KEGG   Gadus morhua (Atlantic cod): 115547277
Entry
115547277         CDS       T10832                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03030  DNA replication
gmh03410  Base excision repair
gmh03420  Nucleotide excision repair
gmh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115547277 (rfc3)
   03410 Base excision repair
    115547277 (rfc3)
   03420 Nucleotide excision repair
    115547277 (rfc3)
   03430 Mismatch repair
    115547277 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gmh03032]
    115547277 (rfc3)
   03036 Chromosome and associated proteins [BR:gmh03036]
    115547277 (rfc3)
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115547277 (rfc3)
DNA replication proteins [BR:gmh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115547277 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115547277 (rfc3)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115547277 (rfc3)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115547277 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115547277 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 nSTAND6 AAA_16 AAA_11 ABC_tran DUF2247
Other DBs
NCBI-GeneID: 115547277
NCBI-ProteinID: XP_030217239
Ensembl: ENSGMOG00000006025
UniProt: A0A8C4Z3E6
LinkDB
Position
7:29824338..29828329
AA seq 356 aa
MSLWVDKYRPASLGKLDYHKEQAVQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLKELY
GAGVDKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMGTCRLILCCNSTSKVIGPIRSRCL
GVRVPLPSTEEVCSVLSTVCKKEGLSLPSELARQISERSGRNLRKALLMCEACRVQQYPF
SVDQAVPETDWEVYLRETANAIVSQQSPARLMEVRARLYELLTHCIPPEIIMKGLVAELL
SNCDGQLKTEVTHIAAYYEHRLQLGNKAIYHLEAFTAKFMAIYKKFMEDGLDGLMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctttgggtggacaaataccgcccggcctccctggggaaactcgactaccataaa
gaacaagcagtgcagctgaagaacctggtgcaatgtggagatttcccccatctcctggtg
tacggaccgtcgggcgcaggaaagaagacccgcatcatgtgtctcctgaaggagctgtac
ggagccggggtggataagctgcgtatcgagcaccagaccatcgttgcgccctcgaagaag
aaaatagaaatcaacacgatagccagtaactaccacttggaggtcaacccgagtgatgcc
ggtaaccaggaccgtgtggtgatccaggagctgatcaagacggtggcccagtcccagcag
atccagtccagcacacagagggagttcaaagtggtgctgctgaccgaggtggaccgcctc
accaaggacgcccagcatgcattgcgtcgcaccatggagaagtacatgggcacctgccgc
ctcatcctgtgctgtaactccacctccaaggtgatcgggccaatcaggagccgatgcctg
ggcgtgcgagtgccgctgcccagcaccgaggaggtgtgcagcgtcctgtcgaccgtgtgt
aagaaggagggcctgtccctgccctcggagctcgcccggcagatcagcgagcgctcggga
cgcaacctccgcaaggcgctgctgatgtgcgaggcctgcagagtgcaacagtatcccttc
tcggtggaccaggcggtgccagagacggactgggaggtgtatctgagagagacggccaat
gccatcgtcagccagcagagcccggccaggttaatggaagtacgagccagactctatgag
ctcctgactcactgcatccctcctgagatcattatgaagggtctggtggccgagctgctg
agcaactgcgacgggcagctgaagacggaggtgacccacatcgcggcctactacgagcac
cggctgcagctgggcaacaaggccatctaccacctggaggccttcaccgccaagttcatg
gccatctacaagaagttcatggaggacggcctggacggactcatgttctag

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