KEGG   Gadus morhua (Atlantic cod): 115545643
Entry
115545643         CDS       T10832                                 
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
  KO
K04497  groucho
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04310  Wnt signaling pathway
gmh04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115545643
   04330 Notch signaling pathway
    115545643
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmh04812]
    115545643
Cytoskeleton proteins [BR:gmh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    ADF / Cofilin
     SCMC complex
      115545643
SSDB
Motif
Pfam: TLE_N WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F WD40_RFWD3 Transketolase_N HALZ
Other DBs
NCBI-GeneID: 115545643
NCBI-ProteinID: XP_030214858
Ensembl: ENSGMOG00000005865
LinkDB
Position
6:17955378..17977820
AA seq 786 aa
MFPQGRHPTPHQPPGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVVQAVERAKQVTMAELN
AVIGVRGLPGLPPTQHLSHAHAAAGGAASVPLTPHPAGLHPSQLGGSAGLLALSGALGAM
PTHHLAVKEGGDKKPHPSEPHPHPSGADHLRDREPGTSNAMLPESLRNSDKRRNGPDFLN
DSKKRKIEDKDSSHYDSDGDKSDDNLVVDVSNEDPSSPRGTPLPSPRENGLEKGRTLKKD
PCSPASTASSASSSSLKSKEMAMRDKAGTPGLKSTTPTPRGDSTPGPSSTPGLRPSLSKP
PSMEMPHPPTAGLRTPMAVSGPYPGAFGMLPHGAGMNGDLAGAAAYAAGLHNMSPQMSAA
AAAAAVAAYGRSPMVGFDPHSHMRVAGLPPSLTGIPGGKPAYSFHVAADGQMQPVPFPPD
ALVGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL
DCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISP
DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD
LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVTKPDKYQLHLHESCVLSL
QFASCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKAT
VYEVIY
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgttccctcagggccgacacccgacgcctcaccagcctccagggcagcccttcaagttc
acaatccccgagtcactggaccggatcaaggaggagtttcagtttctgcaggcgcagtac
cacagtttgaagttggagtgtgagaagcttgctagtgagaagacagagatgcagagacac
tatgtcatgtactacgagatgtcctacgggctcaacatagagatgcacaaacagactgag
attgccaagagactaaacaccatctgtgcccaagtcattcccttcctctctcaggagcat
cagcagcaggtggtccaagctgtggagcgagccaagcaagtgacgatggcagagcttaac
gctgtcatcggcgtgcgtggcctcccaggcctgcccccaacgcagcacctctcccacgcc
cacgccgcggccggcggcgccgcctccgtgcccctcacgccccaccctgccgggctgcat
ccctctcagctggggggctcggcgggcctcctggcgctgtcgggggccctgggagccatg
cccacccaccacctggcggtgaaggagggcggcgataagaagccccacccctccgagcct
cacccccacccctccggggccgaccaccttcgagaccgagagccgggcacaagtaacgcc
atgctgcccgaaagcctgaggaactctgacaagcggcgaaacgggccggacttcctcaac
gactcaaagaaacgcaaaatagaggacaaggactccagccactatgacagcgacggggac
aagagtgacgataacctggtggtggacgtctctaatgaggacccgtcgtcaccccggggc
acgcctcttccctctcccagggagaacggcctggagaagggacgcaccctgaagaaggac
ccctgcagcccggcctccacggcctcctcggccagctcgtcctcactcaagtccaaagag
atggccatgcgtgacaaggcaggcacgccagggttaaaatcgaccacacccacaccaaga
ggagactccacccctggaccaagctccacccctgggttacggcccagcctatcaaaaccc
ccctccatggaaatgccccacccaccaaccgcgggcctgcggacccctatggccgtgtcc
gggccgtacccgggtgcgttcggtatgctgccccacggggcggggatgaacggggacctg
gcaggcgcggccgcctacgccgccggactgcacaacatgtcgcctcagatgagcgccgcc
gctgcggccgccgccgtcgcagcgtacggccgctcccccatggtcggcttcgacccccat
tcccacatgcgggtggctggcctaccgcccagtctgaccggcatccctggaggcaaaccg
gcgtactccttccacgtggcggccgacggccagatgcagcccgtcccgttcccaccggac
gctctggtgggcccgggcatccctcgccacgcccgtcagatcaatacgctgaatcacggc
gaggtggtgtgcgcagtcaccatcagcaaccccacccgccacgtctatacgggcggcaag
ggctgcgtcaaggtctgggacatcagtcaccccggcaacaagagccccgtctcccagctc
gactgtctgaaccgggataactacatccgctcctgccgtctcctacccgacggccgcacg
ctcatcgtgggcggcgaggccagcacgctgtccatctgggacctggccacgcccactccc
aggatcaaggcggagcttacgtcgtcggcgccggcgtgctacgccctggccatcagccct
gactccaaggtgtgcttctcctgctgcagtgacgggaacatcgccgtgtgggacctccac
aaccagacgctggtcaggcagttccagggacacacggacggggccagctgtatagacatc
tccaacgacggcaccaagctgtggaccgggggcctggacaacacagtccggtcctgggac
ctgcgggagggacggcagctccagcagcacgacttcacctcccagatcttctctctgggc
tactgtccgaccggagagtggctggccgtgggcatggagagcagcaacgtggaggtcctc
cacgtcaccaagcctgacaagtaccagctgcacctccacgagagctgcgtcctctccctg
cagtttgcctcctgcggtaaatggttcgtgagcactggaaaagacaacctactgaacgca
tggagaacgccgtacggtgccagcatattccagtccaaggagtcttcgtcggtgctgagc
tgcgacatctcagtggatgacaagtacattgtcactggctcaggggacaagaaggccacc
gtctatgaagttatctactag

DBGET integrated database retrieval system