Gadus morhua (Atlantic cod): 115544318
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Entry
115544318 CDS
T10832
Symbol
nfatc2
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04148
Efferocytosis
gmh04218
Cellular senescence
gmh04310
Wnt signaling pathway
gmh04370
VEGF signaling pathway
gmh04625
C-type lectin receptor signaling pathway
Brite
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
115544318 (nfatc2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
115544318
NCBI-ProteinID:
XP_030213066
Ensembl:
ENSGMOG00000034240
LinkDB
All DBs
Position
1:15636752..15656524
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AA seq
954 aa
AA seq
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MTYFYDETEAAEDLSKMNYPDEDLQFEYLFEYEPPSDDFAGGKQDDPNLTAQKLLSPESE
QAFPLEEAPYGIKPCSPSYGGHAVQVVAGYDAQELSRSYLDHHQHHHQRPSGLALSPRIE
ITPSREHYNHVRDSLQNHPLNTSPRPTLTVPGHESQSYREPQCLSPASSNSSTSWHSESY
SPFASPCVSPGSGQTAADLCPRLQSIHTGGSPRTSPGTSPRTSLAEDGGPGGPRSPSPRP
DSRSVSPQGKRTYDMCRNQGLIPGHRSRSPSPSHAAHEEYNIGAHYGPNAHLHQHHLHHH
HGSPIANVVNCFGPGQPGLVPSKIVRTANHNQVYTLYPENHVEGNYLVSCDQDMKSRPGS
EPFFVMPPIWPKPLVSSLCSIPLASLPPLEWPMPNHTEHYELHIDVQPKPHHRAHYETEG
SRGAVKAPTGGHPVVQLHGYKGKEPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTS
LEKVVNGTKVLEIPLEPKNNMKAIIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRV
HIPQPGGQHISLQAASHPIECSQRSAHELPLVEKQDMDGCSVLGGQQMILTGQNFSSDSR
VIFMEKTQDGQQIWEMEATVDKDKSQPNLLFVEVPSYRELSVCHSVKVHFYVINGKRKRS
QPQHFTFTPLSVPSIKTEPQDEYEAAHMGFAVPQMLGLSPHSYYHNARAILQPDSGLVSG
LASCLEGGRAPQDPRYQQQQQLQSHAIINAAGLSSPGLYQQMPEPHRSVLVHAGSPSQPL
GGPHLAAGQHPSIIQFSPNGPPAHHHLLLRGAGDPPPTAAPPAAPQADNSSSQQPITYGE
DGYSPQSTPNTSPHTQGGPAAGQPQHYATVIQPQPQYTQKALPQKVRSPPTPGAPGPEQA
GQEGPQEGAPALGNGHQRRVAVKEENLDQAYLDDGEFNEIIRKDLTAVQARGQT
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacatatttttacgacgaaaccgaggctgcggaggacctgagcaaaatgaactaccct
gacgaggatttgcagttcgaatatttgtttgaatacgaacctcctagtgacgattttgca
ggaggaaaacaagatgacccgaacctcacggcccaaaagctcctcagcccagagtctgag
caggccttccccctggaggaagccccctacggcatcaagccctgcagcccgtcctacggg
ggccacgccgtgcaggtcgtcgcaggctacgacgcccaggagctctcccggagctacctg
gaccaccaccagcaccaccaccagcgccccagcggcctggctctgagcccccgcatcgag
atcacgccctcccgcgagcactacaaccatgtcagggactccctgcagaaccaccccctg
aacaccagcccccggcccacgctgaccgtgcccggccacgagagccagtcctaccgggag
ccccagtgcctgagccccgccagcagcaactcctccaccagctggcactcggagagctac
tcccccttcgcgtccccctgcgtgtcgccgggcagcgggcagaccgccgccgacctctgc
ccccgcctgcagagcatccacaccgggggctccccgcgcacctccccgggcacctccccc
cgcaccagcctggccgaggacgggggccccggggggccccgctcgccgtcccccaggccc
gactcacgctcggtgtcgccgcaagggaagcgcacctacgacatgtgccgcaaccagggt
ctgatcccgggacaccgctcccgcagcccctccccgtcgcacgccgctcacgaagagtac
aacatcggggcccactacggccccaacgcccacctccaccagcaccacctccaccaccac
cacggcagccccatcgccaacgtggtgaactgcttcggccccggacagcccggcctggtg
cccagtaagatcgtgaggacggccaaccacaaccaggtgtacaccctgtaccctgagaac
cacgtggaggggaactacctggtgtcctgcgaccaggacatgaagtccaggcccggctcg
gagcccttcttcgtcatgccgcccatctggcccaaacctctggtgtccagcctatgcagc
atcccgctggcgtccctccctcccctggagtggcccatgcccaaccacacggagcactac
gagctgcacatcgacgtgcagcccaagccccatcaccgggcccactacgagacggagggc
agccggggggccgtcaaagcccccaccggcgggcatcccgtcgtccagctgcacggctac
aaaggcaaggagcccctcggcctgcagatcttcatcggcacagcagacgagcgcatcctg
aagccgcatgccttctaccaggtccaccgcatcacgggcaagacggtcaccaccaccagc
ctagagaaggtagtcaacggcaccaaagtcctggagatccccctggagccaaagaacaac
atgaaagccataatcgactgtgccggaattctgaagctcaggaacgccgacatcgaactg
aggaaaggggagacggacatcgggcggaagaacacccgcgtgcgcctggtgttccgagtc
cacatccctcaacctggagggcagcacatctcactgcaggccgcctcacatcccatagag
tgctcccagcgctcggcccatgagctccctctagtggagaagcaggatatggacggctgc
tccgtcctggggggccagcagatgatcctgacggggcagaacttcagctccgactccagg
gtgatcttcatggagaaaacccaagacggccagcagatatgggagatggaggcgactgta
gacaaagacaagagtcagccaaacctgctgtttgtggaggtgccttcctaccgggaactg
tccgtctgccactcggtcaaggtccacttctacgtcatcaacggcaagaggaagcggagc
cagccgcagcatttcaccttcaccccgttgtcagtgccctccatcaagacggagccccag
gacgagtacgaggcggctcacatgggcttcgccgtgccccagatgctgggcctgtccccc
cactcctactaccacaacgcccgggccatcctgcagccggacagcggcctggtctccggc
ctggcctcctgcctggagggggggcgggccccccaggacccccgctaccagcagcagcag
cagctgcagagtcacgccatcatcaacgccgccggcctgagcagccccggcctgtaccag
cagatgcccgagccgcaccgctctgtgctggtccacgccggctctccgtcccagcccctg
gggggtccccacctggcggcgggccagcacccgtccatcatccagttctcccccaacggc
ccccccgcacaccaccaccttctgctccgaggggcgggggaccccccgcccaccgccgcc
ccccccgccgcccctcaggccgacaacagcagcagccagcagcccatcacctacggcgag
gacggatactccccccagtccacgcccaacacgtccccccacacccagggggggcccgcg
gccggccagccgcagcactacgccacggtgatccagccccagccccagtacacgcagaag
gccctcccgcagaaggtccgatccccccctacccccggggcccctggccccgagcaggcg
ggccaggagggaccccaggagggggccccggccctggggaacggccaccagaggagggtg
gcggtcaaggaggagaacctggaccaggcctacctcgatgacggtgagttcaatgaaatc
ataaggaaggatctgactgctgtccaggccagagggcagacatag
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