Gadus morhua (Atlantic cod): 115546238
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Entry
115546238 CDS
T10832
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115546238 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115546238 (aaas)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115546238 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_Prp19
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
PD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115546238
NCBI-ProteinID:
XP_030215763
Ensembl:
ENSGMOG00000009746
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All DBs
Position
1:complement(18302404..18310080)
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AA seq
512 aa
AA seq
DB search
MCSLAFFPPPLSPGKITLCETNNELVSTESCQKQDYGPLSLYFPRESLKPHSRTENSSKA
AFLQHSETLWIRSATSWREAGLTGLLEEIVNSSTEAPKWLSVSSGCVLALLQRVSSLHGA
LFPHLKLSSENMIAEFSQVLNWSDCAVRAFAWHPHTEKFAVALLDDSIKIYNPKSATPPT
LKHRLQRSVASVQWKPLCASALAVACQTCLLVWHVDPCSLSIRPSSGCAQVLSHPGHSPV
TSIAWSPSGSLLVSASPVDTSMMVWDVAAESSVPLQRVGGGGVSFLSWSPDGSHVLAATP
APLFRVWETRMWTCERWPSLKGRCESGCWSPDGSRLLFTIQGEAVIYSLTFSDTTGTMKG
SKAAAVVADLSETTFTTPAGDIIVGGEVQLLAWDPRGERLAVLLKGDSEAAARPAMIAVF
KTRNDPIFELLPCGFIQGEPGAEPRLMQFSPNFPHGAMLTVCWSNGRITHVPFYFLSAGV
PHLGLNGSPAMPQPEERLVDHGNSTLFTELCS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccttggcgttcttcccccctccgctgtcccctggaaagatcactctctgcgag
accaacaacgagctggtgtccacggagagctgtcaaaaacaggactatggtcccttgagt
ctttactttccccgggagtcgctgaagccacacagtcggacagagaacagcagcaaggcg
gccttcctgcagcactctgagacactgtggatcaggagcgccacgtcatggcgggaggca
gggctcaccgggcttctagaagaaatcgtcaactcaagcacagaggcacccaagtggctc
tctgtgagttcgggctgtgtcctggctctgctccagagggtctcgtccctccacggcgcc
ctgttcccccacctcaagttgagcagtgagaacatgattgcagagttctcccaggtgctg
aactggtcagactgtgcagtgcgcgcctttgcctggcatcctcatacagaaaagtttgct
gtggctctattggacgattcaatcaagatctacaatcccaagagtgccacgccccccacc
ctgaagcaccggctgcagaggagcgtggcgagcgtgcagtggaagccgctgtgtgcgtcc
gcgctggcggtggcctgtcagacctgcctgctggtctggcacgtggacccctgctcgctg
tccatcaggccgtcctctggctgtgcccaggtcctgtctcacccgggccactccccggtc
acctccatcgcctggtctcccagcggctccctcctggtgtcagcctcccccgtggacaca
tccatgatggtgtgggacgtcgcggcggagagcagcgtgcccctccagcgtgtgggcggg
gggggggtgtccttcctgtcctggtcgcccgacggcagccacgtcctggcggccacgccc
gctcctctcttcagggtctgggagaccaggatgtggacgtgtgagcgctggccctctctc
aagggccgctgtgagtccggctgctggagccctgacgggagccgcctgctcttcaccatc
cagggggaggcggtcatctactccctgaccttcagcgacacaacgggaactatgaaggga
tcgaaggcagcagcggtcgtggccgacctatcagagacgaccttcacaacgcccgcgggt
gacatcattgttggcggtgaggtccagctgctggcctgggaccccagaggggagaggctc
gcagtactgctcaaaggggattctgaagcagcagcccggcctgctatgatagcggtgttc
aagaccagaaatgatcctatttttgagctcctgccatgcggtttcatccagggagagccg
ggggccgagcccagactgatgcagttcagcccaaacttccctcacggagccatgctcacc
gtgtgttggtccaacggtaggatcacccacgtgcctttctatttcctgagtgccggcgtt
ccccacctgggtcttaatgggagtcccgcgatgccacagcctgaggaacggctcgttgac
cacggcaacagcaccctgttcacagagctctgctcctga
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