Gadus morhua (Atlantic cod): 115546741
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Entry
115546741 CDS
T10832
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
115546741 (nfrkb)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115546741
NCBI-ProteinID:
XP_030216324
Ensembl:
ENSGMOG00000019315
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Position
7:complement(13538347..13552839)
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AA seq
1288 aa
AA seq
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MDDLAHILTDPLGTREESNGQITEECMLGNCRVSLPEDLLEDPDVFFSVMSESTWTDVLS
DSQRHHLRQFLPQFPGNNVAVQDSAVSNLFNNQSFNFGNPLHLAQRLFRDGYFNPEVVKY
RQLCAKSQRKRRLYSLQQYYHRLLKQILVSRKDLLELAVHSGLDVPQKRPLNPRGQLEPQ
EPRIRRRVGRILREVKAECGDSNASSDDDGESWPPAPQSPSSPTTSLPLRVLPSLSTQDM
KTAEKPELGVQDLKSMLQNHREKRKRHPDHPDLVTSDIHLGNMLSRVNIGRKGSSVALFD
LALPKKKIKEERRKKRLRTTVKLEAEDPCEALMTSDAAALSANHVPSLPDTPTPPPLANV
KEEVIEECQSSPAVVEEISISFFNLLESIMKTENLSSTSLLEEKVQTWQLSPATSLNPWF
SFASCWSELVLPALQFLAGEAKDGMMTLPTGFSPYVEFGDQSQQWRWIGPSLDAEKDLSA
LCQLWIDSKDLVVKMEHEDLSEITSPVPRVSWTDYVVRPSTGDERHVFQIQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RSQEEFERIHQAQAAAAKARKALQQKPKPAPKPKSGSKEPGGKIQGSLEGGLESSPMSPI
PATPSTPGTPKSPLPSTVGTPTKTGLPDMVKSSPGVLLVAPPSMPQLGSLLPSSQAASAA
AQQPPSSSSLSASHQHAARLVSHLGTGALPQVRMVSAQPAVGGPQAALLHQTAHQIRVPV
SLGTKGLSQTVVSLPLRSQAGSSPMGVPTTLSVSALAVAKPRPGSPGSPAKTLVTPALLQ
GMAGQSIKQVSITGQLGVKTSVGGGGIPITATNLRIQGKDVLRLPPSSITTDSKGQTVLR
ITPDMMATLAKSPVATVKLSPDFLGSAGHGGGKSISATLHVTPPHSSSSSSSSTLSSLVT
EAGKAGLKAGHASSSLLKAGAADTAIRLMPTLAVTVGDQKTRTFSTHVSSASGDSKGAAT
IRIMPGLGVIPHKQGQTITMTTMAGSKPLTVSAGPGTVTMAAAGALGAKGITVSASPLTI
GTATGTVRHVPVTATVVTTQAGKLPTRITVPLSVLNQPLKTKSVVTSPMVKGSLNTSLSS
LGRNIILTTMPAGTKLMAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVQTQQIQQHVATG
SPKSVSTVVVTTAPSLKCPPDPSAAPQP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttgcacacatactgacagacccacttggtacaagggaagaaagtaacggg
caaatcacagaggagtgtatgcttggaaactgtcgggtgagcctacccgaggatctgctt
gaggaccctgacgtattcttctccgtgatgagtgagagcacatggactgacgtgctgtca
gactcccagaggcaccacctgcgtcagtttctgccgcagttcccagggaataacgtcgct
gtgcaggacagtgccgtcagtaatcttttcaacaaccaaagctttaactttggaaatccc
cttcatctcgctcagagattattcagagatggctactttaatcctgaggtggtgaagtac
aggcagctgtgtgctaagtctcagagaaagaggcgtctgtactctctacagcagtactac
cacagactactgaagcagatccttgtttccaggaaggatctcctggagctagccgtgcac
agcgggctggacgtgccacagaagcggcccctgaaccccaggggccagctggagccgcag
gagcccaggatccgaaggagggtgggccgcatcctgagggaggtgaaggccgagtgcggg
gacagcaacgcctcctctgacgacgacggagagtcatggcctccagcgccgcagtcgccc
tcctctcccaccaccagcctccccctccgcgtcctgcccagcctctccacccaggacatg
aagaccgccgaaaaacccgagctaggcgtgcaggatttgaagagcatgctccagaaccac
agagagaagaggaagaggcatccggaccaccctgacctcgtcacctctgacatccacttg
gggaacatgctctccagggtcaacataggtcggaagggctcctctgtggctctgtttgac
ctcgctttgcccaagaagaagatcaaagaggagaggaggaagaagaggttgaggacgaca
gtgaagctggaggctgaggacccgtgtgaggccctcatgacttccgatgccgcggctcta
tcggccaatcacgtcccctctctccctgacacgcccaccccaccgccactggccaacgtc
