KEGG   Gadus morhua (Atlantic cod): 115547025
Entry
115547025         CDS       T10832                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04145  Phagosome
gmh04210  Apoptosis
gmh04530  Tight junction
gmh04540  Gap junction
gmh04814  Motor proteins
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115547025
  09143 Cell growth and death
   04210 Apoptosis
    115547025
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115547025
   04540 Gap junction
    115547025
  09142 Cell motility
   04814 Motor proteins
    115547025
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115547025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115547025
   03036 Chromosome and associated proteins [BR:gmh03036]
    115547025
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmh04812]
    115547025
   04147 Exosome [BR:gmh04147]
    115547025
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115547025
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115547025
Cytoskeleton proteins [BR:gmh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115547025
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115547025
  Exosomal proteins of other body fluids (saliva and urine)
   115547025
  Exosomal proteins of colorectal cancer cells
   115547025
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 115547025
NCBI-ProteinID: XP_030216794
Ensembl: ENSGMOG00000034394
LinkDB
Position
7:complement(7805873..7829212)
AA seq 449 aa
MRECISMHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVNEEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtatctccatgcacgtcggccaggccggtacccagatgggcaatgcctgc
tgggagctgtactgcctggagcacggcatccagcccgacggacagatgccctccgacaag
accatcggcgggggagacgactccttcaacaccttcttcagcgagacgggggcggggaag
cacgtcccccgggcggtgttcgtggacctggagcccaccgtcatcgacgaggttcgtacc
ggaacctaccgccagctgttccaccctgagcagctgatcacagggaaggaagacgcggcc
aataactacgcccgcggtcactacaccatcggcaaggagatcatcgacctcgtgctggac
agaactcgcaagctggcggaccagtgcacaggtctccagggcttcctcatcttccattcc
ttcggtggaggaacgggctccggcttcacctctctgctgatggagcgtctctccgttgac
tacgggaagaagtccaagctggagttcgccgtctaccccgcgccccaggtgtccaccgcc
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactcggactgc
gccttcatggtagacaatgaggccatctacgacatctgccgcaggaacctggacatcgag
cgccctacctacaccaacctcaacaggcttatcggtcagatcgtctcctcaatcaccgcc
tccctgcgcttcgacggtgccttgaacgtcgacctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctacgcccccgtcatctccgccgagaag
gcctaccacgagcagctgtcggtggccgacatcacaaacgcctgcttcgagccggccaac
cagatggtgaagtgcgaccctcgccacggcaagtacatggcgtgctgcctgctgtaccgc
ggagacgtggtgcccaaagacgtcaactccgccatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgccccaccggcttcaaggtgggaatcaactaccagcccccc
accgtggtgccgggaggagatctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgccgaggcctgggcgcgcctggaccacaagtttgacctgatgtacgct
aagagggcctttgtccactggtacgtcggggagggcatggaggagggagagttctccgag
gccagggaggacatggccgccctggagaaggattacgaagaggtgggcaccgacagcgtc
aacgaggaggacgagggtgaagagtactag

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