Gadus morhua (Atlantic cod): 115544517
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Entry
115544517 CDS
T10832
Name
(RefSeq) homeobox protein Nkx-2.2a isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115544517
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
115544517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Pep1_7
Motif
Other DBs
NCBI-GeneID:
115544517
NCBI-ProteinID:
XP_030213354
Ensembl:
ENSGMOG00000034299
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Position
5:8642146..8658883
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AA seq
276 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSITGAEEDTEGSETASTTKNSGVLVQSPLDSVQN
LPLKTPFYDSSDNPYTRWLATTDSIQYSLFLLCAVHGLSASSQDSAKSPEPSADESPDND
KETSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIW
FQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGIPFSA
YSAQSLQHMQYNAQYSAATTPQFPAHHLVQTQQWTW
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaccaacacaaagacgggcttttctgtaaaggacattttggatctccctgac
acgaatgatgaagaaggatctatcaccggagcggaggaagatacggagggatcagagaca
gcttccacgacgaaaaacagtggagttttggtgcagagtccgctcgatagcgtccagaat
ctacctttaaagacccctttttacgacagtagtgacaatccttacacgcgatggcttgcc
actacggacagtattcaatattcattgtttctcctttgcgcagtgcacggtctgtcggcc
agcagccaggactccgccaagtccccggaaccgtctgcggacgagtcgccggacaacgac
aaggagacttcaagcaacgggagcgactccgggaagaagcgcaagagaagagttttgttt
tccaaggcgcagacatacgaacttgagcgccgctttagacaacagaggtacctctccgct
ccggagagggagcacctcgcgagcttgattcgcctgacaccgacccaagtgaaaatttgg
ttccagaatcatcggtacaaaatgaagagagcccgcgccgaaaaaggtatggaagtgacc
catctcccctcacctaggcgggtggccgtgcctgtcttagtcagggatggaaagccttgt
catactcttaaagctcaggacttggcggccacttttcaggctgggatccccttctcggcg
tatagtgcgcagtcacttcaacacatgcaatataatgcccagtacagcgccgccaccacg
ccacaattccctgcacatcacttggtgcaaacgcaacagtggacttggtga
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