Gadus morhua (Atlantic cod): 115547349
Help
Entry
115547349 CDS
T10832
Symbol
gtf2ird1
Name
(RefSeq) general transcription factor II-I repeat domain-containing protein 1 isoform X1
KO
K27274
general transcription factor II-I repeat domain-containing protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115547349 (gtf2ird1)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115547349 (gtf2ird1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
115547349
NCBI-ProteinID:
XP_030217384
Ensembl:
ENSGMOG00000013638
LinkDB
All DBs
Position
7:complement(22476997..22502879)
Genome browser
AA seq
1045 aa
AA seq
DB search
MAQIRKSACEGVRTNFRADHAGPLVSTRQEILTSLVSALDSVCLAMSKLNAEVACVTVHE
DSVIAVGTEKGRVFLNSRREIQTDFFKFCRVPCLQSATHAPANTHIKVQEGDVSKSLEGE
TLKQRPSHTSLSEPQSNIFVLIKMVEEVFTVLYSEAVGQSSLVPVPYEWIQKEPGCVVAH
GLPEGVCLKKPSEYDTKTLMKILEQSHRIHFSVKRPSADSPRESRPAADLNHSPSPAKLS
PGAHGNAAKPQPPQGPSTSSSPPSSSSSSSITASNSVLSSFLYGMPMSSKPHPLDSNLDI
KPVCLLNLGKERAGAMATGGDIGASARDGYCQEEMIGVPNDLGQSPPGVHISKRLLFSIV
HEKSEKWDSFIRETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIFG
IPDQIPFKRPCTYGVPKLKRILDERHAIRFVVKRMFDERIFTAAGKMAKEDGRHDLSSMC
SSLEDGLPDSLCLPHIPAVASSSSSLELISNPHGSSRSTSACGSPFVDCEAGPSGECLPL
KRIKTEPSEEDIIQVTVADAGAGSSSGGGGGEEPSEVPPEPQAETPVAAVCPATTSPPSA
PFHPHPHPLFHHQLPENHAAEDMSPKAGPYGTGRLSEGNIVEDIGEMILQLRKQVESLFS
IKYAEALGLPEPAKVPYSKFQMYPQDLYVTGMPEGVTFRRPNCFGAAKLRKVLAVGSQIQ
FIIRRPELLTELVKQEMPPIPLCDADLDNKDALTSDDMIPLSKRPGYTECMEGKLSRADL
ANTLREQVQDMFNRKYGEALGIKYPVQVPYKRIKSNPGSVLIEGLPPGIPFRKPCTFGSQ
NLERILAVADKICFTITRPFQGLIPKPAPRRVTLLKKAFGSISDDEDINRMGEKVMLREQ
VKELFNRKYGEALGLDQPVVVPYKLIRASPESVEVSGLPEGVPFRNPNNYDLLCLEKILQ
ASDQVSVDIKSQLQPFAEICTEACNTEGTEVSINRRKRKRVQECNRLPESSNTGVSPNQI
PVMQWPMYMVDYSGVNVQVPGKVKY
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatacgaaagtctgcatgtgaaggtgtcaggacaaacttccgggcggaccat
gctggcccgctggtctccaccagacaggagatcctcaccagtctggtgtccgccctggac
tctgtgtgcctggccatgtccaagctgaacgcagaagtggcgtgtgtcaccgtgcacgag
gacagtgtgatcgccgtgggcacggaaaagggcagggtgttcctcaactctcgacgggaa
atccagacagacttcttcaagttttgccgcgtgccatgtttgcaaagtgccacgcacgcg
ccagccaacacacacatcaaagtccaggagggtgatgtgagcaagagtctggagggcgag
accctgaagcagaggcccagccacacgtctctctcggaaccccagtccaacatctttgtc
ctgatcaagatggtggaggaagtcttcaccgtgctttacagcgaggccgttggacaaagc
agcctggtcccggtgccttacgagtggatccagaaagagcccggctgcgtggtggcccac
gggctgccggagggggtctgcctgaagaagccctcggagtacgacaccaagaccctcatg
aagatcctggagcagagccaccgcatccacttctccgtcaagcgaccgtcggcggactcg
ccgcgggagtccaggcccgccgcagacctcaaccacagcccctccccggccaagctgtcg
