Gadus morhua (Atlantic cod): 115544418
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Entry
115544418 CDS
T10832
Symbol
arid4a
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115544418 (arid4a)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115544418 (arid4a)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
ARID
115544418 (arid4a)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115544418 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
115544418
NCBI-ProteinID:
XP_030213233
LinkDB
All DBs
Position
5:22078946..22101406
Genome browser
AA seq
1711 aa
AA seq
DB search
MRIKASSWTTSNSLKMKAVDEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVVLKGE
STSQVVQDDQVKGALRIGSTVEVRTNEGPSTQAVISKLTDASLYTVVFDDGDEKTLRRTS
LCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKSNRGGRRSSQPVADEEHHSSSSEEDE
EDRRRLKDDILGKVCCVQDTSDRSGWYLALVVSPSCSDEMMVKKDQCLIRSFSDSKFSTV
SRKDVHVVAADAITRPEFSCRKGHKAAVSFLRSQEVPELWKMDMSQILDSSSSDEDEEVG
GREKDSEEEEEGKKKRNVKEEPEEEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDL
NLFKLFRLVFQLGGCHKIESGTVWKQVYVDLGIPVLNSAASYNVKTAYRKYLYGFEEYCR
SASITFRTIHHNNPRPPSALASPAPEEAEPKDPGPIRVQAAVEKEEPESDGERGGGGGGG
GGGGLRRSLPSPRGRRRWPGKSDRRDSISQMERDRLKEERGDGLSRMERDRQERGDGLSR
MERDRQERGDGLSRMERDRQEERGDGLSRMERDRLKEERSGETSGEEQREGERVPPRRRS
HRRHDDSDKESGEDEEEEEEDEDEDEDVERRRERGEGEEGDEDEDSLMGTKVRVKYGRGK
SQKIYEANIKKMDSDDGDQIYLVHYYGWNVRYDEWVKADRIIWPVDKGATKRRTRKKLKN
KEDGDRGGEEEKGLMKPGSGRRGRPQTRTPPSTSSVRSFSKTPSSDGQGRRNESSPTTAN
GDETPRRRNRMSGVYDSDRPSYEDSGNSSEDSGSEDAPPHLREEVDRNEEEEGPNAEAEL
KEEEPEEVLDLKEDTALSGEGLKEEAELSGSDVLPPAGNTSAATATVEPATAAATPCPSV
PQEQEDRGQSERKEPQRGEEPESGGAMSPSHNKMSPSHNKMSPSHNKMSPSHNKMSPSRK
MSPSNLKMSPSHNKMSPSHKMSPSHLKMSPCLPDKQLDLSLEASPKPKGRRSSAKEIGAE
TPPRAPPTSSLTPPSSSLTPPTSSMTPPTSSMTPPYKLNDPAYKSMTPPTSSMTPPTSSM
TSPTSLKTPPISSMTPPTSSMTPPTISMTSPTRPITPPTCTMTTPNSSTTPPSHTMTPPP
CPLTTPSHTRSPPSSRMTPPMSSMTPPTTAVSPPTSAVTSPKNTRILPAAAVTPPTNVMA
PPSNHTTPPTRAVAPPTHAVATPTGAVTHASQLALSPLRGGLLKRQDEPMVVLHCLPAQH
LPPEPPPSLDSDTDSAPEDDSLEPDDGLALWGGNMVNMVNMAKRKALEQPGADKKVRLEQ
TPQDGPRHMTPRSPHLQAQTPPRAPQVLAQTPPRPAQTPPRPAHILPQTPSRPAHVLPQT
PPRPAHILAQVAVVPPSEARARGAEWREEQAPPPPAARGAVLHPAPRPGPTEQLLHPQAQ
QILSIQHRQGPPAQLHQQAQPQQSAAPEEMGPQMDPEALVCHEVDLDDLDEKEKAPPSGK
LLYQSPVQAPPPPPAPPTADQPRLQEEGLEDQPNLSPYEGKDRGQKRLLDGNQNPSAKKA
KRSQKSTDAGGKTERNGTAAQSSDSEDPSAPDPPLLPDQTKLCTPVKQALSRAGKPSRSP
QMSSPHRTYKWSFQLDELDRMSSSERVSFLQDKLQEIRKYYLSLKSEVASIDRRRKRLKK
KEREVSNTTVSTSSGSEGMTPPQSSVAVECR
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgagaattaaagcttcgagctggacgacctcaaatagccttaagatgaaggcggtggat
gagccagcctacctgactgtagggaccgacgtcagcgccaagtacagaggggccttctgt
