Gadus morhua (Atlantic cod): 115545854
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Entry
115545854 CDS
T10832
Name
(RefSeq) transcription factor COE2-like
KO
K09103
early B-cell factor
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115545854
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115545854
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
115545854
NCBI-ProteinID:
XP_030215180
Ensembl:
ENSGMOG00000012199
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Position
6:complement(19033690..19067393)
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AA seq
588 aa
AA seq
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MFGIQEHLIREIGGLKDRSLAEEMDPMRSWVRNVGVVDANAAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTAFVDFVEHEKEQSGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPITYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVTVDGHILAVSDNMFVHNNSKH
GRRARRLEPGESVENAMEYATPCIKAISPSEGWTNGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDKLAKEMLLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGAYPSQLGVSIGEPLQSSQGYIRNSSSLSPRGYSTASTPQHSSY
GSGGMSGGYGSVPMTSLGVPGSPGFSSASPTGSPYVMPSSPTITGGSSSSSSLLPFSSFP
STKQKSAFAPVLRPQGSPSPACPASGVSFRGSHPSHYLTPLSELTNAV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggattcaggagcacctgattcgagaaattggcggattaaaagaccgaagcctc
gcggaggagatggacccgatgcgctcctgggtcaggaacgtcggggtcgtggacgccaac
gcagcggcgcaaagcggtgtggcgttgtccagagcccacttcgagaagcagcctccctcc
aacctgcgcaagtccaacttcttccacttcgtgctggcgctgtacgaccgccacgggcag
ccggtggaggtggagcgcaccgccttcgtagacttcgtggagcacgaaaaggagcagagt
ggtgaaaagacaaacaacggaacacactacaagctgcagctcctctacagcaacggcgtc
cggacggagcaggacctttacgcccgtctcatcgactccgtcaccaaacagcccatcacc
tacgaaggccagaacaaaaacccggagatgtgcagagttctgctgacacacgaggtgatg
tgcagtcgctgttgcgagaaaaaaagttgtggaaaccgcaacgagacgccttctgacccc
gtgatcatcgacaggttcttcctcaagttcttcctcaagtgtaaccagaattgtctgaag
acggcggggaacccgagggacatgaggagatttcaggtggtcttgtccagcacggtgacg
gtagacggccacatcctggccgtgtccgacaacatgttcgtccacaacaactccaaacat
ggccgccgcgcccggcgcctggagcctggcgagtcggtggagaacgccatggaatacgcg
acgccctgcatcaaggccatcagccccagtgagggctggaccaacgggggagccatggtc
atcgtgatcggggagaacttcttcgacggcctccaggtggtgttcggcagcatgttggtg
tggagcgagttgataacgcctcacgccatccgagtgcagacgcctccgcgccacatcccc
ggcgtggtggaagtaacgctgtcctacaaatccaaacagttctgcaaaggcgccccgggc
cgcttcatctacacagccctgaacgagccgaccatagactacggcttccagcgcctgcag
aaggtcatcccgcgtcaccccggggaccccgacaaactagccaaggagatgctgctgaag
agggcggcggacctggtggaagctctctatggaaaccctcatagcaaccaggacatgctg
ctgaagcgcgcggcggacattgcggaggcgttgtacagcgtgccgcggccccacagccag
ctgcaggccctgcccagctccccggcccacggcagcgtcatgggcctgggggcctaccct
tcccagctaggggtcagcatcggggagcccctgcagagcagccaagggtacatccgtaac
tccagcagcctgtctcctcgtggctactccaccgcctccacccctcagcactccagctac
ggcagcggggggatgagcggggggtacggctcggtccccatgacaagtctgggggtcccg
gggtcccctggcttcagcagcgcctcccctacaggctccccctacgtcatgccatccagc
ccgaccatcacggggggctccagctcctcctcgtccctcctgcccttctcctccttcccc
tccaccaagcagaagagtgcattcgcccccgtgctgcggccccaggggtccccctccccg
gcctgccccgcctcgggggtcagcttcagggggagccacccctcgcactacctgaccccc
ctctccgaactcaccaacgccgtctag
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