Gadus morhua (Atlantic cod): 115545197
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Entry
115545197 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin-like
KO
K06757
neurofascin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115545197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115545197
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
L1 family
115545197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
Mucin
DUF3792
Motif
Other DBs
NCBI-GeneID:
115545197
NCBI-ProteinID:
XP_030213992
Ensembl:
ENSGMOG00000015532
LinkDB
All DBs
Position
1:1539564..1622684
Genome browser
AA seq
1371 aa
AA seq
DB search
MLAQGGQVALAVVSSLLLLLQQATSIEVPQDPKILQDLKQPPTIIKQSPKDFIVDPRDNI
IIECEAKGNPQPRFTWRRKGKFLNTGKDPRVNMRKRSGTLEINFRSGGRPEDYEGEYQCL
ASNDLGVAVSNKILLRVSKAPLWPKELLEPVLVSEGHSLVLACNPPPGLPPPLTFWMNSA
MIPIPQDRRVSMGLNGDLYFSNVLAKDAHTDYSCNARFLFTHTIQQKNPFSLKVQSAEPY
NDTSSYNSSDPYGGRRIPESMPTFLSPSGSESSKMVLRGQQLLLECIAAGLPTPSIKWFK
KGGDLPAQKVKFENHNKTLKIVSVSEEDAGEYVCLANNHVGGIRHNIHVQVKGAPYWLDK
PTNLVLAPDENGRLVCRASGNPRPQVQWLVNGEPVESSLPNPSREMMGDTIIFRSVQIGS
SAVYQCNASNQHGYLLANAFVSVLDMAPRILGPKSQLIKVIENNRTFLDCPFFGSPLPDL
RWFKNGQGSGLDGGHYRVYINGTLEIKRARTEDEGTYTCVASNIMGTVENQVILEVKEPT
RIVRGLEHQSAFRGSTARFDCKVKSDPSLPVTVSWLKDDSPLSLGWRLRRDEESLSIPNV
NEGDQGVYTCTAQSEIDQDVSSARLTVLEEVSFNPSVSSALPPDRPDPPMDLDLSDLAVR
SVRLTWIPGNDHNSVITQFLVQYEEDRWEPGSWQNLTSYPGDLNSVILQLSPFINYQFRV
IAINSVGQSAPSHPSPRYKTSGAPPDAIPSGLQGWGTKKNNMEISWEPLLNVERNGPNLH
YQLWWRRKDTGEAWSNVTTTGSKHVVHDTDTYVPYEIRIQALNDHGAGPTSNVATGYSGE
DKPTDAPTNLRVSNVDSTSVTIHWNPVDPSSVMGEFKEYRLYYWREASLLKGLRVSQEKM
TRGFYSIAQRPSAVLGGLVPFSHYRMLMVVANRGHEGPPSNTVEVRTKEGVPDAPKYFEI
VKRALDTIHLQWDKPLEPNGVLIGYQLKYHTVNGSKLGPYRLETFPPNITQYTMRLPDRA
TRYKFFLSALTQVGAGEAFTGEFPRSANEGSFTGPGTDAPGLVELTDDGDSTSVPPTPPP
LPPTTVAPTTISTTTSTTATTTTPSTTTTTAATTTTTEAPATTPLLVATKRPDQNVLVAP
GREIWNLTVKPNSNYANVNWTHNFPPGTTEFVIEFTLDSNGTVRTVPVKQQPPIKVGDLI
EGAKYRLRVYSHEHHDISSQSFTFETGTAYSKDQVDIATQGWFIGLMCAIALIILILLIV
CFIKRSRGGKYPVRDKKDLALDPVDQKEDGSFDYHSDEDNKPLQGSQASLDGPPKESDDS
LVDYGEGGDGQFNEDGSFIGQYTVKKDSKDETEGNESSEATSPVNAIYSLA
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgcagggcgggcaggtggccctggctgttgtctcatcactgctgctgctattg
caacaggccacatccatcgaagtaccacaagaccccaagattcttcaagacctgaaacag
cctcccaccatcataaagcagtcgcctaaggacttcattgtggatcccagagacaacatc
atcatcgagtgtgaagccaagggcaacccccagcccaggttcacatggcgacggaaaggg
aagttcctgaacacagggaaggacccccgggtgaacatgaggaagcgctcgggaacactg
gagatcaacttcaggagcggcgggcgccccgaggactatgagggggagtaccaatgcctc
gcctccaacgacctgggggtggccgtgagcaacaagatcctgctgagggtctccaaggcc
cccctgtggcccaaggagcttctggagccggtgttggtgtctgagggccattccctggtg
ctggcctgcaacccccccccaggcctgcccccccccctaaccttctggatgaacagcgcc
atgatccccatcccccaggacaggcgtgtgtcaatgggtctgaacggggacttgtacttc
tccaacgttctggccaaggacgcccacaccgactacagttgcaacgcccgcttcctgttc
acacacaccatccagcagaagaaccccttctccctcaaagtccagagtgcggagccgtat
aatgacacttcctcttacaactcctctgacccgtatggtggccgtaggatcccagagtcc
atgcccaccttcctgtctccgtctgggagcgagagctccaagatggtgctgagaggacag
cagctcctgttggagtgcatcgcagctggactccccacccccagcatcaagtggttcaag
aagggcggcgacctgcccgcccagaaggtcaagttcgagaaccacaacaagacactgaag
atcgtcagcgtgtcagaggaggacgccggcgagtacgtgtgtctggccaacaaccacgtg
ggaggcatccgccacaacatccacgtgcaggtcaaaggggccccctactggctggacaag
