Gadus morhua (Atlantic cod): 115547209
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Entry
115547209 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04260
Cardiac muscle contraction
gmh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115547209
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115547209
04261 Adrenergic signaling in cardiomyocytes
115547209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115547209
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115547209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
Phage_holin_6_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115547209
NCBI-ProteinID:
XP_030217128
Ensembl:
ENSGMOG00000011163
LinkDB
All DBs
Position
1:complement(14055397..14186467)
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AA seq
1088 aa
AA seq
DB search
MQVDPRTVSPRARCARLFLVCLTLSSGVIGVGGSHQSIPPSVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFERAVRVEEINGLQLVKKLAEDMEEMFDKKAQAMKRLVDAAEEAHLQ
HEEDPDLQYEYFNAVLINEVDKENNSVELGGRFLLQSNDHFNNLPVNLSLSVVQVPTNMY
NKDSAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKNVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNE
ELHYVEKCLNGTLVQADVTNKDYFRLRLDKLFAKGIGMLDVALTEAFNLLTDFNQTGRGS
ECSQAIMLVTDGAVDTYDAVFAKYNWPDRKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIDQEHDTVWTEAYIDNTMEDGRDPVLMTTVAMPVFS
TKNETKNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPLYGD
GKKRGGRKPSYSSVDLSEVEWEDRDDALRNAMVNRKTGIFSMEVKKTVDKGKRVLVLHND
YYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVELADEWTYCNTDEYPE
HRYLSQIEAIKLYLSGHEPLLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGV
EIAYLGSRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVY
SLPFNSGSENRSVVLASTAIQLLDERRSPIAAAVGIQMKLDFFKKKFWTASRQCAALDGK
CSINCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMNKLLQMGSFKRVTLYDYQ
AVCLIYSERSDSAHTLLDPYFALLAVAKWILTELIVFLVEFNLYSWWHSDLTVKAQRSGR
PMYVPCDTEYPAFVSERTIKENTGNIDCDGCLKSFVVQQIPSSNLFMVVVDNKCDCSMVE
QITMDPVEIIYNESLKCERLKFQKDRRRPDTCHPFHPEENSMECGGAWGLTPSLAATLLC
LLLPLFPR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagacccaagaacagtatctcctcgtgcacggtgcgcacgcctgttcctagtt
tgccttactctgagcagcggggtcatcggggtcggaggatctcaccaaagcatcccgcca
tctgtggtgaagctgtgggcgtcagctttcggaggagagatgaagtccatttcagccaaa
tactctggttcccagctcctgcaaaagaaatacaaggagttcgagcgcgcggtgcgggtg
gaggagatcaacgggctgcagctggtgaagaagctggccgaagacatggaagagatgttt
gacaagaaagcccaggccatgaagaggctggtggatgcagcagaggaagcccacctccaa
cacgaagaggaccctgacctccagtacgagtacttcaacgcggtgctcatcaacgaggtg
gacaaggagaacaacagtgttgagctgggggggcgctttctgctgcagtccaacgaccac
ttcaacaacctgcccgtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtac
aacaaggactcagcaatagtcaacggagtgtattggtcggaggccttaaacaaagtgttt
gtggataactttgagaaggacccatcgctcatatggcagtactttggcagtgccaaaggc
ttcttcagacaatacccagggatcaaatggaagcccgacgagcacggggtgatcgcgttt
gactgtcgcaaccggaagtggtacatccaggcagccacctccccaaagaacgtggttatc
ctggtggacgtcagcggcagcatgaaggggctgaggctgaccatcgcccggcagaccgtc
tcatccatcctggacacgctgggcgacgacgacttcttcaacatcatcgcatataatgaa
gagctgcattacgtggagaaatgtctgaatggaactctggtccaagcagacgtcaccaac
aaggactacttccgattgcgtctggacaaactgttcgctaaaggcatcggcatgctggac
gtcgctctgaccgaagcctttaacctcctcactgatttcaaccagacggggcgaggcagt
gagtgcagccaggccatcatgctggtgacggacggggcggtggacacctacgacgccgtc
ttcgccaagtacaactggcctgaccgcaaggttcgcattttcccctacctgattggcaga
gagtccgccttcgctgataatctgaaatggatggcgtgtgcgaacaaagggtacttcacc
cagatctccaccctggcggacgtgcaggagaacgtgatggagtacctccacgtgctgagc
cgccccaaggtgatagaccaggaacacgacacggtgtggacagaggcctacatcgataac
actatggaggatggtcgggacccagtgctgatgaccaccgtggcgatgccagtcttcagt
accaagaacgaaacgaaaaaccgaggcattctgctgggagtggtaggaaccgatgtgcct
gtgtcagagcttctaaagaccatccccaaatataagttgggcatccacggctatgcgttt
gcaatcaccaacaacggctacatcctcacccacccagacctgcgacccctttacggtgac
ggtaagaagcgcggggggaggaagcccagctacagcagcgtggatctgtccgaggtggag
tgggaggaccgggacgacgcgctgaggaatgccatggtcaaccggaagacagggatattt
tccatggaggtgaagaagacagtcgacaaagggaaacgtgttcttgttctgcacaatgat
tactactacacagacattaaaggcacacctttcagcctaggggtagccctttcaagaggt
catggtaaattcttcttcagagggaatgtcacagttgaggaaggtcttcatgacttggag
caccctgatgtagagctggccgacgagtggacctactgtaacacagacgagtatcctgag
caccgctacctctcccagatagaagccatcaaactgtacctgagtggccatgagcctctg
ctgcaatgcgacaaggagctgattcaggaggtcctgtttgacgccgtggttaccgctccg
ttagaggcctactggactagcctggtgctcaacaagtcagagaactctgataagggtgtg
gagatagcctatcttggctcaaggactggtctctccaggatcaacctctttgtggtgcct
gacgaactcaccaaccaagacttcctgactgccgaggacaaggagggggtgttcaacgct
gaccacttccccctgtggtacaagagagctgcagagcaggttccgggaacctttgtctac
tctcttccgttcaactctggatcagagaacaggagtgtggtgttggccagcactgccatt
caactcttggatgagaggaggtcacccattgcagctgctgtgggcatccagatgaagctg
gacttctttaagaagaagttctggacggccagtagacagtgtgcagctctggacgggaag
tgttccatcaactgcgatgatgagaacatcaactgctacctgatcgacaacaacggcttt
gtgctggtggccgaggactacacactgacggggaagttctttggagaagctgagggagcc
gtaatgaataagctgctgcagatgggctccttcaagcgggtgaccctgtacgactaccag
gccgtctgcctgatctactcggagaggagcgacagcgctcacactctgttggacccgtac
ttcgccctcctggccgttgccaagtggatcctgaccgagctaattgtgtttctggtggag
ttcaacctgtacagctggtggcactctgatctcactgtcaaagcccagaggtcggggcgc
cccatgtatgtgccgtgtgacacagagtacccggccttcgtctccgagagaactatcaag
gagaacacgggcaacatcgactgtgacggctgcctcaagtcctttgtggtgcagcagatc
cccagcagcaacctcttcatggtggtggtggacaacaagtgtgactgcagcatggtggag
cagatcaccatggaccccgtggagatcatctataatgaatctctcaagtgcgagaggctc
aagttccagaaggacagaaggcgcccggatacctgtcacccgttccacccggaggagaac
tccatggagtgcgggggcgcctggggtctcaccccgtcgctcgcggcaacgctgctctgc
ctcctcctgcctctgttccctaggtga
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