Gadus morhua (Atlantic cod): 115544989
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Entry
115544989 CDS
T10832
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115544989 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115544989 (ttc37)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
115544989 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_11
TPR_16
TPR_17
TPR_14
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
ANAPC8
TPR_MalT
Fis1_TPR_C
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
115544989
NCBI-ProteinID:
XP_030213539
Ensembl:
ENSGMOG00000016890
LinkDB
All DBs
Position
6:complement(13229031..13247911)
Genome browser
AA seq
1571 aa
AA seq
DB search
MSTKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKENYNAWVFIGLAASELEQPDQAQ
TAYKKALELEPEQLLAWQGLANLYEKTDQWDFKAELPDVYQKLVELYASTDKTKCYEVIK
KLTESYRSDKEHLKLAKLWLQFLELKEKDAIEKADLLQLWQQMIKELSGFVETHQTDNET
QQHLVNAFEKAMVLTCPAPGEEHRKLSADYIRCLSKLPQAEAKMKEACKSMLSLYPSKSY
PLEVLCLHHLKTDVQTEEAGSCFSQLLEMSPNNGLAHVGMGTKLLQEGKYLEAIRSLAQG
LKQTGSTTGWCSLAQAQLKLHRYSDSALSCSQGLTLCVSGDEDVKIKLLRMRLETLVRSG
DAQAADQALETMKQIPGAENDTVLKAFKGRAYLNKGQAEQALQVSSELLDSMPDLVQGLV
LRGLGQAAQGQLQLSEQSFLQAAAQGPDVGESYFLLGKLYWDMGEESRRDRSKAHTHLLK
AAKLDPNLGCVYRHLGHYYRQVVQDASRARGCYKKAFELDASDEESGAALVDLSMEQGDM
DTALAVLQAVIDDSTPGSAKWAWMRRGLYHLKVGQQPQAIADLQSALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHALQPSSIYSVYQTASIKQTLGKFQEAAAEYRQITAREDY
VPALKGLGECLLSLAKGLLEDYRDGSAIDLIQQAIKSHFRAVELRPDLSCLWKLLGDACT
TVSAVSPNRARVLMPGPLAGLEPSSQNHLLNQAQTLKVGERCYGRALKLMPEAPSLWYDL
GLNYHRQASLPCLADGDNSSQPLLLEKAQQCVKKAIMMDSGNYSYWNALGVIAMSKGLEN
FALAQHSFIKSVGVEPNNVTAWTNLGTLYLKKENLELSHEAFKVAQSLEPLYVNCWIGQA
LIAEAVGSYDTMDLFRHTTELSTHTEGVKGYAFWVCSTLLDKSNRDSELYRYNIVQMNAV
SAAQTALSKYTERIQTDPDALIMLGFLNEHLQLKTQALQAYQRAVELLQSGPPTDELAFA
LGSLGRALCSSGQWEEAVRVYSSTPLQELQDLAGLALAHCRAGHIPESINAYERALAIAS
SEKEKAYILTALALLQHRLGGLDSAKTLLFKCSMLKEPIPESLLCLCALGLDHGDATLAA
AALTELLKQGTATGGAVEQRCLLTCALLALQGNYSGVQREASRAVHSNPGNPSLWALLSR
LVPQYCPKKANGGAVAGHVACLASMTQGKRALLYSGVNQLAGGRHSGEDRHRNALKTMQR
AVLLCPDDPAAWASLMAACHTENAARFLSQNATRTEGLEPTLMAVVSEKVRCVEEIERPL
AQALEAWVLQQALAGLTLGGRLDEAEALCAQVLSVSPEHPAIVLSLRRVQCQRLLLAGAG
TVLPDAVLEQLSSSVMVNPTNLGAWHWLAELYRSQGLLIQAVMAYRQSLQLASQLCLPSA
QIASLLGLALLALGPCMAGVHGNEWNELVLEATSEALKLASSSMALLLQALLQFATKMGA
RETRRQLERLAYPPCPGEQAGSVVQVARWYLLKHLHAKNDQELMDTLLEHAKGSGDQRLL
TLYSHLTSSSS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaaagaagtgaaagctgcactgaaaagtgccagagaggctattaaaaacaaa