cccaccaacctggtgctggcaccggacgagaacgggcggctggtctgccgggccagcggg
aacccccggccgcaagtccagtggctggtgaacggggagccagttgagagctccttgcct
aaccccagccgtgagatgatgggggacaccatcatcttccgctcggtgcagatcggcagc
agtgctgtgtaccagtgcaacgcctccaaccagcacggctacctgctggccaatgccttc
gtcagcgtcctggatatggcccccaggatactgggtcccaagagccagctgatcaaagtc
atcgagaacaaccgcaccttcctggactgtcccttctttggctcgcctctgcctgatctg
cgctggtttaagaacggccagggcagcgggctggacgggggccactaccgggtgtacatc
aacggcaccctggagatcaagcgggcgcggacggaggacgagggcacatacacctgcgtg
gccagcaacatcatgggcaccgtggagaaccaggtcatcctggaggtcaaagaaccaacg
cgcatcgtgcgggggctggagcaccagtcggccttcaggggctccacggcgcgcttcgac
tgcaaggtcaagtccgaccccagcctgcccgtcaccgtgtcctggctgaaggacgacagc
cccctgtccctggggtggaggctgaggagagacgaggagtctctgtccatccccaatgtc
aacgagggcgaccagggtgtgtacacgtgcacggcccagtcggagatcgaccaggacgtg
tcgtccgcccgcctcaccgtgctagaggaagtctccttcaacccctcagtatctagcgcc
ttgcccccagaccgcccggaccctccgatggacctggacctgtccgacctggcggtccgt
agcgttcgtctgacctggatccctggaaacgaccacaacagcgtcatcacccagttcctg
gtccagtatgaggaggatcgctgggagcccggctcttggcagaatctgaccagctacccc
ggggacctgaactcggtcatcctgcagctctcccccttcatcaactaccagttccgggtc
atcgccatcaactcagtggggcagagcgcgcccagccacccctcgccccgctacaagacc
agcggcgcgccacccgacgccatccccagcggcctgcaggggtggggcaccaagaagaac
aacatggagatcagctgggagcccctgctcaacgtggaaaggaacggccccaacctgcac
taccagctgtggtggaggaggaaggacacgggcgaggcctggagcaacgtgaccacgacg
ggctccaagcacgtggtgcacgacaccgatacctacgtcccctacgagatcaggatccag
gcactgaacgaccacggcgccgggcccacctccaacgtcgccacaggatactccggggag
gacaagcccaccgacgcccccaccaacctgcgcgtgtcaaacgtggacagcacctcggtc
accatccactggaacccggtggaccccagctcggtcatgggggagttcaaggagtatagg
ctgtactactggcgcgaggccagcctgctgaaggggctgcgcgtgtcccaggagaagatg
accaggggcttctacagcatcgcccagcggcccagtgccgtgctgggagggctggtgccc
ttctcccactacaggatgctgatggtggtggccaacaggggccacgagggcccccccagc
aacaccgtggaggttcgcaccaaggagggagtgccggacgccccaaagtactttgagata
gtcaagagggccttagacaccatccacctgcagtgggacaagcccctggagccaaacggc
gtcctgattggctaccaactcaagtaccatacagtgaacggctccaagctagggccgtat
cgcctggagaccttcccccccaacatcacgcagtacaccatgcgtctgcccgaccgcgcc
acgcgctacaagttcttcctgtccgccctcacccaggtgggtgccggggaggccttcact
ggggagttcccccgctcggccaacgaggggagctttacaggccctggcaccgacgcccca
gggctagtcgagctaaccgacgacggcgactctacctctgtccctcctactcctcctccc
ctccctccgaccaccgttgctccgaccaccataagtaccacaacctctactactgctact
actacgaccccctccaccaccaccaccaccgccgctactacaaccaccaccgaggctccc
gccaccacccctctgctggtcgccaccaagcggcccgatcagaacgttttggtggccccg
ggtcgggagatctggaacctgacggtgaagcctaacagtaactacgctaacgtcaactgg
acccacaacttcccgcccggcaccaccgagtttgtcattgagttcacgctggacagcaac
ggaacagtaaggactgtgcctgtcaaacagcagccccccattaaggtgggcgacctgatc
gagggggccaagtatcgtctgcgggtgtactcccacgaacaccacgatatcagcagccag
tcgttcacctttgagaccggcacagcctacagtaaggatcaggtggacatcgccactcag
ggctggttcatcgggctgatgtgcgccatcgccctcatcatcctcatcctcctcatcgtc
tgcttcatcaagaggagtcgaggtgggaagtatccagtgcgagataaaaaggacctagcc
ttggacccggttgaccagaaagaggacggctcttttgattaccatagtgacgaggacaac
aagccgctgcagggcagccaggcatccctggatggcccgccgaaggagagtgacgacagc
ctggtggactacggcgagggcggagacgggcagttcaacgaggacggttccttcatcggc
cagtacaccgtcaagaaagactccaaggacgagacggagggcaacgagagctccgaggcc
acctcgcccgtcaacgccatctactccctggcgtag
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