Gadus morhua (Atlantic cod): 115545533
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Entry
115545533 CDS
T10832
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
115545533 (exosc10)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115545533
NCBI-ProteinID:
XP_030214685
Ensembl:
ENSGMOG00000006131
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Position
1:29978263..29994666
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AA seq
898 aa
AA seq
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MKASRRKDPSNGGPQAETPTEHDADEEAEDFCPGYKDVDAFTKYALGSVLSATKASASLP
QTGDDFDYYRSFPGFREFCETQGDRLLHCMSNIMQHHGCRSHIRDNNKLTGLEDKFDLLV
DSNDVILEKVGILLDEADGVNRSQKPVMPVGYQPPKIVVSSWNRKGADSRGSETFRLLQA
RNITRPQMKFKEKVDNSNIPFVPKIFIKPNATKPLPSYFTNKQIRKERPEDLDVPAALAD
FIHQQRTQEHVEDMFAHPYQHELDHLTVPERLLSKTEPQMFRPMEETKCSFIDTLEELVA
LNETLCKVSEFAVDLEHHSYRSFLGLTCLMQISTREQDYIIDSLELRGELYLLNEVFTDP
DIVKVFHGADSDIEWLQKDLGLYVVNMFDTHQASRALQHARHSLDHLLQQLCHVKSDKRF
QLADWRIRPLPEEMFEYARADTHYLLYIYDRLRGELLDFNHGQPALLQSVWHKSKDISLK
KYSKPIFTEESYQDLQKRQKRAFNTQQLSAFRLLFAWRDKLGRQEDESTGYVLPNHMMIK
IAEQLPKEPQGIIACCNPVPPLVRQQVIELHLLVQQAREMPLLKAEIVAQTKKGFTPIKK
ADGSLFGPHDTSRTAEADGSLCLPHESSSSDELPEKKQGTLFSEPEPETDMETQYDSSLV
ARATVTIFEDLAPGSAALSVAKQKAGRIIEAFQNPFRMYLPSLDVHVNKAAKLDPSSKVY
EISQRWKLQSMEQQQKEQEAKRTAREKTKEKARKAAGERKKAKLDYQQSLKDVATVRQQV
AEAASKKEEGEGKKRMVSEEGQSTPRPPKKSKAAQKAPEESASPQPDFKPFDYTSSNLKV
FAGANARAGSQFDPNKPYHDPTKKKNPRNNRPNLAGNKSMSYMAGKSDRGARQNWPKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcttcgaggagaaaagacccctctaacggggggccgcaggccgaaacacccacc
gaacatgacgcggatgaagaggcagaagacttctgccccggatacaaggacgtggacgcg
ttcaccaaatatgcattgggttcagtgttgtcagccacgaaggcttccgcttccttgcct
caaaccggagatgacttcgactactatcgcagcttcccagggttcagagagttctgtgag
acccaaggagaccgcctcctgcactgcatgagcaacatcatgcaacaccatggctgcaga
tcgcacatacgggacaacaacaagctcacaggtctggaagataagtttgacctgctcgtg
gactccaacgatgtcatcctggagaaagtgggcattctgctggatgaggcggacggggtg
aaccgcagccagaaacctgtcatgcccgtggggtaccagcctcccaagatcgtggtttcc
agctggaacagaaagggggcggactcccggggttccgagacgttccgtctgctccaggcc
cggaacatcacccggccgcagatgaagttcaaagagaaagtggacaacagcaacattccc
ttcgttcccaagatcttcatcaagcccaacgccaccaaacctcttccatcctacttcacc
aacaagcagatccgtaaggagcgtcccgaggacctggacgtccccgccgcgctggccgac
ttcatccaccagcagcggacccaggagcacgtggaggacatgtttgcgcacccataccaa
catgaacttgaccatctgacggttccagaaagactgctctcaaagacggaacctcagatg
ttcaggcccatggaggagaccaagtgctctttcatcgacaccctggaggagctggtggcg
ctgaacgagacgctgtgcaaagtgtcggagtttgccgtggacttggagcaccactcctac
aggagcttcctgggcctcacctgcctgatgcagatctccacccgggagcaggactacatc
atcgacagcctggagctccgcggggagctgtacctgctcaacgaggtgttcaccgacccc
gacatcgtcaaggtgttccacggcgcggactcggacatcgagtggctgcagaaggacctg
gggctgtacgtggtgaacatgttcgacacgcaccaggccagccgcgccctgcagcacgca
cgccactccctggaccacctgctccagcagctctgccacgtcaagtcggacaagcgcttc
cagctggccgactggaggatccggcctctgcccgaggagatgtttgagtatgcgcgggca
gacacccactacctgctctatatctacgaccgcctgaggggggagctgttggacttcaac
cacggccagccggccctgctgcagagcgtctggcacaagagcaaagacatctccctcaag
aaatacagcaagcccatcttcacggaggagtcgtaccaggacctccagaagaggcagaag
agggccttcaacacccagcagctgtctgccttcaggctgctgttcgcctggagggacaag
ctcggccgccaggaggacgagagcaccggatacgtgctgcccaaccacatgatgatcaag
atcgccgagcagctgccaaaggagccccagggcatcatcgcctgctgcaaccccgtgccg
cccctggtgcggcagcaggtgatcgagctccacctcctggtgcagcaggctcgcgagatg
cccctcctcaaggcggagattgtggcacagacaaagaaaggcttcaccccgattaagaag
gcggacggctccctgttcggcccccacgacacctccaggacggccgaggccgatggctcg
ctgtgcttaccccacgagtcgtcgtcctccgacgagctgcccgagaagaagcagggcacg
ctgttctcagaaccagaaccggagacggacatggagacccagtacgacagcagtctggtc
gctcgcgccaccgtcaccattttcgaggacctggcgcccgggagcgcggcgctaagcgtg
gccaaacagaaggccggacgcatcatcgaggcgttccagaaccccttcagaatgtacctg
ccctcgctggatgtgcacgtcaacaaagccgccaagctggacccctcctcaaaggtctac
gagatcagccagaggtggaagctgcagagcatggagcagcagcagaaggagcaggaggcc
aagcggacggcccgggagaagaccaaggagaaggcccggaaggccgccggggaaaggaag
aaggccaaactggactaccagcagtccctgaaggacgtggccaccgtccgccagcaagtc
gccgaggcggcgtcgaagaaggaggagggggaggggaagaagaggatggtcagcgaggaa
ggacagtcgacccccagaccccccaagaagtccaaggccgcgcagaaggccccggaggag
agcgcgtccccccagcctgacttcaaacccttcgactacacctcgtccaacctcaaagtc
tttgccggagccaatgccagggccggttcgcaatttgatcccaacaagccttaccacgat
cccaccaagaagaagaatcctcggaataacagaccaaacctcgccgggaacaaaagcatg
tcctacatggctgggaagtctgatagaggagcacggcagaactggcccaagagatag
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