gaagctaagatcaagactgtgaagcgcctggtcaaagtgaaggtggtcctgaagggggag
agtacatcccaggtggtccaggatgaccaggttaaaggagcgctgaggattggttccacg
gtggaggtgaggaccaatgagggaccctccacgcaggcggtcatcagcaagctgacagac
gccagcctgtacaccgtggtgtttgatgatggtgatgagaagactctccgtcgtacgtcc
ctgtgtctgaagggagagagacactttgcagagagtgagactctggaccagcttccgttg
accaacccagaacattttggaactccagtgatcggcaagaagtcgaaccgcggtggccga
cgctcctcccagccagtggctgacgaggagcatcactcttcgtccagcgaggaggacgag
gaggaccggcggaggctgaaggacgacatcctggggaaggtctgctgtgtccaggacacc
agcgaccgctcaggctggtacctagcgctggtggtgtctcccagctgctcagacgagatg
atggtgaagaaagaccaatgtctcatcagatccttctcggactccaagttttccacagtt
tccaggaaagacgtccatgttgtcgcggccgacgccatcacaaggccggagttctcctgc
aggaaagggcacaaggcagccgtgtccttcctgaggagccaggaggtccccgagctgtgg
aagatggacatgagccagatcctcgactcctcctccagcgacgaggacgaggaggtcggc
gggcgggagaaggacagcgaggaggaggaagaggggaagaagaagaggaacgtcaaagag
gagcctgaagaagaggcagacccagaagagagagaccacttcctgcagcagctctacaag
ttcatggaggaccgaggcactcccatcaacaagcccccagtcctgggctacaaggacctg
aacctgttcaagctcttccggctggtgttccagctggggggatgccacaaaatcgagagc
ggcaccgtgtggaagcaggtgtacgtggacctcgggatccccgtcctgaactctgctgcc
tcctacaacgtgaagacggcctacaggaagtacctctacggcttcgaggagtactgccgc
tcggcctccatcaccttcaggaccatccaccacaacaacccccgccccccctccgcgctg
gccagccccgcgccggaggaggcggagcccaaggaccccgggccaatcagggtccaggcc
gccgtggagaaggaggagccagagtcggacggcgaaagaggagggggaggcggaggagga
ggaggaggaggtctaaggcggagcctcccgtcacccagggggaggcggcggtggccaggg
aagtctgaccgccgggacagcatatcccagatggagagggacagactgaaggaggagcga
ggggacggcctgtcccggatggagagggacagacaggagcgaggggacggcctgtcccgg
atggagcgggacagacaggagcgaggggacggcctgtcccggatggagagggacagacag
gaggagcgaggggacggcctgtcccggatggagagggaccgactgaaggaggagcgaagt
ggagagacgagcggcgaggagcagagggaaggagagcgggtaccacccaggagacgcagc
catcgtcgccacgacgactcggacaaggagtccggggaggacgaggaggaggaggaggag
gacgaggatgaggacgaagacgtagagcgacggagagaaaggggtgagggggaggagggg
gatgaggatgaagactcgttgatgggtacgaaggtcagggtgaagtacggcagagggaag
agccagaagatctacgaggccaacatcaagaagatggacagcgatgacggagaccagatc
tacctggtgcactactatggctggaacgtcaggtatgatgagtgggtgaaggccgaccgc
atcatctggcccgtggacaaaggagccaccaagaggagaactcggaagaaactcaagaac
aaggaggacggcgaccgggggggggaggaggagaaggggctgatgaagccggggagcggg
aggcgcggccggccccagacgcggacccctccctccaccagctccgtccgaagcttctcc
aagacgcccagcagcgacggccagggccgccggaacgagagctctcccacgacggccaac
ggagacgaaaccccacgaaggcgcaacagaatgtctggcgtgtacgactcggaccggccc
tcctacgaggattctgggaactcgtcggaagacagcgggtcagaggatgctccgccccat
ctccgggaggaggtggaccgtaacgaggaggaggaggggcctaatgctgaggccgagctt
aaagaggaggagcctgaggaggtgcttgaccttaaggaagacactgctctctcgggggag
gggctcaaggaggaggcggagctaagcgggtcggacgttctgccccccgctggcaacacg
tccgctgctacggcaacggtggaaccggctaccgctgctgcaaccccatgtcccagcgtc
