Gadus morhua (Atlantic cod): 115546093
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Entry
115546093 CDS
T10832
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115546093
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115546093
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115546093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Myc_N
zf-RING_6
DUF4746
Motif
Other DBs
NCBI-GeneID:
115546093
NCBI-ProteinID:
XP_030215608
Ensembl:
ENSGMOG00000033489
LinkDB
All DBs
Position
6:complement(16275155..16286412)
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AA seq
545 aa
AA seq
DB search
MSDDSSGVFGSRGERSDGAGEASGGSSASRPAGGPDPERQSPHHRGNSSPESAGTTGRME
RLAGRKVTRKACNVDQRERGGFARIEGREERTVAGRSGESVGRLRGGEGDGGRSGRERTG
RTEAFKTAAHDEGRSGSPSTHTYAGILQPGGMGGRARSDGPRAWMTSSTPTTSSRPAPGP
KSTAALQRPPIRIWATPPHPPPPQQRSSQRPAHNADPPHRTPRTPAREPDPPWRLEARPR
SRSGAGRNRLPSGRRTLPGDEDDEDIQEGERGEEGVGEEEAGSWAGAGGNGVAEVISPAL
APAALTCSSVVESDRSRSRREKNRARSQRRRQRRREIWRQSRQQDSRQSSTSSSSSSNGE
EEEEEEEEEEEEEGGTRNSEGLICAVCLDVYFSPYTCHPCTHVFCEPCLRTLAKGSPANT
PCPLCRTTITHVFFQKELNQTVKTLFPMEYLSRKQNFQRASCAKWPLPSTRKLFRIFGGF
QRQTSSARRRFPHGGGYRLDDLDSDDETRGWHLDMDMAVIYIYSANWVIAFFIFFFLCYL
FFPSF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgacagctcaggtgtatttggttcgcgtggagagcgatccgacggagccggg
gaggccagcggaggcagcagtgcaagccgaccggccggcggtccggatccagagaggcag
agccctcaccacagggggaactcgagcccagagagcgcagggacaaccgggcgcatggaa
cggctggccgggaggaaagtgaccaggaaggcctgcaacgtggaccaacgagagaggggg
gggttcgctcggatcgagggcagagaggagaggaccgtggcaggcaggagcggggagagt
gtggggaggctcagggggggcgagggagacggggggaggagcggcagggaaaggacgggg
agaacagaggcgtttaaaaccgccgcgcacgacgaagggcgaagcgggagtccgtctact
catacgtacgctggcatcctgcagcccggtgggatgggagggagagcacgttctgatggg
ccccgggcatggatgacctcctccaccccaaccaccagctcgcggccagccccaggcccc
aagtccaccgccgccctccagcgccctccaatcagaatctgggcgacgcctccacatcct
cctccgccccaacagaggtcctcccagaggcccgctcacaacgcagaccccccccaccgc
acgccacgtacacccgccagagaaccagacccgccgtggaggttagaggccaggccgagg
tcgaggtcaggggccgggcggaaccgtctgccctcgggccgccggacactgccaggagac
gaggatgatgaagacatccaggaaggagagagaggagaggaaggggtaggggaagaggag
gccgggtcttgggccggggccgggggaaatggtgtggcggaggtgattagtcctgccctc
gcaccagcagcgctgacttgttcctccgtcgtcgagagcgacaggagcaggagtaggagg
gagaagaacagggcgaggagccagaggaggaggcaacggaggagggagatttggagacag
agtcggcagcaggacagcagacagagctccacaagcagcagcagtagcagcaatggtgag
gaggaggaggaggaggaggaggaggaggaggaggaggaaggaggtacgaggaacagtgaa
ggcctcatatgtgctgtgtgcttggacgtgtacttcagcccgtacacgtgtcacccatgc
acccacgtcttctgtgaaccctgcctgaggactctggctaagggcagtcctgccaacacc
ccctgccccctctgcaggaccaccatcactcatgtcttcttccagaaagagctcaatcaa
acagtgaagacattattccccatggaatacctctcccggaaacagaactttcagagggcc
agttgtgccaagtggccccttccgagcacaaggaagctgttccggatttttggaggcttc
cagcgacagaccagttctgccaggcgccggttccctcatggaggagggtaccgtctggac
gacctggactctgacgacgagacccggggatggcacctggacatggacatggccgtcatt
tacatctactcggccaactgggtcatcgccttcttcatcttcttcttcctctgctacctc
ttctttccctctttttaa
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