Gadus morhua (Atlantic cod): 115547186
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Entry
115547186 CDS
T10832
Name
(RefSeq) sodium/calcium exchanger 1-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04260
Cardiac muscle contraction
gmh04261
Adrenergic signaling in cardiomyocytes
gmh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115547186
04020 Calcium signaling pathway
115547186
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115547186
04261 Adrenergic signaling in cardiomyocytes
115547186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115547186
00536 Glycosaminoglycan binding proteins [BR:
gmh00536
]
115547186
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
115547186
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Heparan sulfate / Heparin
Others
115547186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
115547186
NCBI-ProteinID:
XP_030217043
Ensembl:
ENSGMOG00000006312
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All DBs
Position
7:complement(33601749..33631309)
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AA seq
958 aa
AA seq
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MFLHRRSPTPPQPRCSFSCLLLLLLLAGLSPTCSSSSSSSSSSSSSDAPPTPGPPANCSE
EESCSEGVVLPTWNPLNPSVGDKVARAIVYFAALIYMFLGMSIIADRFMSSIEVITSQER
EVTITKPNGETTTTTVRVWNETVSNLTLMALGSSAPEILLSVIEVVGHQFQGGSLGPSTI
VGSAAFNMFIIIALCVYVVPENEVRKIKHLRVFFVTATWSIFAYIWLYLILAVISPGEVE
VWEAVLTFLFFPLCVLQAWIADRRLFFYKYVNKRYRADKKRGIIIGTEGDGVFTKMDLEM
DGGRGANCYSDPKDVLDGMLEGVEEGGGGLDPGQDQEEEARREMARTLKELKQRHPEKDM
EQLIEMANYQVLVQQQKSRAFYRIQATRMMIGAGNILKKHAADQARKVVSCHEGSGQEED
PHTVYLQFEPSHYQCFENCGSLKLSVGRHGGDTGCTVKVDYRTEDGTANAGSDYEFAEGT
LVFKPGEAVKEFTVGVIDDDIFEEDEHFYVHLSNPRVAHRAEVATLEPGAITSGGGPTGG
GLASYVQPKAALGSAHSATVTIYDDDHAGIFTFESGAMRVSESVGSMQIKVHRTSGARGK
VAIPYHTMEGTAKAGDDYQEVAGKLEFQNDETMRLLDVKIIDDEEYEKNKTFIIVLEEPI
LLEVGQKHGDSNDNKPMVDLVDVAKMGCPSLGEHVRLEVVIEESYEFKNTVDKLIKKTNL
ALVVGSSSWREQFVSAVTVSAGDDDDEDSGEERLPSCFDYIMHFLTVFWKVLFAFVPPTE
YWGGWACFLVSISLIGVLTAVTGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVA
AIQDQYADASIGNVTGSNAVNVFLGIGVAWTIASVYWSSRGQKFLVNPGSLAFSVTLFTV
MAVCCVMVLLYRRRPGVAGGELGGPRTAKLLTLGLFLSCWFIYILLSSLEAYCHIPGF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgttcctccacagacgctccccgacaccaccccagcctcgctgctccttctcctgcctc
ctcctcctgctcctcctagcaggcctcagccccacctgctcctcctcttcctcctcctcc
tcctcctcctcctccagcgacgccccgcccacccccgggcccccggccaactgctccgag
gaggagagctgctccgagggggtggtcctgcccacctggaaccccctcaacccctcggtg
ggcgacaaggtggcgcgcgccatcgtctacttcgccgccctcatctacatgttcctgggg
atgtccatcatcgcagaccgcttcatgtcctccatcgaggtcatcacgtcgcaggagcgc
