Gadus morhua (Atlantic cod): 115546937
Help
Entry
115546937 CDS
T10832
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115546937
Pattern recognition receptors [BR:
gmh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115546937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_NXF1-5
ThsB_TIR
LRR_6
Motif
Other DBs
NCBI-GeneID:
115546937
NCBI-ProteinID:
XP_030216637
Ensembl:
ENSGMOG00000030395
LinkDB
All DBs
Position
7:complement(29285720..29293462)
Genome browser
AA seq
954 aa
AA seq
DB search
MKTKIAMSLRGICFCSFGILHFFLNSFIFPTAGYVVKDCKITQNTQAICKNSLKVFPKEI
PETVTIIDLSGNNISKLNKKALENLPNLLHLNLGHNLISKIESGTFVVQISLKMMFLDNN
MLCKLQDGMFDGLVNLIELHLTSNQIQTVAPASFISLTKLRFLDLGHNKLRHLTNILQHT
PLLQYLFIPANNISTFHSWELSNKSTELIILDLSQNDVMFFRLTAGIFPNLRRLDLDDSI
KNGIVWEVNDTSYLRNVVKLDIGGVRSSLHGLQEVLETCNSSLKYLKLHHINNNLQVLIN
ISCKIPTLISFKIQNNGIKVITVDMLHLCTNLKELDLGMNEITDISNNSFQSLRKIKTLI
MKSNCLTSVPYAVRKTQILKLDLSYNNINVLGCDDFAAMKLLRILRLDNNPLLTLKDCVF
KDLVQLRVLMLQNSSIDQLNGTFKKNTPNLEDLSLSNNQITVLDHGEFKALNSLKNLALE
GNKLKLLNNGTFFGLSSLRQLTLRSNEILEITNGAFSHLEALKTLNLESNHIKYASVKPI
PYPPFAGLSQLDTLFISDQHRSHRSNFPQNLLQGLTNLSILYIQRNQLKTLHPHTFNYTP
NLNRLHLSQNAFTDIPNNLFSPIQKLKRLHISQTNLRSLDFLLHANLTELELLQVGKNAF
SVITEPVMLSLSALEYLDLQGNSFSCNCDNAWFLQWVINNKQTQVFDAYNFECNFPPNLK
GRKLLEIDVRSCTVDMGFICYISTTCAVIMTIAVSFTHKFLQWHLVYAYYLMLAFLYNSK
NKDKGAHQYDAFVSYNTNDEGWVLGELLPKLEDEQGWRLCLHHRDFQPGKPIMENITDAI
YGSRKTICVVSRDYLESEWCSREIQVASFRLFDEQKDVLILVFLEDIPMQQLSPYYRMRR
LLKRQTYLSWSRADAHPDLFWEMLRQALETREHPMGEHIRLTVVNGPPGERPDH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaaatcgcgatgtcgttaaggggaatttgtttttgttcatttggaatatta
catttctttttgaacagttttatttttccaactgctggttacgtggtgaaggactgcaag
atcacgcagaacacacaggccatatgtaagaacagtttaaaagtatttccaaaggaaatt
ccagaaacagtcacaattatagacctgtctggaaacaacatttctaaattaaataaaaaa
gctttggaaaatttaccaaatctgttgcacttaaatctgggacacaacttgatctccaag
attgaatctggcacttttgtggttcaaatctctctaaagatgatgtttttagacaacaat
atgctttgtaagctacaggatggtatgtttgatggcttggtcaatctcatagaattgcat
ctgacttccaatcagatccaaacagtagcaccggcctctttcatatctctgaccaagctt
aggtttttggacctaggccacaacaaactgcgccacttaacaaatatattacaacatacg
ccacttttacaatacctgttcattccagcaaacaacatttccacttttcattcatgggag
ctgtcaaataagtctacagaacttattatacttgatttgtcccagaatgatgttatgttc
tttaggctcactgcaggtatctttcccaacctcagaaggttggaccttgatgatagtata
aagaatggtatcgtctgggaggtgaatgacacatcgtaccttagaaatgtggttaaacta
gatatcggtggggttcgctcctcattacatggactgcaggaagtgctagagacatgtaac
tcctcactgaagtatctgaagttacaccatatcaataacaacctgcaggttctcatcaat
atttcctgcaaaattccaacccttatctcttttaaaatccaaaataacggcatcaaagtt
attacagtggacatgctgcacttgtgtactaatctaaaagaattggacttggggatgaat
gagataactgacatctctaacaattcgttccaatcacttaggaagattaagactttaatc
atgaagtctaactgtctcacatcggtcccctatgccgtaaggaaaactcaaatcttaaaa
ctggatctcagctacaataacatcaatgttcttggctgtgatgattttgccgctatgaaa
cttctcagaattctccgtctagacaataatcctctcctgactctcaaggattgtgttttc
aaagatttggtccaattaagggtcttaatgttgcaaaacagcagcattgatcaattaaac
ggcaccttcaaaaaaaacacaccgaatcttgaagatctttctttgtcaaacaatcaaata
actgttctagatcatggagaatttaaagccctgaattccctcaaaaatttggcattagaa
ggaaataaattaaaactacttaataatgggactttttttggactgtccagtcttaggcaa
cttactctccgatcaaatgaaatacttgaaattacaaacggtgctttcagtcacttggaa
gctttaaagacattgaatttggagagcaatcacatcaaatatgcatcggtaaagcccatt
ccttatccaccatttgctggactttcacaactagacacattgtttatttcagatcaacac
agatctcataggtccaacttccctcaaaaccttctgcaaggcctgacaaatctgtcaata
ctctatatacaacgtaaccagcttaaaaccttgcatccacacacctttaactatactcct
aatttgaataggctccatttgtctcaaaatgctttcacagacattcccaacaatttgttt
tccccgattcaaaaactaaaaaggcttcacatttcacaaacaaacctaaggtctctagat
tttctgctccatgctaacctcacagagctggagttattgcaggtggggaagaatgcattt
tctgtgattacagagccagtgatgctgtctctgtcagcccttgaatacctggatttgcag
ggtaatagcttctcctgtaactgtgacaacgcgtggttcctccaatgggtaatcaacaac
aagcaaacacaagtgtttgatgcttacaactttgaatgcaacttcccaccaaacctcaaa
gggagaaaacttttggagattgacgtccgttcatgtacggtcgacatggggttcatctgt
tatatttcaacgacatgcgcggtcatcatgaccatagcagtctccttcacccacaagttc
ctgcaatggcatctggtctacgcgtactacctcatgctggcgttcctctacaactcaaag
aacaaggacaagggtgctcatcagtacgacgccttcgtctcctacaacacaaacgacgag
ggctgggtgctgggggagctgctgcccaagctggaggacgagcagggctggagactgtgt
ctgcaccaccgagacttccagccaggtaaacccattatggaaaacataacagacgccatc
tatggcagccggaaaaccatctgcgtggtcagtcgtgattacctggagagtgaatggtgc
tccagagagatccaggttgccagcttccgtctgtttgacgagcagaaggacgtgctgatc
ctggtgttcctggaggacattcccatgcagcagctttctccgtactaccgcatgcggagg
ctcctgaagagacaaacctacctgagctggtcccgcgcagacgcacacccagacctgttc
tgggagatgctccggcaggccctggagacccgagagcacccaatgggtgagcatatacgg
ctcaccgtggtgaacggaccccctggagagagaccagaccattaa
DBGET
integrated database retrieval system