Gadus morhua (Atlantic cod): 115545518
Help
Entry
115545518 CDS
T10832
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03320
PPAR signaling pathway
gmh04148
Efferocytosis
gmh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115545518
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115545518
03320 PPAR signaling pathway
115545518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115545518
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmh03310
]
115545518
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115545518
Nuclear receptors [BR:
gmh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115545518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
115545518
NCBI-ProteinID:
XP_030214648
Ensembl:
ENSGMOG00000009702
LinkDB
All DBs
Position
6:2158723..2169634
Genome browser
AA seq
441 aa
AA seq
DB search
MSSQQPNSSASNSPTSILGSPFSVISPSLGSQSVTSSLGFGPINSSQINSPVSGMHAISS
SDDVKPPFGLRPMSAHSPGIMLSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDL
SYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQKCKELRKALAVQEERQR
NREREGELECSMAVNEEMPVEKILEAETAVEQRTELHSDGGSATSSPHDAVSNICQTADK
QLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIALKDGVLLASELHRDN
AMHSAGVAAIFDRESIQSAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAK
GLSNTAEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQLS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcagcccaacagctccgcctccaacagtcccacctccatcctgggctcc
cccttctccgtcatcagcccctctctgggctctcagtccgtcacgtcctccctgggcttt
ggacccatcaacagcagccagatcaactcgccggtgtccgggatgcacgccatcagcagc
tctgacgacgtcaagcccccgttcggcctgcggccgatgtccgcccacagccccgggatc
atgctgtcccagaagcgcctgtgtgccatctgtggagaccgctcctcagggaagcactac
ggcgtgtacagctgcgagggctgcaagggcttcttcaagcgcacggtgaggaaggacctg
agctacacctgcagggacaacaaggagtgtctggtggacaagaggcagaggaaccgctgc
cagtactgccggtaccagaagtgcctggccatgggcatgaagagagaggtggtccaagat
gaacgtcagaaatgtaaggaattgagaaaggctcttgcggtgcaggaggagcgccagagg
aaccgtgagcgtgagggcgagctggagtgcagcatggcggtgaacgaggagatgcccgtg
gagaagatcctggaggcggagacggcggtggagcagcggacagagctgcactcggacgga
ggctccgccaccagctctccccacgacgccgtgtccaacatctgccagacggcggacaag
cagctgttcgccctggtggagtgggccaagaggatcccccacttcagcgagctgcccctg
gacgaccaggtcatcctgctgagagcaggatggaacgagctcctcatcgcctccttctcc
catcgctccatcgccctgaaggacggagtcctgctggcctctgagctgcacagggacaac
gccatgcacagcgcaggagtggcagccatctttgacagggagagcattcagagtgcagaa
gtgggggcaatatttgaccgggttctcaccgagctcgtcagcaaaatgagagatatgcaa
atggacaagacggagctaggctgtctccgagccatcgtcctctttaacccagatgctaaa
gggctgtccaacaccgctgaggtggagctcctcagggagaaggtctatgcatcactggaa
gcctactgcaaacagaagtaccccgaacagcagggaaggtttgccaagctcctgctacgc
ctgcccgcactgcgttcgattggcctgaagtgcttggagcatctgttcttcttcaagctg
ataggtgacacacccatcgacacgttcctcatggagatgcttgaagcgccccaccagtta
tcttag
DBGET
integrated database retrieval system
