Gadus morhua (Atlantic cod): 115547227
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Entry
115547227 CDS
T10832
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115547227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115547227
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115547227
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
CSD
Motif
Other DBs
NCBI-GeneID:
115547227
NCBI-ProteinID:
XP_030217148
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Position
7:complement(31969335..31990067)
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AA seq
386 aa
AA seq
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MEADGTQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKVFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAVAAAARGSGLPDYGFYSTPSDQRGGPCSFADYGSLGQAAQMLHTEH
ATSACNSPLQHIHSPDPFKSPGGNPSRPGGFPGANSPGPVADLYGPSSQESAVGNYISAA
SPQPGAGFGPSITGPLIATAFTNGYH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgggacccaagccacctctggaagcctaaacgactcacaacatgatccg
ggtaaaatgtttatcggaggactcagctggcagacttcaccagacagccttagagactat
ttcagtaaattcggggagatccgggaatgtatggtgatgcgggaccccacgaccaagcgc
tccagagggtttgggtttgtaacgtttacagacgcggccagcgtggataaagtcttggct
cagccgcaccacgaactggactccaagacgattgatccgaaggttgcctttcctcgccgt
gcccagcctaagatggtgacgagaacaaagaaggtctttgtggggggtctgtcagccaac
acggtggtggaggatgtgaagcagtactttgaacagtttgggaaggtggacgacgctatg
ctaatgtttgataaaaccacaaacagacatagaggattcggtttcataacgttcgagagc
gaagacatcgtggagaaagtgtgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccccctggcaccaggggccgggcc
cgggggctcccctacaccatggacgccttcatgctgggcatgggcatgctcagttaccct
aacatcgtggctacgtacgggcggggctacaccggattcgccccgagttacagctaccag
ttccctggcttcccggcgacggcgtatggaccggtggcggcggtggcggcggcggcgcgc
ggctcaggcctccccgattatggtttttactccacgcccagcgaccagaggggcggcccc
tgctcctttgcggactatgggtccctggggcaggcagctcagatgctacacactgagcat
gcgacctcggcctgcaactcccctctccaacacatccacagtccggacccctttaagagc
ccaggcggtaacccctcccgacccggtgggttcccgggggccaacagcccgggccccgta
gccgacctgtacggacccagcagccaggagtccgctgtggggaactacatcagcgccgcc
agcccccagcctggagccggcttcggccccagcatcactggcccgttgattgcgacagct
ttcacaaacggataccactga
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