Gadus morhua (Atlantic cod): 115547277
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Entry
115547277 CDS
T10832
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03030
DNA replication
gmh03410
Base excision repair
gmh03420
Nucleotide excision repair
gmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115547277 (rfc3)
03410 Base excision repair
115547277 (rfc3)
03420 Nucleotide excision repair
115547277 (rfc3)
03430 Mismatch repair
115547277 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115547277 (rfc3)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115547277 (rfc3)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115547277 (rfc3)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115547277 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
115547277 (rfc3)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115547277 (rfc3)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115547277 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
115547277 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
nSTAND6
AAA_16
AAA_11
ABC_tran
DUF2247
Motif
Other DBs
NCBI-GeneID:
115547277
NCBI-ProteinID:
XP_030217239
Ensembl:
ENSGMOG00000006025
UniProt:
A0A8C4Z3E6
LinkDB
All DBs
Position
7:29824338..29828329
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPASLGKLDYHKEQAVQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLKELY
GAGVDKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMGTCRLILCCNSTSKVIGPIRSRCL
GVRVPLPSTEEVCSVLSTVCKKEGLSLPSELARQISERSGRNLRKALLMCEACRVQQYPF
SVDQAVPETDWEVYLRETANAIVSQQSPARLMEVRARLYELLTHCIPPEIIMKGLVAELL
SNCDGQLKTEVTHIAAYYEHRLQLGNKAIYHLEAFTAKFMAIYKKFMEDGLDGLMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtggacaaataccgcccggcctccctggggaaactcgactaccataaa
gaacaagcagtgcagctgaagaacctggtgcaatgtggagatttcccccatctcctggtg
tacggaccgtcgggcgcaggaaagaagacccgcatcatgtgtctcctgaaggagctgtac
ggagccggggtggataagctgcgtatcgagcaccagaccatcgttgcgccctcgaagaag
aaaatagaaatcaacacgatagccagtaactaccacttggaggtcaacccgagtgatgcc
ggtaaccaggaccgtgtggtgatccaggagctgatcaagacggtggcccagtcccagcag
atccagtccagcacacagagggagttcaaagtggtgctgctgaccgaggtggaccgcctc
accaaggacgcccagcatgcattgcgtcgcaccatggagaagtacatgggcacctgccgc
ctcatcctgtgctgtaactccacctccaaggtgatcgggccaatcaggagccgatgcctg
ggcgtgcgagtgccgctgcccagcaccgaggaggtgtgcagcgtcctgtcgaccgtgtgt
aagaaggagggcctgtccctgccctcggagctcgcccggcagatcagcgagcgctcggga
cgcaacctccgcaaggcgctgctgatgtgcgaggcctgcagagtgcaacagtatcccttc
tcggtggaccaggcggtgccagagacggactgggaggtgtatctgagagagacggccaat
gccatcgtcagccagcagagcccggccaggttaatggaagtacgagccagactctatgag
ctcctgactcactgcatccctcctgagatcattatgaagggtctggtggccgagctgctg
agcaactgcgacgggcagctgaagacggaggtgacccacatcgcggcctactacgagcac
cggctgcagctgggcaacaaggccatctaccacctggaggccttcaccgccaagttcatg
gccatctacaagaagttcatggaggacggcctggacggactcatgttctag
DBGET
integrated database retrieval system