aaggaggaggtcattgaggagtgccagagcagcccagcggtggtggaggagatctccatc
agcttcttcaacctgctggagtctatcatgaagacagagaatctatccagtacctctctg
ctcgaggagaaggttcaaacatggcagttgtctcccgccacctccctcaacccctggttt
tcctttgcttcctgttggtcggagttagtacttcctgccctgcagttcctcgctggagaa
gccaaagatggcatgatgacgctgcccaccggcttctctccctacgtggagttcggggat
cagtcccagcagtggaggtggatcgggcccagtctagatgcagagaaggacctcagtgcg
ttgtgtcagctgtggatcgattccaaggacctggtggtcaagatggagcatgaagaccta
tcggagataacctcccccgtgcctagggtcagctggacggactacgtggtgcgccccagc
acgggagatgagagacacgtcttccagatccaggaacaacagcgctacgaccagccacac
aaggccttcaccttccggatgcatggcttcgagtctgtggtggggcccgtcaaaggggtc
ttcgacaaggagatgtccctgaacaaggcccgggagcacaccctgctacgatccgaccgg
cctgcctacgtcaccatcctgtccctggtgcgagacgcagcggccaggcttcctaacgga
gaggggacccgggcggagatctgtgagctcctgaaggactcccagttcctagcccctgat
gtcaccagcgcccaggtgaacacggtggtgagtggggcgctggaccggctgcactacgag
aaagacccgtgtgtgaagtacgacatcggacgcaagctgtggatctacctgcaccgcgac
cgcagccaggaggagtttgagcgtattcaccaggcccaagccgccgcagccaaagccagg
aaagctcttcagcagaaacccaaacccgcccctaaaccgaagtctgggagcaaagagcct
ggcggtaagatccaaggctccctggagggcggcctggagtccagtcccatgtcccccatc
cccgccaccccgagcacccccggcacccccaaatctcccctgccctccacagtgggcacc
cccaccaagacggggctcccggacatggtgaagagcagcccaggggtgctgcttgtggcc
cctccctccatgccccagctgggctccctgctgcccagcagccaggctgcctccgcggcc
gcccagcagcccccctcctcctcctccctctccgcctcccaccagcacgccgcccggctg
gtcagccacctggggaccggggccctgccccaggtccgcatggtgtcggcccagcccgcc
gtcgggggcccgcaggccgccctgctgcaccagaccgcccaccagatcagggtgcccgtc
tccctgggaaccaagggcctctcacagacggtggtgtccctgccgctacggagccaagcg
ggcagcagccccatgggggttcccaccacgctgtcggtgtcggccctggctgtggccaag
ccccggcccgggtcccccgggagcccagccaagaccctggtcacccccgccctcctgcag
ggcatggccggccagagcatcaaacaggtgtccatcacgggccagctgggcgtgaagacg
tccgtgggcggcggcgggatccccatcacggccaccaacctgcggatccagggcaaggac
gtgctgcggctgccgccctcctccatcaccaccgactccaagggccagacggtgctgcgc
atcacgcccgacatgatggccaccctggccaagtcgcccgtggccaccgtcaagctctcc
ccggacttcctgggctcggccggccacggcggggggaagagcatctcggccacgctgcac
gtgaccccgccccactcctcctcctcctcctcctcctccacactctccagcctggtgacg
gaggccgggaaagctggtctcaaggcgggccacgcctcctcctcgctgctgaaggcgggc
gcggccgacacggccatccgcctgatgcccacgctggccgtcaccgtgggcgaccagaag
accaggaccttctccacgcacgtgtcgtcggcgtccggggactcgaagggcgccgccacc
atccgcatcatgcccggcctgggggtcatcccgcacaagcagggccagaccatcaccatg
acgaccatggccggcagcaagccgctgacggtgtcggccggccccgggacggtgaccatg
gcggcggccggtgccctcggcgccaaggggatcacggtgtccgcctcgccgctcaccatc
ggcacggcgaccggcaccgtgcgccacgtgcccgtcacggccacggtggtgaccacgcag
gcgggtaagctgcccaccaggatcacggtgcctctgtccgtcctcaaccagccgctgaag
accaagagtgtggtgacctcgcccatggtgaaggggagcctcaacaccagcctcagcagc
cttgggaggaacatcatcctgaccaccatgccggcaggcaccaagctcatggccgggaac
aagccggtcagcttcgtcaccgcccagcagctgcagcagctgcagcagcagggtcaagcc
acacaggtccggatccagaccgttcagacccagcagatccagcagcacgtggcgacgggt
tctcctaaatctgtgtccaccgtggtggtcaccaccgcaccctcgctgaaatgtccgccg
gacccctcggccgcccctcaaccatga
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