gaattcaaagaggctttaaagcattgcaaggctgttttgaaacttgaaaaggagaactat
aatgcctgggtgtttatcggcctggcagccagtgagctggagcaaccggaccaggcgcag
acggcgtataaaaaggccctggagctcgaacctgagcagctacttgcatggcagggctta
gctaatttgtatgagaagaccgatcagtgggatttcaaagctgagctgcctgatgtctac
cagaagctggtggagctgtatgcgagcacggacaaaactaaatgttatgaggtgatcaag
aaattaactgaaagctatcggtcggacaaggaacatttaaagttggcaaagctgtggttg
cagttcctcgagctgaaggagaaagacgctatagagaaggctgacctgctgcagctgtgg
cagcagatgatcaaggagctgtcgggctttgttgagacacatcagacagacaacgaaacg
caacagcatttggtcaacgcttttgagaaggccatggtgctcacctgtccggcccccgga
gaggaacacaggaagctctcggctgactacatcaggtgtctctctaagcttccacaagcg
gaggccaagatgaaagaggcctgcaagtccatgctgtccctctaccccagtaagagttac
cccttggaggtcctgtgcttgcaccacctcaaaacagatgtccagacagaggaagctggc
agctgtttctctcagctcctggaaatgtccccaaacaatggtctggcccacgttggtatg
ggcaccaaattgctgcaggaaggcaaatatctagaggccatcaggagcctggcacaaggc
ttgaagcaaacaggctccactaccggatggtgtagtctggcccaggcccagctcaagctg
caccgatacagtgacagcgcgttgtcctgctcccaaggtctgaccctgtgtgtatctgga
gatgaggatgtgaagataaagctgctgaggatgaggctggagaccttagtccggagtggg
gacgcccaggctgcagaccaggccctggagaccatgaagcagatccctggtgctgaaaat
gacacagtcctgaaagcttttaaggggagagcgtatctgaacaaagggcaggctgaacaa
gctctacaggtgtcctctgagctgctggactccatgccagacctagtccaggggctggta
ctgagaggcctggggcaggccgcccagggacagctccaactgtcagagcagagtttccta
caggctgcagcccagggccccgacgtcggggagagctatttcctgttgggaaagctctac
tgggacatgggagaggagagccgtcgggaccgaagcaaggcccacacacatctgcttaag
gccgcaaagctggacccgaacctgggctgcgtgtaccgccacctgggccactactaccgg
caggtggtccaggacgccagccgcgcccgcggctgctacaagaaggcctttgagctggac
gccagcgatgaggagtctggggccgccttggtggacctcagcatggagcagggagacatg
gacaccgctctggccgtgcttcaggcggtgatcgacgactccacgcctgggtcggccaag
tgggcttggatgagacgaggcctgtatcacctgaaggtcggacagcagccccaggctata
gcagaccttcagtcggctctgagggccgacccggaggactgggtgtgctgggagtgtctg
ggcgaggcctacctgaaccgccggagcttcacggccgccctgaaggccttcggcaaggcc
cacgcactgcagccctcctccatctacagcgtctaccagacggcctccatcaagcagacc
ctgggcaagtttcaggaggccgccgcagagtaccggcagatcactgcccgcgaggactac
gtccccgccctgaaaggtctgggagagtgtctgctgtccctggccaaaggtttattggaa
gactaccgagacggaagcgccatagacctcattcaacaggccatcaaaagccacttcagg
gcggtggagctccgtccagacctgtcctgcttgtggaagctgctgggagacgcctgcacc
acagtcagtgccgtgtctcccaacagagcccgtgttctgatgccaggcccgctggctggt
ttggagccctccagccagaaccacctgctcaaccaggcccagaccctcaaagtgggagag
cggtgctacggccgcgctctgaagctgatgcccgaggcccccagcctgtggtacgacctg
ggactcaattatcatcgtcaagccagtctcccctgccttgcagatggggacaacagcagc
