KEGG   Gadus morhua (Atlantic cod): 115546238
Entry
115546238         CDS       T10832                                 
Symbol
aaas
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115546238 (aaas)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115546238 (aaas)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115546238 (aaas)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_CDC20-Fz WD40_Prp19 eIF2A Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 PD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 115546238
NCBI-ProteinID: XP_030215763
Ensembl: ENSGMOG00000009746
LinkDB
Position
1:complement(18302404..18310080)
AA seq 512 aa
MCSLAFFPPPLSPGKITLCETNNELVSTESCQKQDYGPLSLYFPRESLKPHSRTENSSKA
AFLQHSETLWIRSATSWREAGLTGLLEEIVNSSTEAPKWLSVSSGCVLALLQRVSSLHGA
LFPHLKLSSENMIAEFSQVLNWSDCAVRAFAWHPHTEKFAVALLDDSIKIYNPKSATPPT
LKHRLQRSVASVQWKPLCASALAVACQTCLLVWHVDPCSLSIRPSSGCAQVLSHPGHSPV
TSIAWSPSGSLLVSASPVDTSMMVWDVAAESSVPLQRVGGGGVSFLSWSPDGSHVLAATP
APLFRVWETRMWTCERWPSLKGRCESGCWSPDGSRLLFTIQGEAVIYSLTFSDTTGTMKG
SKAAAVVADLSETTFTTPAGDIIVGGEVQLLAWDPRGERLAVLLKGDSEAAARPAMIAVF
KTRNDPIFELLPCGFIQGEPGAEPRLMQFSPNFPHGAMLTVCWSNGRITHVPFYFLSAGV
PHLGLNGSPAMPQPEERLVDHGNSTLFTELCS
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtgctccttggcgttcttcccccctccgctgtcccctggaaagatcactctctgcgag
accaacaacgagctggtgtccacggagagctgtcaaaaacaggactatggtcccttgagt
ctttactttccccgggagtcgctgaagccacacagtcggacagagaacagcagcaaggcg
gccttcctgcagcactctgagacactgtggatcaggagcgccacgtcatggcgggaggca
gggctcaccgggcttctagaagaaatcgtcaactcaagcacagaggcacccaagtggctc
tctgtgagttcgggctgtgtcctggctctgctccagagggtctcgtccctccacggcgcc
ctgttcccccacctcaagttgagcagtgagaacatgattgcagagttctcccaggtgctg
aactggtcagactgtgcagtgcgcgcctttgcctggcatcctcatacagaaaagtttgct
gtggctctattggacgattcaatcaagatctacaatcccaagagtgccacgccccccacc
ctgaagcaccggctgcagaggagcgtggcgagcgtgcagtggaagccgctgtgtgcgtcc
gcgctggcggtggcctgtcagacctgcctgctggtctggcacgtggacccctgctcgctg
tccatcaggccgtcctctggctgtgcccaggtcctgtctcacccgggccactccccggtc
acctccatcgcctggtctcccagcggctccctcctggtgtcagcctcccccgtggacaca
tccatgatggtgtgggacgtcgcggcggagagcagcgtgcccctccagcgtgtgggcggg
gggggggtgtccttcctgtcctggtcgcccgacggcagccacgtcctggcggccacgccc
gctcctctcttcagggtctgggagaccaggatgtggacgtgtgagcgctggccctctctc
aagggccgctgtgagtccggctgctggagccctgacgggagccgcctgctcttcaccatc
cagggggaggcggtcatctactccctgaccttcagcgacacaacgggaactatgaaggga
tcgaaggcagcagcggtcgtggccgacctatcagagacgaccttcacaacgcccgcgggt
gacatcattgttggcggtgaggtccagctgctggcctgggaccccagaggggagaggctc
gcagtactgctcaaaggggattctgaagcagcagcccggcctgctatgatagcggtgttc
aagaccagaaatgatcctatttttgagctcctgccatgcggtttcatccagggagagccg
ggggccgagcccagactgatgcagttcagcccaaacttccctcacggagccatgctcacc
gtgtgttggtccaacggtaggatcacccacgtgcctttctatttcctgagtgccggcgtt
ccccacctgggtcttaatgggagtcccgcgatgccacagcctgaggaacggctcgttgac
cacggcaacagcaccctgttcacagagctctgctcctga

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