Gadus morhua (Atlantic cod): 115546105
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Entry
115546105 CDS
T10832
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115546105
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115546105
NCBI-ProteinID:
XP_030215639
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Position
6:4116389..4124178
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AA seq
914 aa
AA seq
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MIQSLSRPASVTTSNEATKYNEVDNCTGNIDMLPLMSPSTIGCLLLFSHLGSAAVECQHK
IKSLLMKKFKCVSEGIAKAGQPTGLNDFYTELFIKERGSGEVNKEHEVRLIETASRRPAK
EETTIKCEDIFKPLTDQDQPIRTIMTTGVAGIGKTVLTHKFTLDWAEGKANRNIHFTFLL
TFRELNLLKGKKFSLVELLHHLIIETKEAGIFRFDRFQVVFILDGLDESRLPLDFQNNQT
WTDVTKPISVDVLLTNLIRGDLLPSARIWITTRPAAANLIPAECVDMVTEVRGFNNPQKE
EYFRKRFREEKLASTIISHVKKSRSLHIMCHIPVFCWITATVLEDIFKTSKGGEEVPKTV
TQMYSHFLRVQSIQGGKKYHGRAETDPHWSSESKEIIVSLGKLAFNQLEKGNLIFYEADL
AECKIDIQSASEYTGVFTQIFKEECGLYQDRVFCFVHLSIQEFLAALYVFLSFINTGVNL
LSEEAQTSGEDKLLHLYQCAVDKALQSENGHLDLFARFLLGLSLKTNQIVLQGLLGWEKS
LKKGLLGQTGTSSLTNKETVSYIKKKINGDLSPERSINLFHCLNELNDRSLLKEIQQYLT
SGSLSRESLSPAQWSALVFILLTSEEELDVFDLKKYSASEKGLLRLLPVVKTSKTSLLNG
CKLSARCCEALASVLSSNSSSLRELDLSTNDLQNSGVKLLSAGLGSPHCTLETLRLNGCK
LSARCCEALASVLCSNSSSLRELDLSTNDLQDSGVELLSAGLGSPHCTLETLRLNGCKLS
EGCCEALASVLRSNSSSLRELDLSTNDLQDSGVKLLSAGLGSPHCTLETLRLNGCKLPER
CCEALASVLSSNSSSLRELDLSTNDLQDSGVKLLSAGLGSPHCTLETLRSVISLFFKQVI
LDSSKCCLCPMHFY
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgatccagtccttgtcacgaccagcttctgtaaccacaagtaatgaagccactaaatat
aacgaagttgataattgtacaggaaatattgacatgcttccactgatgtcaccatccact
attggatgtcttctgttgttttctcatttaggatctgctgctgtcgagtgccaacacaaa
attaagtctcttttgatgaaaaaattcaagtgtgtgtctgagggaatcgctaaagcagga
cagccaacaggcctgaatgacttctacacagagctcttcatcaaagagagaggcagtgga
gaggtcaacaaggaacatgaggtcagactgattgaaacagcttccaggagaccggccaag
gaggaaacaacaataaaatgtgaagacatctttaaacccttaactgatcaagatcaacca
atcagaacaataatgacaactggagtggccggcattggtaaaaccgtcttaacacacaag
ttcactctggactgggctgaaggcaaagccaaccgcaacatacactttacatttctctta
actttcagggagctgaatttgctgaaagggaaaaagtttagcttggtggaacttctccat
cacctcattattgagaccaaagaagcaggaatcttcagatttgatcggttccaagttgtc
ttcatcttggatggtctggatgagagtcgacttcctctggatttccagaacaaccagacc
tggactgatgtcacaaagccgatctcggtggacgtgctgctgacaaacctcatcaggggc
gacctgcttccctccgctcgcatctggataaccacacgccctgcagcagccaatctgatc
cctgctgagtgtgttgacatggtgacggaggtgagagggttcaacaacccacagaaggag
gagtacttcaggaagagattcagagaggagaagctggccagcacaatcatctcccacgtc
aagaaatcaagaagcctccacatcatgtgtcacatcccagtcttctgttggatcactgct
acagttctggaggacatcttcaaaacatcgaagggaggagaagaggtgcccaagaccgtg
actcagatgtacagccacttcctgagggttcagtccatacaggggggcaagaagtatcat
gggagagctgaaacagatccacactggagttcagagagcaaggagatcattgtttctctg
ggaaaactggcttttaaccagctggagaaaggcaacctgatcttctacgaggcagacctg
gcagagtgtaaaatcgatatccaatcagcttcagagtacacaggagtgttcacccagatc
tttaaagaggagtgtgggctgtaccaggacagggtgttttgctttgtccatctgagcatc
caggagtttctggctgccctttatgtctttctgtccttcatcaacacaggggtcaatctg
ctctcagaagaagcacaaacctctggtgaagataaactcctccacctctaccagtgtgct
gtggacaaggccttacagagtgagaacggacacctggacttgttcgcccgcttcctcttg
ggcctttctttgaagaccaatcagattgtcctacaaggtctgctgggctgggaaaaaagt
ctgaaaaaaggtctgctgggacagacaggaactagctcattgaccaataaggaaacagtg
tcttacatcaagaagaagataaatggagatctctctccagagagaagcatcaatctgttc
cactgtctaaatgagctgaacgaccgttctctattgaaggagatccaacagtacctgaca
tcaggaagtctctcaagagaatctctctcccctgctcagtggtcagctctggtcttcatc
ctactgacatcagaagaggagctggacgtgtttgacctgaagaaatattctgcttcagag
aagggtcttctgaggctgctgccagtagtcaaaacctccaaaacatctctgttaaatggc
tgtaagctgtcagcgagatgctgtgaagctctggcctcagttctcagctccaactcctct
agtctgagagagctggacctgagtaccaatgatctgcagaattcaggagtgaagctgctc
tctgctggactggggagtccacactgtacactggaaactctcaggttaaatggctgtaag
ctgtcagcgagatgctgtgaagctctggcctcagttctctgctccaactcctctagtctg
agagagctggacctgagtaccaatgatctgcaggattcaggagtggagctgctctctgct
ggactggggagtccacactgtacactggaaactctcaggttaaatggctgtaagctgtca
gagggatgctgtgaagctctggcctcagttctccgctccaactcctctagtctgagagag
ctggacctgagtaccaatgatctgcaggattcaggagtgaagctactctctgctggactg
gggagtccacactgtacactggaaactctcaggttaaatggctgtaagctgccagagaga
tgctgtgaagctctggcctcagttctcagctctaactcctctagtctgagagagctggac
ctgagtaccaatgatctgcaggattcaggagtgaagctgctctctgctggactggggagt
ccacactgtacactggaaactctcaggtcagttatcagcctcttcttcaaacaggttatt
ctagactccagtaagtgctgcttatgtccgatgcatttttattaa
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