ccgggcgcccatggcaacgccgccaaaccccagccgccccagggaccctccacgtcctcc
agccccccctcctcttcctcttcctcctccatcaccgccagcaactcggtgctttccagc
ttcctgtacggcatgcccatgtcctccaagccccaccccctggacagcaacctggacatc
aagcccgtctgtctcctcaacctgggcaaggaacgggccggcgccatggcgaccgggggt
gacataggcgcatcggccagggacggttattgccaggaagagatgatcggagtgcccaat
gacctaggacagagcccacccggtgtccacatctccaagagactgctgttctccatagtg
catgagaaatcagaaaagtgggactcgttcatacgggaaacggaggacatcaacacactg
agggaatgcgtccagatcttgttcaacagcagatatgcggaggccctgggtctggaccac
atggtgcccgtgccgtaccgaaagattgcgtgcgaccccggggcggtggagatcttcggc
atcccggaccaaatccccttcaagagaccgtgcacgtacggcgttcccaagctgaagcgc
atcctggacgaacggcacgccatccgcttcgtggtcaaacgaatgtttgatgaaaggatt
ttcacagctgccggcaagatggccaaggaggacgggcgccacgacctgagctccatgtgc
tcctcgctcgaggacggcctcccggacagcttgtgtctcccgcacatccccgccgtcgcg
tcctcctcctcctccctggagctcatcagcaaccctcatggcagcagcagatcaaccagt
gcctgtggcagtccctttgtcgattgtgaggccggtccttcgggagagtgccttcccttg
aagaggatcaaaactgagccctctgaagaggacatcattcaggtgacggtggcagatgcc
ggtgccggcagcagcagcggcggtggtggtggggaggagcccagcgaggtgccccccgag
ccccaggcagagaccccggtcgcagccgtgtgcccggccaccacttctcccccctctgcg
cccttccaccctcacccccaccctctcttccatcaccaactcccagagaaccacgcagct
gaagatatgtcccctaaagcaggcccctacggcaccggaagactctctgaagggaatatt
gtggaggacattggtgaaatgattctccagctccggaaacaagttgagagccttttcagc
atcaagtacgctgaggcgctgggcctgcccgagccggccaaggtgccctactccaagttc
cagatgtacccgcaggacctgtacgtcaccggcatgccagagggcgtcaccttccggagg
cccaactgcttcggggcggccaagctgcgcaaggtcctggccgtcggcagtcagatccag
ttcatcatccggaggcctgaactgctgacagagctcgttaaacaggagatgccccccatt
cctctctgtgatgcagacttggataacaaggatgccttaacatcggatgatatgatccct
ttatctaagagacctggctacacagagtgcatggagggcaagctctcccgggccgacctg
gccaacacgctgcgggagcaggtgcaggacatgttcaaccggaagtacggcgaggcgctg
ggcatcaagtacccggtgcaagtgccttacaagcggatcaagagcaacccgggctcggtg
ctcatcgagggcctcccgccgggcatccccttccgcaagccctgcaccttcggctcgcaa
aacctggagcggatcctggccgtggccgacaagatctgcttcaccatcaccagacctttc
caaggactcattccaaaacctgcaccaaggcgtgtcaccttactcaagaaggccttcggc
tccataagcgacgacgaagacatcaaccgcatgggggagaaagttatgcttcgagagcag
gtcaaggagctgttcaacaggaaatacggtgaggctttgggtctggaccagcccgtggtg
gtgccgtacaagctgatccgagccagcccggagtcggtggaggtcagcggcctgcccgag
ggcgtccccttcaggaaccccaacaactacgacctgctctgcctcgagaagatcctccaa
gcctccgaccaagtcagtgtcgacatcaagagccagctacagccttttgcagaaatatgt
accgaagcttgcaacacagaggggacagaggtctccattaatcgacgcaaacgcaagcgg
gtccaggagtgcaacagactccctgaatcatccaacacgggagtatcgcctaatcagatt
ccagtaatgcaatggcccatgtacatggtagactacagcggagtgaatgtgcaggttcca
gggaaagtcaagtactga
DBGET
integrated database retrieval system