cagcccctgctcctagagaaggcccagcagtgtgtaaaaaaggcaatcatgatggacagt
gggaactatagctactggaatgcactgggagtgatcgcgatgagcaaaggtcttgagaac
tttgccctggctcaacacagcttcataaaatccgttggagttgaacctaataacgtaaca
gcctggaccaatcttggcacactgtatttgaagaaggaaaatttagagctgtcacatgag
gccttcaaagtagcgcagtcgttggagccgctgtatgtgaactgctggattggacaggct
ctgatagcagaggcagtggggagctacgatacgatggacctcttcaggcacaccacggaa
ctcagcactcacacggagggggtgaagggctacgccttctgggtgtgctccaccctgctg
gataagagcaaccgggactctgagctgtaccgctacaacatcgtccagatgaacgccgtg
tccgccgctcagacggcgctcagcaagtacacagagaggatccagactgaccctgatgcc
ctgatcatgctgggtttcctcaacgaacacctgcagctgaagacacaggcactgcaggcc
taccagagggccgtggagctcctccagtcggggcctcctacagacgagctggccttcgct
ctgggcagcctcggtcgcgcgttgtgctcctcagggcagtgggaggaggcggtgcgcgtc
tactcctccacccctctgcaggagctccaggacctggcggggctggctctggcccactgc
agggcaggacacataccagagagcatcaacgcctacgagcgtgccctggccatcgcttcc
agtgagaaggagaaggcctacatcctgaccgccctggccctgcttcagcaccggctgggc
ggcctggactccgccaagacgctgctcttcaaatgctcaatgctgaaggagcccatcccg
gagtccctgctgtgtctgtgtgcgctgggcctggaccacggcgacgccacgctggccgct
gccgccctcacggagctgctgaagcagggcacggccaccgggggcgccgtggagcagcgc
tgcctgctcacctgcgccctgctggctctgcagggcaactacagcggcgtgcagcgggag
gcgtcccgggcagtgcacagcaatcccggaaacccttcactctgggctctactgtccaga
ctggtcccacagtactgcccaaagaaagcaaatggtggcgcagtggccggccatgtcgcc
tgtctcgccagcatgacacaaggaaagagggcgctgttgtacagtggcgtgaaccagctg
gcaggcggcagacactctggagaagacaggcatagaaatgccctgaagaccatgcagaga
gcagtgctgctctgtcctgacgatccggccgcatgggccagcctcatggccgcctgccac
acggagaacgccgcccgtttcctctcccagaacgccacccgcaccgaggggctggagccc
acgctcatggcggtggtctccgagaaagtgcgctgcgtggaggagatagagcggcccctg
gcgcaggctttggaggcctgggtgctgcagcaggctctcgctggcctcacacttgggggg
aggctggatgaggcagaggccctctgcgcacaggtgctgagcgtctctccggagcaccct
gccattgtgctgtccctgaggcgggtgcagtgccagcgcctcctgctggccggggcgggt
accgtgctgccggacgccgtgctggagcagctcagcagcagcgtcatggttaaccccacc
aacctcggggcttggcattggctggccgagctgtaccgtagccagggcctgctgatccag
gccgtgatggcctacagacagagcctgcagctcgcctcccagctgtgcctgcccagtgca
cagatagccagcctgctgggcttggccctgctggccctggggccgtgcatggctggtgtc
catggcaacgagtggaatgagcttgttctggaagccacttcggaggctctgaagctggct
tcctcctccatggcgcttctcttgcaggcacttcttcagtttgctaccaagatgggggct
agggagaccaggcgccagctggagagactggcctaccctccctgtccgggggagcaggcg
ggcagcgtggtgcaggtggcccgctggtacctcctcaaacacctccacgccaagaacgac
caggagctgatggacactcttctggaacatgccaaagggagcggagaccagagattgctc
actttgtattcacatctcacctcctcatcttcctaa
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integrated database retrieval system
