Gadus morhua (Atlantic cod): 115544245
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Entry
115544245 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115544245
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GFIT
Other DBs
NCBI-GeneID:
115544245
NCBI-ProteinID:
XP_030212969
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Position
5:complement(4964509..4976066)
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AA seq
1087 aa
AA seq
DB search
MAAREKLRDNPMRDQRNAHAFLDKELKKLWRIIFLDYPQYSESQKAEEEEKVDSKNEEQR
RRATEGVVDITLLCLMEMNQEELADKLWRGTVAVMCKGKIKSHLKEKFRFVFEGIAKAGQ
PTGLNDFYIELFITDRGNEEANKEHEVRLIETTSRKSANQETPIKCEDIFKPLPTRQGQP
IRTIMTTGVAGIGKTVLTNKFTLDWAEGKANQDIDFTFAFTFRALNLLIAKEFSLVELLH
HFFIETKEAEICRYDRFQVVFILDGLDECRLPLDFQNNQTWTDVTKPTSVDVLLTNLIMG
DLLPSARIWITTRPAAANQIPAECVDMVTEVRGFTNPKKEEYFRKRFREETLASTIISHI
KKSRSLYIMCHIPVFCWISATVLEDIFKTSQRGKEMPKTVTQMYIHFLRVQSIQEDRKYH
GRAETDQDWSSESREIIFSLGKLAFNQLEKGNLIFYEADLAECGIDIRAASVYSGVFTQI
FKQECGLYQDRVFCFVHLSIQEFLAALHVFLYLIDTGVNLLSNEQPISWEDKLIFLYQSA
VDKALQSENGHLDLFLRFLLGLSLENNQIILRGLLRQTVSSQWTNEETVSYIKEKIGRDL
SPERSINLFHCLNELNDRSLVEEFQYLTSGSLSRESLSPSQWSALVFILLSSEEELDVFD
LKKYSASEESLLRLLPVVKASKISRLNGCHLSERCCEALASVLSSNSSSLRELYLSNNEL
QDSGVKLLSAGLGSPHCTLETLRLNGCHLSERCCEALASVLSSNSSSLRELDLSTNDLQD
SGVKLLSAGLGSPHCTLETLRLSGCLITQEGCASLASALSSNPSHLRVLDLSYNHPGDSG
VKLLSAGLEDPRWRLDTLSVEHGGVWRLKPALKKYASELKLDPNTANGRLSLSMDDRKVT
WIGEDQSYPDHPERFDSHHHLLCREGLTGRCYWEVKREGEVYIGVTYRGITRKGSGDDSW
LGWNNNSWSLSCYDDHYTALYNSSETAIRLAPAGSNRVGVYLDRPAGTLSFYRVSPDVGG
SSDTLTHIHTFQSTFTQEDLLPGFYLWDGASVSLCQFDLAPRDRANRRTSRMHRESEREG
RRERETE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggccgccagagaaaagctaagagacaaccccatgagagatcaaagaaacgcacacgct
tttctagacaaggagctgaagaagctctggaggattattttcctagattacccacaatac
tcagagagtcagaaggcggaggaggaggagaaggttgatagtaagaacgaggagcagagg
aggcgcgccacagagggagtggtagacatcacattgctctgcctgatggagatgaaccag
gaggaactggcagataaactgtggcgtggtactgttgccgtcatgtgcaaaggtaaaatc
aagtcccatctgaaggagaagttcaggtttgtgtttgagggaatcgctaaagcaggacag
ccaacaggtctgaatgacttctacatagagctcttcatcacagatagaggcaatgaagag
gccaacaaggaacatgaggtcagactgattgaaacaacttccaggaaatcagctaaccag
gaaacaccaatcaaatgtgaagacatctttaaacccttacctactaggcaaggtcagcca
atcagaacaataatgacaactggagtggctggcattggtaaaactgtcttaacaaacaag
ttcactctggattgggctgaaggcaaagccaaccaggacatagacttcacatttgccttc
actttcagagcgctgaatttactgattgcgaaagagtttagcttggtcgaactccttcat
cacttctttattgaaaccaaagaagcagaaatctgcagatacgaccggttccaagttgtc
ttcatcttggatggtctggatgagtgccgacttcctctggacttccagaacaaccagacc
