Gadus morhua (Atlantic cod): 115545087
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Entry
115545087 CDS
T10832
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115545087 (apex2)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115545087 (apex2)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115545087 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
115545087
NCBI-ProteinID:
XP_030213759
Ensembl:
ENSGMOG00000019681
LinkDB
All DBs
Position
1:complement(10779891..10782415)
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AA seq
574 aa
AA seq
DB search
MKIVTWNINGIRAYKGGIKKALQSLDADIICLQETKVTRDLLDERTAVVEGYNSYFSFSR
GRSGYSGVATYCKDSVAPFAAEEGLTGLLTNHEGAVGCYGDPMEFCDDELQLLDNEGRAV
ITQHQYMCKNQIQKVTVVNVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKAGSHVIIL
GDVNTSHRTIDHCDPSDLDNFDEHPGRKWLNVFLRAESKSESGRENEGSSTDDVLNNGGK
FIDTFRYFHPERTHAFTCWNTLTGARQTNYGTRIDYIFADVQLAKEQFTAADILPEVEGS
DHCPVWAKLCCTLLASPKLPALCTRYLPEFAGKQQKLSHFLVKVDPKPMRTESRDSLPSS
QEAGEKRENLKPLGAAESSLGKKRPLAPGSGTPKGKKSNVTKTSAKLPPPQGSLLAFFKP
KASSGAPILKASEASSAADPNPLPRSQKSQMVQLNHTKVVNGVCDSSTMHTSSRPLEEST
GETPRETKAEQRIAESTVAPKGPKGASLGFWKSVLHGPPPAPPCKVHRETSVLRTVKKEG
PNLGRQFFVCARPQGHASNPEARCNFFAWVDMGK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacttggaatatcaatgggatacgagcttacaaaggcgggatcaagaaa
gccctccaatcattggacgcagatataatctgtctgcaagaaactaaagtgacaagagac
ctgcttgatgaaagaaccgctgttgttgagggctacaactcttatttcagcttcagtcgt
gggcgcagtggctattcaggggttgctacttactgcaaagactctgttgctccgtttgct
gctgaggaaggtctcactggtttgctgactaaccatgaaggggccgttggatgttacggg
gaccctatggagttctgtgatgacgagttgcaacttctggataatgaaggacgagctgtt
attacacagcatcaatacatgtgcaaaaaccagatacagaaggttactgtagtgaatgtt
tactgcccacgtgctgatcctgagaagccggaacgtaaacagttcaaattgcagttctac
aagttgcttcagagtcgggctgaagccatattgaaggctggaagccatgtcatcatctta
ggagacgtgaacacatctcacagaaccattgaccactgtgaccccagtgaccttgataac
tttgatgagcaccctggaagaaaatggctgaacgtttttttaagggctgaaagtaaaagc
gagtcggggagagagaacgagggatcgtccacagatgacgtcctcaacaacggcgggaaa
ttcatcgataccttccgctatttccatccggagcgcacacatgccttcacctgttggaac
acgctcaccggggcccggcagaccaattacggcactcgcattgactatatattcgccgac
gtccagctggccaaagagcagtttacagcagcggacatcctgccagaggtggaaggctca
gaccactgccccgtgtgggcgaaactctgctgcacacttttggccagccccaaacttcct
gctctctgcacccgctacctgccagagtttgcaggcaagcagcagaaactctctcacttt
ctggtgaaggtggacccgaagcccatgagaactgagtccagggattcgctacccagttct
caggaggccggggagaagcgggagaacttaaagccgctaggagcagcggagagcagtttg
ggaaagaaaaggcctttggcaccggggtctgggacaccgaaagggaagaagagcaacgtg
accaagacctcagccaagctgccacccccacagggcagcctgctcgccttcttcaaaccc
aaggcttcgagtggagctccgattctgaaggcatcagaagcatccagcgcggctgaccca
aacccacttccccgatcacaaaaatcacaaatggtccaactcaaccacaccaaagtggtc
aacggtgtctgtgactcctccacgatgcacacctccagccgccctctagaggagagtacc
ggggagacgccgagagaaaccaaggccgaacagcggattgcagaatccacagtggctcct
aaagggccaaagggagcttcgctggggttctggaagtccgttcttcatgggcctccgcca
gcccccccgtgcaaggtccacagagagactagtgtactgcgcaccgtcaagaaggaagga
cctaatttgggcagacagtttttcgtttgtgcccgaccacagggacatgcctccaatccc
gaagctcgatgtaacttctttgcgtgggttgacatggggaagtag
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