Gadus morhua (Atlantic cod): 115545194
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Entry
115545194 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115545194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115545194
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115545194
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115545194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-C3HC4_4
zf-rbx1
DZR_2
Pellino_RING
DUF1272
zf-RING_11
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
115545194
NCBI-ProteinID:
XP_030213984
Ensembl:
ENSGMOG00000031340
LinkDB
All DBs
Position
6:26446985..26451125
Genome browser
AA seq
416 aa
AA seq
DB search
MAETPFEDLITDVTILVDETDYTDKSQLKEILRDSHSSTGTTRSSYKISGSDQEIEELFM
KLCTLGRPIKAVVAAPVMEYIKKRHSAELNKMKGSHVLTEELLSAETDSITMIFKPFNSR
VRESRVRLVRERFVTFYQRIASNLHVTNVDIKQDQCRDLQIQFPELVIYPQPFGATVRGS
YANIVSLQDFIQQKSLGLRDRQARRALEAPMHFTNNHVHSSSSASCEQLDEEETCVICME
VIRKAVKKTLNCKHSFCRGCLKKAFVYKPVCPTCGALYGTLKGTQPEGGEMSCSNQTSSL
PGYEKFGTITVRYNIPSGIQKEDHPNPGQTYGGASRVAYLPDSPEGQKVKELLQRAFKLR
LIFTVGQSSTSGRENVVTWNDIHHKTSISGGPTCYGYPDPDYLKRVQEELKLKGVE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactccgtttgaggacctcatcacagatgtcacaatccttgttgatgaaact
gactacacggacaaaagtcagctaaaggaaattctccgagattctcattcatcaactggt
acaacacgttcctcttacaaaataagtggctctgatcaggaaatagaagagcttttcatg
aagctgtgcaccctggggcgtcccatcaaggcagttgtggccgcacctgtcatggaatac
atcaagaaaaggcattctgcggaactaaataaaatgaaaggaagccacgtcctcacagag
gaactcctcagcgcagaaacagatagcataactatgatctttaaacccttcaacagtcgt
gttagggaatctcgcgtgcgtctggtcagagagcgatttgtcacattctaccaaagaatt
gcctcaaacctgcatgtgacgaatgtggacatcaaacaagaccagtgcagagacttgcag
atacaatttccagagcttgttatctatccccaaccgtttggggccacagtaagaggatct
tatgctaacattgtgtccttgcaggatttcattcaacagaaatccttaggcttgagagat
aggcaggcaaggagggcgcttgaagcaccaatgcatttcaccaacaaccatgtccatagc
tcttcttctgctagctgtgagcagttagatgaagaggaaacttgtgtcatttgtatggag
gtcatccgcaaggcagtgaaaaagactctgaactgcaaacactcattttgcaggggctgc
ttgaaaaaggcttttgtttacaaacctgtttgccctacatgtggagccctctatggcact
ctaaagggaacacaacctgaaggaggtgaaatgagttgcagtaatcaaacatcttctttg
cctggttatgagaagtttgggactatcactgtgcgttacaatattccaagtggaattcag
aaggaggaccaccctaacccaggacagacctacggaggagcgtcgcgcgtagcttacctg
cctgactcacccgaaggacagaaagttaaggagttactccaacgagctttcaagctaagg
ctcattttcactgtgggacaatcctccaccagcggcagagaaaacgtggtgacgtggaac
gacattcaccacaaaacctccatcagcggaggacccacttgctatggttacccagatcct
gattatctcaagcgtgttcaagaggaactgaaactgaaaggagttgaataa
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