KEGG   Gadus morhua (Atlantic cod): 115544785
Entry
115544785         CDS       T10832                                 
Symbol
raf1
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04010  MAPK signaling pathway
gmh04012  ErbB signaling pathway
gmh04068  FoxO signaling pathway
gmh04140  Autophagy - animal
gmh04150  mTOR signaling pathway
gmh04210  Apoptosis
gmh04218  Cellular senescence
gmh04270  Vascular smooth muscle contraction
gmh04370  VEGF signaling pathway
gmh04371  Apelin signaling pathway
gmh04510  Focal adhesion
gmh04540  Gap junction
gmh04625  C-type lectin receptor signaling pathway
gmh04810  Regulation of actin cytoskeleton
gmh04910  Insulin signaling pathway
gmh04912  GnRH signaling pathway
gmh04914  Progesterone-mediated oocyte maturation
gmh04916  Melanogenesis
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115544785 (raf1)
   04012 ErbB signaling pathway
    115544785 (raf1)
   04370 VEGF signaling pathway
    115544785 (raf1)
   04371 Apelin signaling pathway
    115544785 (raf1)
   04068 FoxO signaling pathway
    115544785 (raf1)
   04150 mTOR signaling pathway
    115544785 (raf1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115544785 (raf1)
  09143 Cell growth and death
   04210 Apoptosis
    115544785 (raf1)
   04218 Cellular senescence
    115544785 (raf1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115544785 (raf1)
   04540 Gap junction
    115544785 (raf1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115544785 (raf1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    115544785 (raf1)
  09152 Endocrine system
   04910 Insulin signaling pathway
    115544785 (raf1)
   04912 GnRH signaling pathway
    115544785 (raf1)
   04914 Progesterone-mediated oocyte maturation
    115544785 (raf1)
   04916 Melanogenesis
    115544785 (raf1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    115544785 (raf1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115544785 (raf1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gmh01001]
    115544785 (raf1)
Enzymes [BR:gmh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     115544785 (raf1)
Protein kinases [BR:gmh01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   115544785 (raf1)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like ABC1 zf-RING-like Pkinase_fungal C1_2
Other DBs
NCBI-GeneID: 115544785
NCBI-ProteinID: XP_030213460
Ensembl: ENSGMOG00000016976
LinkDB
Position
1:17230547..17242446
AA seq 658 aa
MEHLQCAWKTLSNGFGMKDSVFEGPCHSPTMVQGFPYQRRSSDDGKMPDSKASSTIRVYL
PNQQRTVVNVRPGLTLHSCLIKALKVRGLQPECCAVFRLHPGQRNKKFRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLFPTPGESGGPSLPPLTSRRMRESLSRFPNSAMHRYSTPHAFNYTTPY
PPTVGSLSQRQRSTSTPNVHMVSTTLPVDSSMIEDAMRDHDSAESSPSQSPTGWAPAQHR
TLTPAQRERATSFNTQEKNIIRPRDKRDSSYYWEIEASEVFLQSRIGSGSFGTVYKGKWH
GDVAVKILKVTDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSL
YKHLHVQETNYKMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGL
ATVKARWSGSHQVEQPSGSILWMAPEVIRMQDNNPYSFQSDVYSYGVVLYELMTGELPYA
LIDRDQIIFMVGRGYLSPDLSKLYKSCPKAMKRLVADTIKKLKEERPLFPQILSSIELLQ
HALPKINRSTSEPSLHRASHAEDIDVCTLTSTRLPVFQTRLSPLHMPPSSFSYMSNEL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggagcaccttcagtgcgcgtggaagaccctgagcaacggctttggaatgaaggactct
gtgttcgagggcccctgccattcccccaccatggtccaaggcttcccctaccagcgccgc
tcctcagacgacggcaagatgcctgactcaaaggccagcagcacaatccgcgtgtacctc
cccaaccagcagcgcaccgtggtaaacgtgcgaccaggtctaaccctgcacagctgcctc
atcaaggctctgaaggtgcgcgggttgcagccggagtgctgtgccgtcttcagactgcac
ccgggccagaggaataaaaaattccggatggattggaataccgactccacatcgctgatc
ggggaagagctgctggtggaagttttggatcacgttcctctcaccacgcacaattttgtt
agaaaaacatttctcaagttggccttctgtgacatttgccagaagtttcttttgaatggt
ttccgttgccaaacgtgtggctacaaattccatgagcattgtagcaccaaagttcctaca
atgtgtgtggactggagcaatatcagacaactcctgttgttcccaacaccaggagaaagt
ggtggtccgtccttacccccactgacgtctcggcgaatgagagagtccttgtctcgtttt
cccaatagcgctatgcatcgctactctacgccccatgccttcaactacaccacgccgtac
ccgcccacagtgggctctctgtcccagaggcagcgctccacctccacccccaacgtccac
atggtcagcaccacccttcccgtcgacagcagcatgattgaggatgccatgcgggatcat
gattctgccgagagctctcccagtcagagccccactggttgggctccggcccagcataga
accctgaccccggcccagcgggagcgggccacgtccttcaacactcaggagaagaacatc
atcaggccgagggacaagcgggactcgagctactactgggagatcgaggcctccgaggtc
ttcctgcagtcccgcattggctccggctcctttgggacggtatacaaagggaaatggcac
ggtgacgtagcagtgaagatcctgaaggtgacggatccaacaccggagcagtttcaggcc
ttcagaaatgaggtggccgtccttaggaagacgcgtcatgtcaacatcctgttgttcatg
ggctacatgacgaaggacaacctggccatcgtcacgcagtggtgcgagggcagcagcctg
tacaagcacctgcacgtccaggagaccaactacaagatgttccagctcatagacatcgcc
cggcagactgcacagggcatggactatctgcatgcaaagaacatcattcaccgcgacatg
aagtccaacaacatcttcctgcatgaaggtctgacggtgaagatcggggacttcggcctg
gccacggtgaaggcccggtggagcgggtcccaccaggtggagcagccatcggggtccata
ctgtggatggcccccgaggtgatccggatgcaggacaacaacccgtacagcttccagtca
gacgtgtactcctacggtgtggttctgtacgagctcatgacgggagaactgccgtacgct
ctgatagaccgagaccagatcatcttcatggtcggccgaggctacctgtcccctgacctt
agtaagctctacaagagctgtcccaaagccatgaagagactggtggcagacaccatcaag
aagcttaaggaggaacgccctctgttccctcagatcttgtcctcgatcgaactgctgcag
catgctctgcctaagatcaaccgcagtacctcagagccctctctgcaccgggcgtcccac
gccgaggacatcgacgtctgcaccctcacctccacccgcctgccggtcttccagacgcgc
ctgtcaccgctgcatatgcccccttcgtctttctcatacatgtccaacgagttgtag

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