Gadus morhua (Atlantic cod): 115545386
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Entry
115545386 CDS
T10832
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115545386 (ttf1)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
115545386 (ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
115545386
NCBI-ProteinID:
XP_030214347
Ensembl:
ENSGMOG00000007122
LinkDB
All DBs
Position
6:22580276..22595544
Genome browser
AA seq
647 aa
AA seq
DB search
METLTSGNDGVVPHHSRKKRQSFPAGHTPLLDTPQTDEKELRKKEKKKRRLEAECTEIID
LDDDAGMGQGRTSNEAGQSATQGTTPRKKKKKQRIEAECTETIDLDNNDDRGMGKGCTSD
EATQETKPHKKKKKKKKKDLVLLHEEEKGEEHSEVPVVVETSISKKKKKHHNMTVEENIA
VVTTNDNSQNTVGPLAKAKNLKKKSVVVTESMDVTPDLGVERLEGQPVAGGGPLEDVPSH
KEKKSKKRIWNKEIQKGLRDELETLKMIELRLYVPGIDSRPPSVIQSMLRYDLTRFREFK
HKGIDLRSGRWLIEENNKIRENVADFLALTGIPSASHLFFPARLTDKEQKYIRKLRVANR
FTEKIADGIPRPCFKIYIRGRKIFDELNYKGRFTEEEDTLLKKKQLIHGNNWVAVSQGME
RSTFSIQKRFNMMKTVTGTWSPKERDVLEGAIKVHLKKLAAENQAGAAGDGASAGSGPEE
LWVTRRQLYHNLPWMSISEKVPGRSWVQCREKWFTILKPKIASRKEGQPGGFQRVRSRIT
LINTLYAMDLEDPAEIDWEQVSECVGNVTPYTTQKMLNMLKITSVPHSSVLTYSETIDFL
HDKVIPLLRSKVRMEDLCPLESEEVRQRYMLSHIFSEEEFVELDLTA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctaacgtctggaaacgacggtgtcgtccctcaccacagtcggaagaagagg
caaagcttcccagcgggacacacgccactgctggacacgcctcagacagacgagaaagag
ttgagaaagaaggagaagaaaaagagaaggctagaggctgagtgtacggagataatcgac
ctggacgatgacgcagggatgggccaggggcgcacatcaaatgaggccggtcagtccgcc
acccagggaacaacaccccgcaagaagaagaagaagcagaggatagaggctgagtgtaca
gagacaatcgacctggataataacgatgaccgagggatgggcaaggggtgcacatcagat
gaggccacccaggaaacaaaaccccacaagaagaagaagaagaagaagaagaaggaccta
gtactccttcatgaggaagagaagggagaagaacacagcgaggtgccagtggtcgtagaa
acaagtatttccaaaaagaagaaaaagcaccacaacatgaccgtcgaggagaacattgct
gtggtcacgactaacgacaacagccaaaacacggtgggaccgctggccaaggccaagaac
ctgaagaaaaagagtgtggttgtgacagagtcgatggacgttactccagacctgggcgtg
gagagactggaaggccaaccggttgcaggcggaggtccactggaagatgtaccttctcat
aaagagaagaaatcgaagaaaagaatttggaacaaagagattcagaaagggctacgagat
gaattagaaacactgaagatgattgagctgaggttgtacgttcctggaatcgattctcgc
ccgccttctgtcattcagagtatgctgcggtatgacctgacccgcttcagagagttcaag
cataaaggcattgacctgcgctcgggccggtggttgatagaggaaaacaataagatccgg
gagaatgtggcagacttccttgccctcaccggcatcccgtcagccagtcaccttttcttc
ccggccagactcacggacaaagaacaaaagtacatcaggaagttgcgggtggcaaaccgt
ttcacggagaagattgctgatggcatccccaggccatgcttcaaaatttatatccgaggg
cggaagatctttgatgaacttaactacaagggcaggtttaccgaggaggaggacactctg
ctaaagaagaagcagcttatccatggaaataactgggtagctgtctcccagggaatggag
cgcagtacattcagcatccagaaacgcttcaatatgatgaagactgtaacagggacgtgg
tccccgaaagaaagggacgtgctggaaggggcaataaaagtacatttgaagaagctggcc
gcagagaaccaggctggggctgccggggatggggccagtgccgggtctggcccagaggag
ctgtgggtcaccagacgccagctgtaccataatctgccctggatgtccatcagcgagaag
gtcccaggccggtcctgggtccagtgtcgagagaaatggttcaccattttgaagccgaaa
atcgcctctcgtaaagaagggcagcctggaggattccagcgtgtccgttccaggatcacg
ctcatcaacacgctgtatgcgatggacctggaggaccctgcagagatcgactgggagcag
gtgtccgagtgcgtgggcaatgtaacaccttacaccacccagaagatgctcaacatgctc
aaaatcaccagtgttccacactcgtctgtcctcacctactctgagacgattgacttcctg
cacgataaagtgatccccctgctgaggagcaaggtgaggatggaggatctctgccctctg
gagtcggaggaggttcgacaaaggtacatgctgtcacacatcttctctgaggaggagttt
gtggagctcgacctcaccgcctga
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