Gadus morhua (Atlantic cod): 115547342
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Entry
115547342 CDS
T10832
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115547342 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115547342 (exosc8)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115547342 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115547342
NCBI-ProteinID:
XP_030217373
Ensembl:
ENSGMOG00000012314
UniProt:
A0A8C4ZF41
LinkDB
All DBs
Position
7:complement(29536894..29541200)
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AA seq
277 aa
AA seq
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MAAGFKTAEPLEYHRSFLKENCRPDGRELVEFRTTTLNIGSISTAEGSALVKIGNTTVIC
GIKMELANPSVEAPNKGYIVPNVDLPPLCSSGFRPGAPGEQAQAASQFMADIIESSEVVK
TEDLCIERGKLCWVLYCDLMCLDYDGNLLDTCTIALLAALKNAQLPEVTVNAETSLPEVD
LKKRKPLQIHRHPVASSFCVFDNSILIVDPTGEEERLSTAQLTVVTDEDGRLCSVHKPGG
TSLSGERLQECISRAQVRHREIRKLIDKVAQSVTSGK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaactgctgagcctctggaataccaccgaagttttctgaaagaa
aactgccggcctgatggaagggaactggtcgaattccgaaccacgacactgaacattgga
tccatttccacagcagaaggctctgccctggttaagattggaaacaccacagtcatctgt
ggaatcaaaatggagcttgccaacccgtcggtcgaggcccctaacaaaggttacattgtg
cccaacgtggacctgcctccgctgtgttcgtctggcttcaggcccggcgctccgggggag
caggcccaggctgccagccagttcatggctgacatcattgaaagctctgaggtggtgaag
accgaggacctgtgcatagagcgaggaaagctgtgctgggtgctgtactgtgaccttatg
tgtctcgactacgacggcaacctgttggacacttgcacaatcgccctactcgctgcgctc
aagaatgcacaacttccagaggtcacagtgaatgcagagaccagtctgccggaggtggat
ttaaagaagaggaagccgctgcagattcaccggcacccggtagcctcctccttctgcgtg
tttgacaactccattctgatcgtggaccccacgggcgaggaggagagactgtccacagct
caactcaccgtggtcacggacgaagacgggcgactctgctcggtccacaaaccaggtggg
acgtcgctctccggggaaaggctgcaggagtgcatcagccgagcgcaggtgcgccacaga
gagatccggaagctcatcgataaggtcgcccaaagcgtcacgtcgggaaaataa
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