KEGG   Gadus morhua (Atlantic cod): 115547342
Entry
115547342         CDS       T10832                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115547342 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115547342 (exosc8)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115547342 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 115547342
NCBI-ProteinID: XP_030217373
Ensembl: ENSGMOG00000012314
UniProt: A0A8C4ZF41
LinkDB
Position
7:complement(29536894..29541200)
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELVEFRTTTLNIGSISTAEGSALVKIGNTTVIC
GIKMELANPSVEAPNKGYIVPNVDLPPLCSSGFRPGAPGEQAQAASQFMADIIESSEVVK
TEDLCIERGKLCWVLYCDLMCLDYDGNLLDTCTIALLAALKNAQLPEVTVNAETSLPEVD
LKKRKPLQIHRHPVASSFCVFDNSILIVDPTGEEERLSTAQLTVVTDEDGRLCSVHKPGG
TSLSGERLQECISRAQVRHREIRKLIDKVAQSVTSGK
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctgggttcaaaactgctgagcctctggaataccaccgaagttttctgaaagaa
aactgccggcctgatggaagggaactggtcgaattccgaaccacgacactgaacattgga
tccatttccacagcagaaggctctgccctggttaagattggaaacaccacagtcatctgt
ggaatcaaaatggagcttgccaacccgtcggtcgaggcccctaacaaaggttacattgtg
cccaacgtggacctgcctccgctgtgttcgtctggcttcaggcccggcgctccgggggag
caggcccaggctgccagccagttcatggctgacatcattgaaagctctgaggtggtgaag
accgaggacctgtgcatagagcgaggaaagctgtgctgggtgctgtactgtgaccttatg
tgtctcgactacgacggcaacctgttggacacttgcacaatcgccctactcgctgcgctc
aagaatgcacaacttccagaggtcacagtgaatgcagagaccagtctgccggaggtggat
ttaaagaagaggaagccgctgcagattcaccggcacccggtagcctcctccttctgcgtg
tttgacaactccattctgatcgtggaccccacgggcgaggaggagagactgtccacagct
caactcaccgtggtcacggacgaagacgggcgactctgctcggtccacaaaccaggtggg
acgtcgctctccggggaaaggctgcaggagtgcatcagccgagcgcaggtgcgccacaga
gagatccggaagctcatcgataaggtcgcccaaagcgtcacgtcgggaaaataa

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