tggactgatgtcacaaagccgacctcagtggacgtgctgcttacaaacctcatcatgggc
gacctgctaccatctgctcgcatctggataaccacacgccctgcggcagcaaatcagatc
cctgcagagtgtgttgacatggtgacagaggtgagagggttcaccaacccaaagaaagag
gagtactttaggaagagattcagagaggagaccttggccagcacaatcatctcccacatc
aagaaatcccgaagcctctacatcatgtgtcacatcccagtcttctgttggatcagtgct
acagttctggaggacatcttcaaaacatcccagagaggaaaagagatgcccaagactgtg
actcagatgtacatccactttcttagggttcagtccatacaggaggataggaagtaccat
gggagagctgaaacagatcaagactggagttcagagagcagggagataattttttctctg
ggaaaactggcttttaaccagctggagaaaggcaacctgatcttctacgaggcagacctg
gcagagtgtggcattgatatcagggcagcctcagtgtactcaggagtgttcacccagatc
tttaaacaggagtgtgggctgtaccaggacagggtgttctgctttgtccatctgagcatc
caggagttcctggctgcccttcatgtatttttgtacttgatcgacactggtgtcaatctg
ctctcaaatgaacaaccaatctcctgggaagataaactcatcttcctctaccaaagtgct
gtagacaaggccttgcagagtgagaacggacacctggacttattcctccgcttcctcctg
ggcctctctctggagaacaatcagattatcttacgaggtctgctcagacagacagtcagt
agccaatggacgaatgaggaaacagtgtcttacatcaaggagaagataggtagagatcta
tctccagagcgaagcattaatttgttccactgtctgaatgagctgaatgaccgttcatta
gtggaggagttccagtacctgacatcaggaagtctctccagagaatcactctccccttct
cagtggtcagctctggtcttcatcttactgtcatcagaagaggagctggacgtttttgac
ctgaagaaatactctgcttcagaggagagccttctgaggcttctgccagtggtcaaagcc
tccaaaatatctaggctgaatggctgtcatctgtcagaaagatgctgtgaagctctggcc
tcagttctcagctccaactcctctagtctgagagagctgtacctgagtaacaatgaactg
caggattcaggagtgaagctgctctctgctggactggggagtccacactgtacactggaa
actctcaggctgaatggctgtcatctgtcagagagatgttgtgaagctctggcttcagtt
ctcagctccaactcctctagtctgagagagctggacctgagtaccaatgatctgcaggat
tcaggagtgaagctgctctctgctggactggggagtccacactgtacactggaaactctc
aggttgtctggctgcctgatcacacaggaaggctgtgcttctctagcctcagctctgagc
tccaacccctcccatctgagagtgctggacctgagctacaatcacccaggagactcagga
gtaaagctgctttctgctggactggaggatccacgctggagactggacactctcagtgtg
gagcacggtggagtgtggaggctgaaaccagctctaaagaagtacgcctctgaactcaaa
ctggacccaaacacagccaacggacgactctctctgtctatggacgacagaaaggtgacg
tggattggagaggaccagtcatatcctgatcacccagagagatttgactcacatcaccat
ctcttgtgtagagagggtctgactggccgctgttactgggaggtaaagagggaaggagag
gtttatataggagtgacatacagaggaatcacaaggaaaggatcgggtgatgacagttgg
cttggatggaacaacaactcctggagtctttcttgttatgatgatcattacactgccttg
tacaacagtagtgaaacagccatacgtctcgcccctgctggctccaacagagtgggagtg
tatctggaccggcctgctggcacactgtccttctacagagtgtccccagatgtaggaggg
tcctcagacacactgacacacatccacaccttccagtccacgttcacccaggaggacctc
ctccctgggttttacttatgggatggtgcgtcagtgtctctgtgtcaatttgatctcgct
ccgagagaccgcgcaaataggcgcacctctcgtatgcacagagagagcgagagagaggga
aggagagagagagagacagag
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