gaggtcaccatcaccaagcccaacggcgagaccaccaccaccaccgtgcgcgtctggaac
gagaccgtgtccaacctcacgctgatggcgctgggctcctcggcgccggagatcctgctg
tccgtcatcgaggtggtgggccaccagttccagggcggctccttgggtcccagcaccatc
gtgggcagcgccgccttcaacatgttcatcatcatcgcgctgtgcgtgtacgtggtgccc
gagaacgaggtgcgcaagatcaagcacctgcgggtgttcttcgtcacggccacctggagc
atcttcgcctacatctggctgtacctcatcctggccgtcatctcccccggggaggtggag
gtctgggaggccgtgctcaccttcctcttcttcccgctgtgcgtgctccaggcgtggatc
gccgaccgacgcctcttcttctacaagtacgtcaacaagcgttaccgtgccgacaagaag
cgcggcatcatcatcgggacggagggcgacggcgtgttcaccaagatggacctggagatg
gacggcggccgcggggccaactgctactccgaccccaaggacgtcctggacgggatgctg
gagggggtggaggagggcggaggaggcctggacccggggcaggaccaggaggaggaggcc
cggcgggagatggcccgcacgctgaaggagctgaagcagcggcacccagagaaggacatg
gagcagctgatcgagatggccaactaccaggtgctggtgcagcagcagaagagccgcgcc
ttctaccgcatccaggccacgcgcatgatgatcggggcgggcaacatcctgaagaagcac
gcggccgaccaggcccgcaaggtggtgagctgccacgagggcagcggccaggaggaggac
ccccacaccgtctacctgcagtttgagccgtcccactaccagtgcttcgagaactgcggc
tccctgaagctctccgtggggcgccacggcggcgacaccggctgcaccgtcaaggtggac
taccgcaccgaggacggcacggccaacgcgggctccgactacgagtttgcggagggcacg
ctggtgttcaagcccggcgaggcggtgaaggagttcaccgtgggcgtcatcgacgacgac
atcttcgaggaggacgagcacttctacgtgcacctcagcaacccccgcgtggcgcaccgc
gccgaggtggccaccctggagcccggcgccatcacctccggcggcggcccgacgggcggc
ggcctggcgtcctacgtccagcccaaggcggcgctgggctccgcccactccgccaccgtc
accatctacgatgacgaccacgccggcatcttcaccttcgagagcggcgccatgcgggtg
agcgagagcgtgggcagcatgcagatcaaggtccaccgcacgtcgggcgccaggggcaag
gtggccatcccgtaccacaccatggagggcacggccaaggccggggatgactaccaggag
gtggccggcaagctggagttccaaaacgacgagaccatgagactgctggacgtgaagatc
atcgatgatgaggagtacgagaagaacaagaccttcatcatcgtgctggaggagcccatc
ctgctggaggtcggccagaagcacggggactccaacgataacaagccgatggtggacttg
gtggacgtggccaagatgggctgccccagcctgggggagcacgtccgcctggaggtggtc
atcgaggagtcctacgagttcaagaacacggtggataagctgatcaagaagaccaacctg
gccctggtggtcggcagcagcagctggagggagcagttcgttagtgctgtcactgtgagc
gcaggtgacgatgacgatgaggacagcggcgaggagcgcctgccctcctgcttcgactac
atcatgcacttcctcaccgtgttctggaaggtcctgttcgccttcgtcccgcccaccgag
tactggggcggctgggcctgcttcctcgtgtccatctccctgatcggcgtgctgacggcc
gtcaccggggacctcgcctcgcacttcggctgcaccgtcggcctcaaggactccgtcacc
gccgtggtgttcgtggcgctcgggacctccgtcccagacaccttcgccagtaaggtggcg
gccatacaggaccagtacgccgacgcgtccatcggcaacgtgacgggctccaacgccgtc
aacgtgttcctgggcatcggcgtggcctggaccatcgcctccgtctactggagctcccgc
gggcagaagttcctggtgaaccccggctcgctggccttctccgtcacgctgttcacggtg
atggcggtgtgctgtgtgatggtgctgctgtaccgccgccggccgggcgtggcggggggc
gagctgggggggccgcggactgccaagctcctcaccctcggcctgttcctgtcctgctgg
ttcatctacatcctgctgtcctccctggaggcctactgccacatccccggcttctga
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