagggacgtggggaag
ctgaacatgccctccctgctctgctcttacgtcaccaccgccttcattcccaccatcaag
cctccgatcccggaccccaacaacatccgagactttgtcagctaccccaccgccggcaac
gagcggctgcactgcaccatgaagcgtgcagaggacaaccctgaggcgggggggccctgc
tacacgctgtacctggagcacctggggggccttgtgcccatcctgaagggccggcgcatc
agcaagctgcgccccgagttcgtcatcatggaccccaaaatggatggcaaaatggaggag
gtgtgtgtgaaccccatgatctcctacactgacagctgcaacggttctgactccagtgac
atcgagctgacggacgagtgggtcgggaagaagtccccaaagttgtcccgtggaaacagg
tctcccaaactcttcagaatgaacatggaatcccggaaatctcctaagctctcacgagca
aaccaggagggccagcgatcaccacgcttaccgtcaaagaaggctccggtccgctccccc
agtctgactcgccgggaattttgtatggacggcatcacagagcacaactacctcgctcaa
gttacatccaacatatggggaaccaagtttaaaattgtcgggcttgcctcttttctgcct
gccaatcttggtgcagtcatctacaaaaccagtttactgcatctacaaccgaggcagatg
accatctaccttccggaagtgaggaagatctccttagacttcatgagtctgcctgttttc
aaccccaacgtcttcagtgaggatgaggacgacctgccggtgatgggtccatcaggagtg
gcgggagacaaccctccctgcacagtcaacatccccatcgctcccatccacagccccgcc
caggctatgtcacctactcagagtattggccttgtccagtctcttttagccaatcagaac
attcagctcgatgtcctgaccaatcccacggccacagcagcggtggctgctgctgcagcg
gctgcagctgccgttccgcccgccgaccacagccaagattcggttgcggcggcgccgtat
ccagtgccgacccggtactcgaacccgggtcaggccatcttcagcggcatggacatggga
ccccctctcctggccgtcactcctcctcttccgcctcctccccaccaccccccacccgag
ccgcaccctcaccctccccaccacccccagcgctcccgggcccagcagctgcaccatcag
cctccctccaagcagtcgcagcagatgcagctgcagcagcagaagacgcaccatcagcag
ctgcttcagcagccgccgccacaccaccaccatcagcaacagacacagcaacaacatctg
catcagcagcaacaacagcagcaacaacagcagcatctccatcaacagcagcagcagcag
cagcatctacatcaacaacaacagcagcagcagcaacaacaccaacaacagcagcagcag
cagcatcaacaacaccaacaacaactgcagcagctgcaccaccagcagcaactcctgcac
caacagcagcagcaggcgcagcatcagcagcttcagcagagccagcagcatgccgccaac
ccgcagcaactccaccatcagcagcagcagcagctgcaccagcagcagatgcagattcag
cacgagcagatgcagcagcagcagcagcagatccgcctgcagatccaggagatgcggcag
cagcagcagcagctgcagcagcagcaccagcagctgcagcagcagcaccagcagatgcag
cagcagttgaagatgcagatggcgctgccccctcctccgtccgggtatccaacgctctcc
ctgcagcagctgcacctcctgccgccgatgccccccccgaccgcggagcccggactggac
agggcagagcagcacgggcacgggcacgggtccaagcccagcctccctcgctccctgccg
ccctccttcatcgacgccgacggcacggtggagatccagatgaggaagatgaaccctccc
cctccgtaccctggcaccacggtgacggtgacggcgtcgggggtctcgtcgtcggccata
ccgcagaccctcatcaccaactgcgacagccccagcgtactggctccggacccctgcctg
aagaaggacgagttcctgcttcacccggtcaccctgcagtaccccacacccctgggctac
gagaggatcaccacctttgacagcagcggcaacgtggaagaggtgtgccgcccgcggaga
cgcctcattcgcaaccagaacacctacgccctccagggcatcagtggctccgccaccctc
aaggtcacgtcgtcggacagtaagaagatccagctgccctacagctccgccactctgagc
agactctctgtgcctcggtactccatccccagtggagatccgcctccttaccccgaccca
gccaatcaggtccccgctacgctcccgcctccccagaggatcgacaacaccctcatccac
gccacgctgcgccgggaccgcagggaccaggctctcaaagtgccgcagatgatggagagc
tcacggacgcttcccaccaagtcgaaggtgaacagtgcgctcgcgctctcctaccagcag
aggatacccaccgctctgtacacctgcacacagtgcagcagcaacaacagcagcactaat
gttagtgtcagcgggggcgggaccagcagcagtggcattgcagggggcacagtggtgcgg
caggacttccccccggggaaaggagctcaccatagcacaattatcgtgcactccaagagc
acctcccccctcacctcccagtcctcccagtacaatctgctgggtccagtagacaacagc
agggacagaaccgtgtacgtcaactcagccttcaccgaggacgaggcggtaaaccagcag
tgccatctggagaagtcgctgcgccatctgaccctcggcgacgtcggtttgacggtcaaa
cgtcctccaccctaccagtgggacccgtcgtcctccacctccacagaacacttctggctc
gccccagagcagaccatgttagcgcctccgccgccgccacacaaacccccacccctcctc
ttcagccaagccccgcacctggacatggcccggcttccctttgtgttcaccaccaagcct
ccgaacagccctagcacaagcacactgacctttccctccggctatcagatatccctctcg
ccgtttccccctggcatgggtcatagcgtgacgtcgacgctgcagaacctccagagcacc
tcgcagcagagcgaaacaatcgggtcgtcgccttttgcacagcagggtgcgagtctggtc
ctccctccgggctacccttccagcctcgctaacttggcttgctgccctctaccccccatg
tacccaggggcgagctcctgtgctgggctccagctgcaccctgtgaacctacacccctgg
aacccctatccctgccctcccccgccgccaatgcaggaccccccctcccacccagcgcct
cccctgcctaccaaaacccaccagaagttagaaaagcctatcctttcgccgccacccccg
accatgccacctcctcctcccccactccctcccccgccacctcccacagaacccccgccg
ccacccaagggcaccacggaggaccatgcagagtctgccaacaacttcctggagccgccg
tcccttaacgacagccccgtgccacgggagtctgagcgtgtcagcaagaagagccgcaag
aggctggacagccgggccgaggaggccaacatgcccgccgtctccgagggcaaaggaagg
aaggagggccgcgcactgtccgacttcaacagcctcatctccagcccccggctcgggggg
agggacaagaagaagcccaagggccaaagagagcagctcaacaagggcaagaagatgatg
agcaggaccaccaacgagttccaggacagctctgagagcgagccggagctgttcatcagc
ggggacgagctgatgaaccagaaccagagcagcaagaagagctggaagaacaagaggagt
ctccggatggccagcgagctggaggagatcaagtgccgcaaggccaacgagagggaggac
cgcagcctgggcagccagggcttcgtgtacgtcatggccaacaagcagccgctgtggaac
gaggccacccaggtgtaccagctggactttggtggacgcgtcactcaggagtctgcaaag
aactttcagatcgaactggacggcagacaggtgatgcagtttggacggatcgacggcaac
gcctacatccttgatttccagtatcctttctctgctgtgcaggcctttgctgttgccttg
gcaaatgtaacgcagcggctcaagtga

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