Gadus morhua (Atlantic cod): 115545706
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Entry
115545706 CDS
T10832
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
KO
K10803
DNA-repair protein XRCC1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03410
Base excision repair
Brite
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
115545706 (xrcc1)
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Gene cluster
GFIT
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NCBI-GeneID:
115545706
NCBI-ProteinID:
XP_030214971
Ensembl:
ENSGMOG00000012878
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Position
6:5790323..5802246
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AA seq
619 aa
AA seq
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MPEIKMKHVVSCSSEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQLEKEDQIHSIDI
GNEGSAFIEVLVGNSSSTRDQDYEVLLVTSSFMSPTESRNNTNTGRVRFFGPSQLQKTPA
QEKWDRVKIVCSQPYSKNIAYGVAFVKFHSPPDKNDPPTTTPPKLTKLGQFRLKDESPPA
STSLQPGSLFFNRENTKPSPAPKVSPQNDKLSYAAAALQTGGGSQPSKSPQQAVKKKFEF
SKERQDAPAASPSTKATPPGSPERKPPTPKATAKNPTPKATPKTTTPTPKAKASPAAPSS
SSKASTQKVDSRRREGGSRPSGSDPVPLNRVLEGVVFVLSGFQNPFRAELRDKALALGAK
YRPDWASDTTHLICAFANTPKYSQVKSAGGLIVRKEWVLDCHKRKCSISYKRYLMDGAED
SSGSEMELGKDSGDEQETRRTPQKPVRQPTPRKNIKIEEDEYGASTDIEEGAQDGDSAMD
TEDELQRVESDKPKAGEKKIKTEDPYGGSTDENTDAEEEQDLPIPELPDYLTGKRFFLFG
KFPNNERRLLLRYIAAFNGQVEDYMDQKVQFVVTSEGWQDSFEDALMENGNLNIVKPSWI
YAINDRQKMLPYQPYTVVP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgccggagatcaaaatgaaacacgtcgtctcctgcagtagcgaagacactacacacaag
gcggacaaccttctgagctccgacacgtatcggaagtggaaagctgcgcgtcccggagag
aagcagacctccgtcattctacagcttgagaaggaggatcagattcacagcatcgacatc
ggaaacgagggatctgctttcatagaagtcctggtggggaactcctcttctaccagggac
caggactatgaggttttgcttgtcacctcctccttcatgtcccctacagagagcaggaac
aacacaaacaccggccgggtccgcttctttgggcccagccagctgcagaagacccctgct
caggagaagtgggaccgggtcaaaatcgtgtgcagccagccctacagtaagaatattgca
tatggcgttgcctttgtcaagttccactccccgccagacaagaatgaccctccgaccacc
accccgccgaagctgactaagttgggtcagttccgtctgaaagatgagtctccccccgct
agcaccagcctgcagcccggcagtctcttcttcaaccgggagaacactaagcctagcccc
gcccctaaagtttctcctcagaatgataagttgagctatgcggctgcagcgttgcagact
ggaggaggatcacagccatcaaagtcccctcagcaggctgtgaagaagaagtttgagttc
agcaaagagcgacaggatgccccggccgcctcaccctccacgaaagccactcccccgggg
tctccagagaggaagccccccacccctaaagccaccgccaagaaccccacccctaaagcc
acgcccaagaccaccacgccaacccctaaagccaaggccagcccagccgccccaagcagc
agcagtaaagcctccactcagaaggtggactcccgtcgtcgggagggcgggtcccggccg
tcggggtctgaccccgttcctctgaaccgggtcctggagggcgtggtgttcgtcctcagc
ggcttccagaaccccttcagagccgagctgagggacaaagccctggccctgggggccaag
taccggcccgactgggcctcagacaccacccatctcatctgtgcctttgccaacacgccc
aagtacagccaggtaaagtcagcgggcggtctgatcgtgaggaaggagtgggtgctcgac
tgccacaagaggaagtgcagcatctcctataagaggtatctgatggacggtgcggaggac
agctcggggagtgagatggagctggggaaggacagcggtgacgagcaggagacccggcgg
accccccagaagccagtgagacagcccacacccaggaagaacatcaagatcgaggaagac
gagtatggagcatccaccgacatagaggaaggagcccaggatggggattctgccatggat
acagaggacgaactgcagagggtggagagtgacaagccaaaggcaggagagaagaagata
aagacggaggacccttacggaggttccactgacgagaacacggacgcagaggaggaacaa
gatctgccaatcccggagctccctgattacctgacagggaagaggtttttcctcttcggt
aaattcccaaacaacgagagacggcttctgctgcgctacatcgcagcctttaacggtcag
gtggaggattacatggatcagaaggttcagttcgttgtgaccagtgaaggatggcaggac
tcctttgaagacgcactaatggagaacggcaacctgaacattgtgaaaccttcctggatt
tatgccatcaacgacagacagaagatgctgccttatcagccctacactgtagtcccctaa
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