Gadus morhua (Atlantic cod): 115545292
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Entry
115545292 CDS
T10832
Symbol
trmt2a
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmh03016
]
115545292 (trmt2a)
Transfer RNA biogenesis [BR:
gmh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115545292 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
PrmA
Methyltransf_15
RRM_1
Methyltransf_11
Ubie_methyltran
Methyltransf_32
Cons_hypoth95
Methyltransf_23
Methyltransf_4
N6_N4_Mtase
Methyltrans_SAM
AviRa
TRM5-TYW2_MTfase
RrnaAD
CMAS
Methyltransf_18
RRM_PARP14_3
Methyltransf_12
TPMT
YlqD
mRNA_G-N7_MeTrfase
Motif
Other DBs
NCBI-GeneID:
115545292
NCBI-ProteinID:
XP_030214155
Ensembl:
ENSGMOG00000007707
LinkDB
All DBs
Position
6:10202060..10208261
Genome browser
AA seq
614 aa
AA seq
DB search
MVEPPPAAPKIMEPSDDPTEDSATTIENPETKQAEVGKSDSEPSLYNYIKDELFTSEIYK
VEIQNLPKFVGFNDLKKFLSRHGLSPHKIKLFGRQTFAFVTFMNEEERDKAMKMVHGMLW
KGQVLSVRLAKPKADPIQRKRKQQQEEGGGPAAKRQDVEEDSEPFSVQIANVVTPLWKVP
YEEQLRRKQQEVEGVLQRLAKEIGNTNKAMAPWXFAQKGKYNNMCCPLEDIQPSPSLTEY
RNKCEFLISMGADGEDKTVGFRLGKYKGGSCAVVGPAETTHVSAEAKRVVAAFQKFIRTT
EYSTYSPETYDGHWKQLTVRTSRTKQAMAMIYFNPQKLAEEELDALKNSLRKFFTEGEGA
DSGVTSLYFVREGQRTAPKPEDSPCELVDGESSIQEELLGLKFRISPQSFFQVDRHTNRL
SLLYSKVGEWAQLDQDSTVLDVCCGTGTIGLSLAKRVKKVIGIEMCKEAVEDAKHNAKLN
GTTNVEFHVWKGRGTCSPKSSNALVSPNVTTQSSTTPRAGLHSKVVLAIRRAEHLKRLVY
VSCNAKAAMANFIDLCRAPSNRVRXAPFRPVRCMAVDLFPQTVHMEMVLLLGEAGLTAPR
NAADKQEEAVAKAQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggttgagccaccaccagcagcaccaaaaatcatggaaccatctgatgaccccacagaa
gactccgcgaccaccatcgaaaacccagagaccaaacaagcagaggttggcaagtctgac
tcagaacccagcttgtacaactacatcaaagatgagctcttcacctccgagatctacaag
gtggagatccagaacctgcctaagtttgtgggcttcaacgacctcaagaagttcctgtca
aggcacggcctcagcccgcacaagatcaagctgtttggcaggcagacgtttgccttcgtc
accttcatgaacgaggaggagcgcgacaaggccatgaagatggtccacggcatgctctgg
aagggccaggtgctcagtgtccgactggccaagcccaaggccgaccccatccaaaggaag
aggaagcagcaacaggaggagggaggtggaccagccgccaagagacaggacgtggaggag
gacagcgagcccttcagtgtccagatagccaacgtggtgactcctttgtggaaggtgccc
tatgaggagcagctacggcgcaaacagcaggaggtggagggcgttctgcagaggctggcc
aaagagatcggcaacaccaacaaagccatggcgccctggncttttgctcagaaaggaaaa
tataacaacatgtgttgcccactggaagacattcaaccatctccttcactgacggaatac
agaaacaagtgcgagttcctgatctcgatgggcgcagacggcgaggacaagactgtcggg
ttccgcctggggaagtacaaggggggctcctgcgccgtggtggggccagccgagaccacc
cacgtctctgccgaggccaagagagtggttgctgccttccagaagttcatcaggaccacc
gagtactctacgtacagtcctgagacgtacgacggccactggaagcagctcacagtgcgc
accagcaggaccaagcaggctatggccatgatctacttcaacccgcagaaacttgcagag
gaggagctggacgccctaaagaactcattgaggaagttcttcacagaaggagagggggca
gacagcggggtgacctccctttactttgtcagagaaggtcaaaggaccgcccccaaacca
gaggacagcccctgtgagctggtggacggagagagttccatccaggaagaactcctaggg
ctgaagttccggatatctcctcaatccttcttccaggtagatcgccacaccaacagactt
tcactgctctactcaaaagtgggggagtgggcacagctggaccaggacagcacggtgctg
gatgtctgctgcggcaccgggaccatcggcctgtccctggcaaagagggtcaagaaggtg
attggtatcgagatgtgcaaagaggctgtggaagacgctaaacacaacgctaagctcaat
ggtacgaccaatgtggagttccacgtgtggaaaggcagaggaacttgttccccaaaatcc
tcaaatgctctggtgtcgcccaacgttaccacgcaatcgtcgaccacgcccagagccggc
ttacactctaaagttgtgctggccatccggagagccgaacacctcaagaggctggtgtac
gtgtcctgcaatgccaaggccgccatggcaaacttcattgatctgtgcagagcaccatcc
aaccgggtgcgcngagcacctttcaggcctgtgcgctgcatggccgtggacctcttccct
cagaccgtccacatggagatggttctgctgctgggagaggctggactaacagctcccaga
aatgctgcagacaagcaggaagaggctgtggccaaggcccaatag
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