cctcaggagcaagaggacaggggccaatcagaaaggaaggagcctcagaggggggaggag
cccgaatctgggggtgccatgtctcctagccacaacaagatgtctcctagccacaacaag
atgtctcctagccacaacaagatgtctcctagccacaacaagatgtctcctagccgaaag
atgtcacctagcaacctcaagatgtctccaagccacaacaagatgtctcctagccacaag
atgtcccctagccacctcaagatgtctccttgtctcccggataagcagctggacttgtct
cttgaagcctctcccaagcccaaaggtcgcaggtcaagtgcaaaagagattggtgctgaa
actccaccaagagccccgcccacaagctcactgaccccgccctcaagctcactgaccccg
cccacaagctcaatgacccctcccacaagctcaatgaccccgccctacaagctcaatgac
cccgcctacaagtcaatgaccccacctacaagctcaatgaccccgcctacaagctcaatg
acctcgcccaccagcctaaaaactccgcccatcagttcaatgaccccgcccaccagctca
atgaccccgcccaccatctcaatgacctcgcccaccaggccaatcaccccgcctacctgc
actatgaccacgcccaatagttcaacgacccctccctcccacacaatgactcctccccct
tgcccactgaccacgcccagccacacaaggtctccgccctccagtagaatgactccaccc
atgagctccatgactcctcccactacagcagtgagccctcctaccagtgcggtaacctca
cccaagaacacgaggattctgcccgctgccgccgtgacaccacccaccaacgtcatggcc
ccgccctcgaaccatacgactcctcccactcgcgctgtggctcctcccacccacgctgtg
gccactcccaccggtgccgtgactcacgccagccagctggcgctgtctcccctgcggggc
ggcctgctgaagaggcaggacgagcccatggtggtcctgcactgcctgccggcgcagcac
ctccccccggagccccccccctccctggactcggacacggactcggccccggaggacgac
tccctggagcccgacgacgggctggccctgtgggggggcaacatggtcaacatggtcaac
atggccaagcgcaaagccctggagcagcccggcgccgacaagaaggtccgcctggagcag
accccccaggacggcccgcgccacatgaccccccgatcgccccacctccaggcccagacc
ccccccagggcgcctcaggtcctcgctcagacgcccccgagaccggctcagacgccccct
agacccgcccacatcctgccgcagacgccctctagacccgcccacgtcctgccgcagacg
ccccccagacccgcccacatcctggctcaggtggcggttgtcccgccctcggaagcccgg
gccaggggggcggagtggagggaggagcaagccccgcccccgccggccgctagaggggcc
gtcctccacccggccccgcgaccgggccccacggagcagctcctccacccccaggcccag
cagattctctccatacagcaccggcagggcccccccgcgcagctccatcagcaggcccag
ccgcagcagagcgcggcgccggaggagatgggcccccagatggacccggaggccctggtg
tgccacgaggtggacctggacgacctggacgagaaggagaaggcgccgccctcagggaag
ctgctctaccagagccccgtccaggctccgccccctccccctgccccgcccacagcggac
cagccccgcctccaggaggagggcctggaagaccagcccaacctgtcgccctacgagggc
aaggaccggggtcagaagcggctactggacgggaaccagaacccgtcggccaagaaggcc
aaacgcagccagaagagtaccgacgccgggggcaagacggagcgcaacggcaccgcagcc
cagagcagtgacagcgaggacccctcggccccggacccgcccctgctgccggaccagacc
aagctgtgtacccccgtgaagcaggctctctccagggcggggaagcccagccgctccccc
cagatgtcctccccgcaccggacctacaagtggtccttccagctcgacgagctggacagg
atgtccagcagtgagcgcgtctccttcctgcaggacaagctgcaggagatcaggaagtac
tacctgagcctcaagtcggaggtggcctccatcgaccggcgccgcaagaggctcaagaag
aaggagcgggaagtgtctaacaccacagtgtcgacctcttcggggtcagagggcatgacc
cctccccagagctctgtggcagtggagtgcaggtga
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integrated database retrieval system
