Gadus morhua (Atlantic cod): 115545475
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Entry
115545475 CDS
T10832
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04142
Lysosome
gmh04144
Endocytosis
gmh05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115545475
Exosome [BR:
gmh04147
]
Exosomal proteins
Proteins found in most exosomes
115545475
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115545475
NCBI-ProteinID:
XP_030214544
Ensembl:
ENSGMOG00000011629
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Position
6:complement(14118611..14144256)
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AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHNMTEEVMFWKWISVNTV
ALVTEATVYHWSMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNTTASTLFCFAVRSQAGGKLHIIEVGQPATG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLAG
AEELFARKFNTLFAQGSYSESAKVAASAPKGVLRTAETIRKFQGVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRVSPDQGLQFAQMLVQD
EEPLANINQIVDVFVEGSLIQQCTSFLLDSLKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRPHVAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQTLVELFESFKSYEGLFYFLGSIV
NFSQEQDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWATV
LEESSPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIQNLDRAYEFAENCNEPAVWSQLATAQLHRDLVKEAIDSYIKADDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFISGPNNAHIQ
QVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMM
SHPTDAWKEGLFKDTIAKVANVELYYKSLSFYLDFKPLLLNDLLAILSPRLDHSRAVTFF
SKVDQLKLVKAYLRSVQSHNNKGVNEALNDLLTEEEDFQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKEAELAETLLQWFLE
EGKKECFAACLLASYDLLHPDVVLELAWRHQIMDFAMPYFVQVMREYLAKVDKLEELESQ
RKTEDEVTEPQPIVFGQQLMLTGTTPAAVTPQVPYPGYGYAAPGFPPQPAYGFNM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatactgccgatacgttttcaggaacatctgcagctgcagaaccttggggtg
aacccggccaacatcgggttcagctacctgaccatggagtctgacaagttcatctgcatc
agggagaaagtgggtgatcagaaccaggtggtgatcgtggacatgtccgacccgacgaac
cccatcaggagacccatctctgctgacagtgccatcatgaacccagccagcaaggtcatc
gccctcaaagatgccgccaagaccctgcagatcttcaacatcgagatgaagagcaaggtg
aaggcccacaacatgactgaggaggtcatgttctggaagtggatttccgtgaacaccgtc
gccttggtgaccgaggccactgtctaccactggagcatggagggggactcgcagcccatc
aaagtgtttgatcgtcacgccagcctcgccggatgtcagatcatcaactacagaactgac
gagcaacagaagtggctgctgctgatcggaatctctgcacagcaaaaccgtgtggtgggg
gccatgcagctgtactccgtggacaggaaggtgtctcagcccattgagggtcatgctgca
gcgttcggggagttcaaggtggagggaaacaccaccgcctccaccctcttctgttttgct
gtgcgctcccaggcgggcgggaagttgcatatcatcgaggtgggtcaaccggcaacaggc
aaccaaccgtttgccaagaaagcggtggacgtcttcttcccaccggaggcccagacagac
ttccccgtagctatgcagatcggtacgaagcacggggtgatctacctgatcaccaagtac
gggtacatccacttgtacgacctcgagtccggcgtctgcatctacatgaaccgcatcagc
gccgagaccatctttgtgaccgcgccccatgagcccacctccgggatcattggggtcaac
aagaaggggcaggtgttgtctgtgtgtgtggaagaagagaatatagtcaactatgcgacc
aacgttttgcaaaacccagacctgggcttgaggatggctgtgaggtcaaacctagccgga
gctgaggagctgtttgccaggaagttcaacactctgttcgcacagggaagctactctgag
tctgctaaagtcgctgcctctgcccctaagggggtgctgcggaccgcagagaccatcagg
aagttccagggggtcccggcccagcctggccaggcctcgccccttctccagtactttggc
atcctcctggaccagggccagctcaacaagtttgagtctctggagctgtgccggcccgtg
ctccagcagggacgcaagcagctgctggagaagtggctcaaggaggataagcttgaatgt
tcagaggagcttggggacctggtgaaggcttcagaccccaccctggccctcagtgtgtac
ctcagagccaacgtccccaataaagtcatccaatgcttcgctgagactggacagttccag
aaaatagtgctgtatgctaaaaaggtgggctacacaccggactggatcttcctgctgagg
aacgtgatgcgggttagcccagaccaagggctgcagtttgcccagatgttggtccaggat
gaggagcccctggctaacatcaaccagatagtggacgtgttcgtggagggcagtctgatc
