Gadus morhua (Atlantic cod): 115544312
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Entry
115544312 CDS
T10832
Name
(RefSeq) vacuolar protein 8-like isoform X1
KO
K08332
vacuolar protein 8
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115544312
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115544312
Membrane trafficking [BR:
gmh04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
115544312
Other autophagy associated proteins
Micronucleophagy
115544312
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115544312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
V-ATPase_H_N
HEAT_EZ
HEAT
Motif
Other DBs
NCBI-GeneID:
115544312
NCBI-ProteinID:
XP_030213051
Ensembl:
ENSGMOG00000033270
LinkDB
All DBs
Position
5:3924089..3930076
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AA seq
570 aa
AA seq
DB search
MCTVLCEKCALLFCKFKLRFRNICKEIAHEIAEFFSQLAECTCLSRTPPRRRQRSASDHL
LLPLLKTGDHALVLNEECFEALNDLAASVYADLQEVAALYYLYLSHCLESPLPASFMGPL
MSLLFSPHPDVQKTTCLSLVNLLVKRNVCEELAFEMGVLPPLLEIVQAGDPGARCHACAC
VTMLASSESNSDALVSEGVIPLLVLAKSFDPQVQQNAAWVLLNLTQSVRSRRVLCRAGAV
PVLVVLLQCADSRVQFYGCSALLHLAADPEHHARLLHIGERYLLKALLTLMASPVSKNAC
QACKCLEMLCRNVAVQDQLLELDCVRPLKTLLSSPVLQCVQSALILLSALATHPAFHEVL
VSEGVCDLMGPMLRRHGSSCDVILHSCASVLSLGGSCLGRQALMESECLPGLLQALVSPG
TPVEALIRLTSCLHRLMSFEALQSHLSIMMTSEEVLRLVKSSGPNGNLQLTYNCIAILST
LQMNGQVIGLLRPHYRLLMGIIVSLFKNQELKFQHLGITALCNLIQDADFRAVLSGSELE
TEVLRLSERTEETRQLLSLTGIPPASPQEP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacggtgctttgcgagaagtgtgcgttattattttgcaaatttaagcttcgtttt
agaaatatctgcaaagaaatcgcgcatgagattgcagagtttttctcacagctggctgaa
tgcacctgtctgagccgtacacctccgaggaggagacagaggagcgcctccgaccacctg
ctcctaccgctcctgaagacaggtgaccatgcccttgtgcttaatgaagaatgcttcgag
gcattgaacgatctggcagcatcggtttacgccgatcttcaagaagtagcagctctgtat
tatctgtacttgagccattgtctggagtctcccctgccagcctccttcatggggccgttg
atgtccttgctcttctcccctcatcctgatgtccagaagaccacctgtctttccttggtc
aacctgctggtaaagaggaacgtgtgcgaggagctggcgtttgagatgggcgtgctgcct
cccctgctggagatagtgcaggctggggacccgggggcccgctgtcacgcctgtgcgtgt
gtcaccatgctggcctcttcagaatcaaacagtgatgctcttgtgtcggagggagtgata
cccttgctggttctagccaagtcctttgatcctcaagtccagcagaatgcagcgtgggtg
ctgttgaacctcacacagtcagtgcgctcccggagggtgctgtgccgggcgggggcggtg
cccgtgctggtggtgctgctgcagtgcgccgactccagggtgcagttctacggctgctcc
gccctgctccacctggcggcggaccccgagcaccacgcccgcctgctgcacatcggggag
cgctacctgctcaaggccctgctcacgctcatggcctcgcctgtcagcaagaatgcatgc
caagcgtgtaaatgccttgaaatgctctgcagaaatgtggcggtgcaggaccagctgctg
gagctggactgcgttcggcccctgaagacgctgctgtcctcccccgtgctgcagtgtgtg
cagtcggccctcatactgctgtcagccctcgccacacatccggcgttccacgaggttctg
gtgagcgagggcgtgtgtgacctgatgggtccgatgctgcggcgccacggatccagctgt
gatgtcatcctgcacagctgcgccagcgtcctctctctgggaggctcctgcttgggccga
caggcgctgatggaaagcgagtgtttgcccggccttctccaggccctcgtttccccgggg
acccctgtggaagctctgattcgcctcacttcctgcttgcatcgcctgatgtcctttgag
gcacttcagtcgcacttgtcaataatgatgacatcggaagaagttttaagactggtaaaa
tcatccggacccaacggaaatcttcagctgacatacaactgtatcgccatcctcagcaca
ttacaaatgaatgggcaagtaatcggattactgagaccgcactaccgcctcttgatggga
atcatcgtttccttgttcaagaaccaggagctcaaattccagcaccttggcattacagcg
ctatgcaacctcattcaagatgcagacttcagggcggtgctgtcgggcagcgagctggag
acggaggtgcttcggctgagcgagcggacggaggagaccagacagctgctgagcctcacc
gggatccctcccgcctcccctcaggagccctga
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