Gadus morhua (Atlantic cod): 115546563
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Entry
115546563 CDS
T10832
Name
(RefSeq) vacuole membrane protein 1-like isoform X1
KO
K21248
vacuole membrane protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115546563
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Gene cluster
GFIT
Motif
Pfam:
VTT_dom
Motif
Other DBs
NCBI-GeneID:
115546563
NCBI-ProteinID:
XP_030216008
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Position
7:18588909..18653721
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AA seq
602 aa
AA seq
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MCLSVFVCIHVCACICVCVFVCVVQVFVCRVRVCSFVCACVCVRAFVCVCVRVCVCVCMY
MCVLAGTDAGISPDEPGWRQSRMEEPERLVLWRKPLLTLHYFSLELLHSLSDFTLSLWKR
RRYVCGVLLLLLLLFIAYHVEGSHQQSVRRVEKTVLCCAYWLGLGILSSVGLGTGLHTFL
LYLGPHIASVTLAAYECGSVDFPEPPYPESILCPLEGGGSATGGPAHGEGPALGPGVSLW
TIMSKVRLEACMWGAGTAIGELPPYFMARAARLSGANPNDQDYQEFEEMMEQGANAQDFA
SRAKMAVHKLIQQVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATIIGKAVIKM
HIQKLFVIVTFSRHIVEQMVTLIGVVPVLGAALQRPFRDYLEAQRTRLRSQHAGDGIPTV
STTGAPFGDPPPTAPPSSTASCPSVFFLFLFLSLSLSLSLSPSLSLSLSLSLSLSLYSFS
YMRGERGKECGPPLLSPLSPPLCLSSSFFFPPPSPFICVLPFTLTHFARSLSLSLSLSLS
LSLSLSLSLSLSLSLSLSLSRSLSRSLPSLFHLPSLPVPLALLNYSSASPSFTACFLTSV
YL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgtctgtgtttgtttgtatacatgtgtgtgcgtgcatttgtgtgtgtgtgttt
gtctgtgtcgtgcaagtctttgtgtgtcgtgtgcgcgtgtgttcgtttgtctgtgcatgt
gtgtgtgtgcgtgcgtttgtctgtgtgtgcgtgcgtgtgtgtgtgtgcgtatgtatgtac
atgtgtgtgcttgcgggtacagacgcggggatctctccggacgagcctggatggaggcag
agtcggatggaggagccggagcgcctggttctgtggaggaagcctctcctgacactgcac
tacttctctctggagctgctgcactctctgagtgacttcactctgagcctctggaagcga
agacgctatgtgtgtggcgttctactgctgctcctcctgctcttcatcgcctaccatgtg
gagggctcccaccaacagtccgtgcgtcgcgtcgagaagacggtcctatgctgcgcgtac
tggctcgggctggggatcctgtcctccgtcggcctgggcaccggcctacacaccttcctg
ctctacctgggaccacacatagcctcggtgaccttagcagcgtatgagtgcggttcggtg
gatttccctgagcccccctacccagagagcatcctgtgtcccctggaggggggggggtcc
gccaccgggggccctgcccacggcgagggccccgcgctgggcccgggcgtctctctctgg
accatcatgtccaaggtccgcctggaggcctgcatgtggggggctggtacggccatagga
gagctgcctccctacttcatggcgcgcgcagcccggctgtccggcgcaaaccccaacgac
caagactatcaggagtttgaggagatgatggagcagggcgctaacgcacaggactttgcc
agcagagccaagatggccgttcacaagctgatccagcaggttggattcctggggattctt
gcttgtgcttctataccaaatcctttgtttgacctggctggaataacctgtggccatttt
cttgtccctttctggactttttttggagccactatcattggaaaagctgtgatcaaaatg
cacatccagaaactgtttgtgatcgtcaccttcagcaggcacatagtggaacagatggtc
actctcatcggtgtggtgccagtgctgggcgcggcactgcagaggcccttcagggactac
ttggaggcccagaggacccggctgcgcagccagcacgcgggagatgggatcccaacggtg
agtaccacaggggcccccttcggagaccccccacctacagcaccaccctcctccaccgcc
tcctgtccctctgttttttttctttttctttttctctctctctctctctctctctctctc
tctccctctctctctctctctctctctctctctctctctctctctctctattcattcagt
tacatgaggggcgagagagggaaagaatgcgggccccctttgctttcgcctctttctccc
cctctctgtctctcttcctccttctttttcccccctccttccccttttatctgtgttttg
cctttcactctgacccactttgcgcgctctctctctctctctctctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct
cgttccctctctcgctctctcccgtctctcttccacctcccctctctacctgtgccactt
gctctcttaaattattcatcggcctctccctcgttcactgcgtgttttttaacctcagtg
tatttatga
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