cagcagtgcacctctttcctgctggactccttgaagaacaaccgccccgccgagggccac
ctgcagacgcgcctgctggagatgaacctcatacacgcccctcaggtggcagatgcgatc
ctcgggaaccagatgttcactcactacgaccggccccacgtggcccagctgtgcgagaag
gcaggcctcctgcagagggccctggagcacttcaccgacctgtacgacatcaagcgggcc
gtggtgcacacgcacctgctcaaccccgagtggctggtgaacttcttcggctcgctctcg
gtggaggactcggtggagtgtctgcgggcgatgctctccgctaacatccggcagaacctg
cagctctgcgtccaggtggcgtccaagtaccacgagcagctgggcacccagaccctggtg
gagctctttgagtccttcaagagctacgagggcttgttttactttttggggtcgattgta
aacttcagccaagaacaggatgttcattttaagtacatccaggctgcttgtaagaccggc
caaatcaaagaggttgagaggatctgcagagagagcaactgctatgatccagaaagggtc
aaaaacttcctcaaggaggctaagctcacagaccagctccccctgatcatcgtgtgtgat
cgcttcgacttcgtccatgatctggttctctacctctaccgcaacagcctgcagaagtac
atcgagatctacgtacagaaggtgaaccccagccgtctgccagtggtgatcggggggctg
ctggacgtggactgtgccgaggacgtcatcaagaacctgattatggtggtgcgaggccag
ttctccaccgacgagttggtggaagaggtggagaagaggaacaggttaaagctgctgttg
ccgtggctggagtctcgcattcatgaaggttgcgaggagcccgctacccacaatgccttg
gcaaagatctacatcgacagcaacaacacccccgaacgcttcctgaaggagaacccgttc
tatgacagcgctgtggtgggccgctactgtgagaagagggacccccacctggcctgcgtg
gcctacgagaggggccagtgtgacctggacctcatcaaggtttgcaacgagaactccttg
ttcaagagtgaagcgcgctaccttgtgcgacggaaagatccagaactatgggccaccgtc
ctggaggagagcagtccctacaggagacagctcatcgaccaggtggtacagaccgctctg
tccgagacccaggacccggaggaggtgtccgtcacggtcaaggccttcatgacagccgac
ctgcccaacgagctcatagagctgctggagaagatcgtcctggataactctgtcttcagt
gagcacagaaacctccagaatttgctgattttgacggcgatcaaggccgaccgcacgcgc
gtgatggagtacatcaaccggctggataactatgacgcgccggacatcgccaacatcgcc
atcagcaatgagctcttcgaggaggccttcgccatcttcaagaagtttgacgtcaacacc
tcggccatacaggtgctgatcgagcacatccagaacctggaccgggcttacgagtttgca
gagaactgcaacgagccggcggtgtggagccagctggccacggcgcagctccaccgggac
ctggtgaaggaggccatcgactcctacatcaaggccgacgacccctcggcgtacatggag
gtggtcaacgccgccagcaaaaacaataactgggaagacttggtgaagttcctgcagatg
gctcggaaaaaggccagggagtcgtacgtcgagacggagctcatcttcgcgttggccaag
accaaccgtctggccgagctggaggagttcatcagcgggcccaacaacgctcacatacag
caggtgggcgacaggtgttacgaggagggcatgtacgacgcggccaagctcctgtacaac
aacgtgtccaacttcgcccggctggcctccacgctggtgcacctgggagagtaccaggct
gccgtggacagcggcaggaaagccaacagcacccgcacctggaaggaggtgtgctttgcg
tgcgtggacggtgaggagttccggctggcccagatctgcggcctgcacatcgtgatccac
gccgacgagctggaggagctcatcagctactaccaggaccggggctacttcgaggagctg
atcgccctgctggaggcggcgctgggcctggagcgcgcccacatgggcatgttcaccgag
ctggccatcctctactccaagttcaagccccagaagatgagggagcacctggagctcttc
tggtctcgggtcaacatccccaaggtgctgcgtgcggcagagcaggctcacctgtgggcg
gagctagtgttcctctacgataagtacgaggagtacgacaacgctgtcctcaccatgatg
tcacaccctacagacgcatggaaagagggtcttttcaaagacaccatcgccaaggttgcc
aacgtggagttgtactataaatccctctcattttacctggacttcaagcccctgctctta
aacgacctgcttgctatcctgtccccgcggctagaccacagccgggctgtcaccttcttc
tccaaggtggaccagctgaagctggtgaaggcgtacctgaggtcggtgcagagtcacaac
aacaagggagtgaacgaggcgctgaacgacctgctgacggaagaggaagacttccagggc
ttaagggcgtccatcgacgcgtacgacaactttgacaccatcggactggcacagaggttg
gagaagcacgagctgattgagttcaggcggatcgccgcctacctctacaagggcaacaac
cgctggagacagagtgtggagctctgcaagaaggacaaactctacaaggatgcaatgctg
tacgcggccgagtcaaaggaggccgagctggccgagactctcctccagtggttcctggag
gaaggaaagaaggagtgcttcgccgcctgcctgttggcgtcctatgacctgctgcacccc
gacgtggtgctggagctagcctggagacaccagatcatggacttcgccatgccctatttt
gtccaggtcatgagggagtacctcgccaaggtggataagctggaggagctggagagccaa
aggaaaactgaagacgaggtcactgagccccagccaatcgtgttcggtcaacagctgatg
ctgaccggcaccacgccggctgctgtgactccccaggtgccctacccaggctacggctac
gccgctccgggcttccctcctcagcccgcctacggcttcaacatgtaa
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