Gadus morhua (Atlantic cod): 115545451
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Entry
115545451 CDS
T10832
Symbol
gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
gmh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115545451 (gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
115545451 (gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115545451 (gtf2h2c)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115545451 (gtf2h2c)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115545451 (gtf2h2c)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115545451 (gtf2h2c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
Ham1p_like
HMBD
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
115545451
NCBI-ProteinID:
XP_030214491
Ensembl:
ENSGMOG00000005686
LinkDB
All DBs
Position
6:complement(26251885..26258372)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDEFGSLKATVEEILFQSKRKRALESHGQVRLGMMRH
LYVVIDSSRTMEDMDLRPNRLKATLKLMEAFVEEYFDQNPISQVGLITTKNKRAEKLTEL
AGNPKKHLAALKKARDAACVGEPSLYNSLNLAMQTLKHMPGHTSREIVVIFSSLTTCDPA
NIYELIKTLKSLKIRVSVIGLSAEVRVCTVLTRETGGTYHVCLDESHFKELLMFHVKPPP
ANAQSECSLIRMGFPQHTIASMCDQDSKPSFSMSHLDSTSEVGLSLGGYFCPQCHAKHTE
LPVECKICGLTLVSAPHLARSFHHLFPLEAFRETPLEELPADRFCHACQGKLKDKIVFTC
PFCSGVFCTECDLFIHDSLHCCPSCINSQHSN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaagagccaaacgttgggaaggaggctatgaaaggacatgggaa
gtgttgaaagaggatgaatttgggtcactcaaagctactgtggaggaaatattgtttcaa
tccaaaagaaaaagagcattggagagccatggacaagtgcggcttgggatgatgcggcat
ctttatgttgtgatcgactcttcgagaacaatggaggacatggacttaaggccaaaccgc
ctcaaagccactctgaagctgatggaagcattcgtggaggagtattttgatcaaaacccc
atcagccaggtgggtctgatcacaacgaagaacaaaagagcagagaagctgacggagctt
gcagggaatccaaagaagcacttggctgcccttaagaaggcaagggacgccgcttgtgtt
ggcgaaccatctctatacaactctctcaacctggccatgcagacactcaagcacatgcct
ggacacaccagccgggagattgtggtcatcttcagcagcctcaccacgtgtgatccagcc
aacatatatgagctgattaagaccctgaaatctctgaagatccgcgtgtctgtgattggc
ctatcggcagaggtgcgcgtctgcacggtgctgacccgcgagacgggaggaacgtaccac
gtctgcctggacgagagccacttcaaggagctgctcatgttccatgtcaagcctccgccg
gccaacgcccaatcagaatgctccttgatacgcatgggttttccacagcacaccatcgcc
tccatgtgtgaccaggactccaagccgtccttcagcatgtcccacctggacagcaccagt
gaggtgggcctgtctctgggaggatacttctgcccgcagtgccatgccaagcacacagag
ctgccggtggagtgcaaaatatgtggtctgaccctggtctcggccccccacctggcccgc
tccttccaccaccttttccccctggaggccttcagggagacgcccctggaggagctccca
gctgacaggttctgccacgcctgtcaaggaaaactgaaggacaaaatagtgttcacgtgt
cctttttgcagtggtgtgttctgtacagagtgtgacctcttcatccacgactctctgcac
tgctgcccctcctgcattaactcacagcactccaattga
DBGET
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