Gadus morhua (Atlantic cod): 115545771
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Entry
115545771 CDS
T10832
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115545771
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GFIT
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NCBI-GeneID:
115545771
NCBI-ProteinID:
XP_030215057
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Position
6:3975832..3986685
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AA seq
1081 aa
AA seq
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MLPLMSPSTIGCLLLFSHLGSAAVEFQHKIKSLLKKNFKCVSEGIAKEGQPRCLNDFYTE
LFITERGSGEVNKEHEVRLIETASRRLAKEETPIKCEDIFKPLPGRDQPIRTIMTTGVAG
IGKTVLTQKFAQDWAEDKANHDIHFTFLITFRELNLLKGKEFSLVKLLHHLFIETKEARI
CRFDLFQVVFILDGLDECRLPLDFQKHQTWTDVTKPTSVDMLLTNLIRGDLLPSARIWIT
TRPAAANLIPAECVDMVTEVRGFTDQQKEEYFRKKFREGTLASKIISHVKKSRSLHIMCH
IPVFCWITATVLEDIFKKSKRGEEVPKTVTQLYIQFLRVQSIQGGWKYHGRAETGSHWSS
KSRKIIVSLGKLAFYQLEKGNLIFYEEDLRECDINIKLASEYTGVFTQIFKEECGLYQAK
VFCFVHLSIQEFLAALYVFLSFFNKGVNLLSEEAPTSGEDELLHLYQHAVKKALQSENGH
LDLFLRFLLGLSLETNEIVLRDLLAQKKSRSLITKIKKVSYIKSKLNGYLSPERSINLFH
CLNELNDLSLVREIQHFLTSGSLSRESLSPAQWSALVFILLTSDEELDVFDLKKYSASEE
GLPRLLPVVKASKTSLLNNCQLSERCCEALASVLSSKSSSLRELDLSTNDLQDSGVKLLS
AGLGSPDCTLETLRLNGCKLSERCCEALASVLSSNSSSLTVLDLSTNDLQDSGVRLLSAG
LGSPHCTLETLRLNGCELSEGCCEALASVLSSNSSSLRDLDLSTNDLQDSGVKLLSAGLG
SPHCTLETLRLNACELSERCCEALASVLSSNSSSLRELDLSTNDLQDSGVKLLSAGLGSP
HCTLETLRLSGCLITQEGCASLASGLSSNPSHLRELDLSYNHPGDSGAALLSAGLEDPRW
RLDTLSVEHGGVWRLKPALKKYACELTLDPNTAHKYLSLSEDNRKVTRAGEDLWYPDHPE
RFDFWYQVLGREALTGRCYWEVEREGGVRIGVTYRGITRRGGGDDSLLGRNKKSWTLYCD
DDRYSAQYNGRTTALPLRAAGSTRVGVYLDRPAGSLSFYRVSPGGGGSSDTLTHIHTFWS
S
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactgatgtcaccatccactattggatgtcttctgttgttttctcatttagga
tctgctgctgtcgagttccaacacaaaattaagtctcttttgaagaagaatttcaagtgt
gtgtctgagggaatcgctaaagaaggacagcccagatgtctgaatgacttctacacagag
ctcttcatcacagagagaggcagtggagaggtcaacaaggaacatgaggtcagactgatt
gaaacagcttccaggagactggccaaggaggaaacaccaataaaatgtgaagacatcttt
aaacccttacctggacgagatcaaccaatcagaacaattatgacaactggagtggccggc
attggtaaaactgtcttaacacaaaagttcgctcaggactgggctgaagacaaagccaac
cacgacatacactttacatttctcataactttcagagagctgaatttactgaaagggaaa
gagtttagcttggtcaaacttcttcatcacctctttattgagaccaaagaagcacgaatc
tgcagatttgacctgttccaagttgtcttcatcttggatggtctggatgagtgtcgactt
cctctggacttccagaaacaccagacctggactgatgtcacaaagccaacctcggtggac
atgctgctgacaaacctcattagaggcgacctgcttccctccgctcgcatctggataacc
acacgccctgcagcagccaatctgatccctgctgagtgtgttgacatggtgacggaggtg
agagggttcaccgaccaacagaaggaggagtacttcaggaagaaattcagagaggggaca
ctggccagcaaaatcatctctcatgtcaagaaatctcgaagcctccacatcatgtgccac
atcccagtcttctgttggatcactgctacagttctggaggacatcttcaaaaaatcgaag
agaggagaagaggtgccaaagaccgtgactcagttgtacatccaattcctgagggttcag
tccatacaggggggctggaagtatcatgggagagctgaaacaggttcacactggagttca
aaaagcaggaagatcattgtttctctgggaaaactggctttttaccagctggagaaaggc
aacctgatcttttacgaggaagacctgagagagtgtgacatcaatatcaaattagcttca
gagtacacaggagtgttcacccagatctttaaagaggagtgtgggctgtaccaagccaag
gtgttttgctttgtccatctgagcatccaggagtttctggctgccctttacgtctttctg
tccttcttcaacaagggggtcaatctgctctcagaagaagcaccaacctctggtgaagat
gaactcctccacctctaccagcatgctgtgaagaaggccttacagagtgagaacggacac
ctggacttgttcctccgcttcctccttggcctctctctggagaccaatgagattgtccta
cgagatctgctggcacagaaaaaaagtagatcactgatcactaagattaagaaagtgtct
tacatcaagagtaagttaaatggatatctctctccagagagaagcatcaacctgttccac
tgtctaaatgagctgaacgatctttctctagtgagggagatccaacatttcctgacatca
ggaagtctctcaagagaatctctctcccctgctcagtggtcagctcttgtcttcatctta
ctgacatcagacgaggagctggacgtgtttgacctgaagaaatactctgcttcagaggag
ggtcttccgaggctgctgccagtagtcaaagcctccaaaacatctctgctgaataactgt
cagctgtcagagagatgctgtgaagctctggcctcagttctcagctccaaatcctctagt
ctgagagagctggacctgagtaccaatgatctgcaggattcaggagtgaagctgctctct
gctggactggggagtccagactgtacactggaaactctcaggttaaatggctgtaagcta
tcagagagatgctgtgaagctctggcctcagttctcagctccaactcctctagtctgaca
gtgctggacctgagtaccaatgatctgcaggattcaggagtgaggctgctctctgctgga
ctggggagtccacactgtacactggaaactctcaggttgaatggctgtgagctgtcagag
ggatgctgtgaagctcttgcctcagttctcagctccaactcctctagtctgagagacctg
gacctgagtaccaatgatctgcaggattcaggagtgaagctgctctctgctggactgggg
agtccacactgtacactggaaactctcaggttaaatgcctgtgagctgtcagagagatgc
tgtgaagctctggcctcagttctcagctccaactcctctagtctgagagagctggacctg
agtaccaatgatctgcaggattcaggagtgaagctgctctctgctggactggggagtcca
cactgtacactggaaactctcaggttgtctggctgcctgatcacacaggaaggctgtgct
tctctggcctcaggtctgagctccaacccctcccatctgagagagctggacctgagctac
aatcacccaggagactcaggagctgcgctgctctctgctggactggaggatccacgctgg
agactggatactctcagtgtggagcatggtggagtgtggaggctgaaaccagctctaaag
aagtatgcctgtgaactcacactggaccccaacacggcccacaaatacctctctctgtct
gaggacaacagaaaggtgacacgggctggagaggacctgtggtatccggatcacccagag
agatttgacttctggtaccaggtgttgggtagagaggctctgactggccgctgttactgg
gaggtagagagggaaggaggtgttaggataggagtgacatacagaggaatcacaaggaga
ggagggggtgatgacagcctgcttggacggaacaagaagtcctggactctttattgtgat
gatgatcgttactctgcccaatacaacggtagaacaacagccctccctctccgcgccgct
ggctctaccagagtaggagtgtatctggaccggcctgctggctctctgtccttctacaga
gtgtccccaggtggaggagggtcctcagacacactgacacacatccacaccttctggtcc
tcc
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