Gadus morhua (Atlantic cod): 115547406 Help Entry 115547406         CDS       T10832                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh03440   Homologous recombination gmh03450   Non-homologous end-joining gmh04218   Cellular senescence Brite KEGG Orthology (KO) [BR:gmh00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     115547406 (rad50)    03450 Non-homologous end-joining     115547406 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     115547406 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:gmh03032]     115547406 (rad50)    03400 DNA repair and recombination proteins [BR:gmh03400]     115547406 (rad50) DNA replication proteins [BR:gmh03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     115547406 (rad50) DNA repair and recombination proteins [BR:gmh03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      115547406 (rad50)     BRCA1-C complex      115547406 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      115547406 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B AAA_15 AAA_22 AAA_29 SMC_N AAA_13 zf-met AAA_16 Motif Other DBs NCBI-GeneID:  115547406 NCBI-ProteinID:  XP_030217475 Ensembl:  ENSGMOG00000013572 LinkDB All DBs Position 7:complement(11960737..11991941) Genome browser AA seq 1312 aa AA seqDB search MSRIDKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYASSGELPPG AKGAAFVHDPKDAHETDVRAQIRLVFTDVNGEKVAIQRSMSCTQKAKNYTFKTLEGVITR IKQEKKISISSKCGELDREMISGLGVSKSVLNNVIFCHQEESNWPLSEGKALKEKFDSIF AATKYIKALETMRQLRLKKGQIVRECQVELRYLKQMKEKALQIEEMLAAKEAQLMASRDS VQRVEGQIEPLENRQMDIDTKLGKVMKLDNDIKALDSRRKQMEEDNKDLEETMEQVFQGS DDQLQDLYQNHQKTVREKERRLTDGQKELERAARECQRLTRVKSELLVEQGRLDQEADRH STNITNRDAQVRSLSSYLELDGFDRTPFIQSQLQSFHRHVTERLEQEKRAANQIMADLQE KEQQKQQAMDETRDRKTGLESVVALKRDLQARKQQELRNLRADLERLDGSSGRLQELENE LAKHERELQTAVQSSSVEALRAEVVLLQGEREELDARRRRLDQEMDTLNTHTTTRTQMDM LQKDKTEKEEQVRRIKSRHTEDLVSLLGHFPTKLKLEDWIHTKSKEINATREKLARLNKE LASSEQNKSYMSAELRRKEQQLSSDEEKFFEVCGSQDLEQDLGKLQEELEKTSKQRAMLA GATAVYTQFISQLTEDNGPCCPVCQRTFPSEVELDEVVSDMQSKLRLVPDKLKNTEQELR RKEGRRDQMMALRPVRVSMEKLQKEELPELRNRLQAVNRNIERLKGDVEEQETGLSVMIS EEETAKACLQDIALMDRFLLDLKEVDRKIAQQEARLQGVDLSRTVQQVSQEKQETQHRLD TTSSKVELKRKLIQDQQERVQSLRSAVNETRGQKLQLSSDMQQQQALTAQSVETTTEVQS LTREIRDAKEQLTPISAMLEKLQQEREELVVRRRQKQDEGQEKMNTIKDKVKNISTLERD ISRYTEEGKQEHKEQKESELHDTNGQLHEAEKHKEKITKEMGAVRQDIDTQKVQERWLQD NLTLRRRGEELKEVLSRREALLKDMGNMQVMQLRQERREVERKVEELKKTRSIAQGRQNG FEEEILHCRKELREDQYNKADERFRDKMIVMRTTELVNKDLDIYYKALDQTIMKFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRTYNYRVVMMKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYVEHFYRIRKNQEQNSEIIKCSITSLSSHLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtccaggatagataagatgagcatcctgggggtgaggagttttggcgtggaggacaaa gacaaacaagtcatctccttcttcagccctctcaccgttctggttggacccaatggagca ggaaaaactactatcatagagtgcctgaagtatgcatcatcaggagaacttccccctgga gccaaaggggctgccttcgtccacgaccctaaagacgcccatgagacggatgtgcgagcc cagatccgtctggtgttcaccgacgtgaacggggagaaggtagccatacagcgctccatg tcctgcacacagaaggcaaagaactacaccttcaagacgctagagggcgtcataacccgc atcaagcaagagaagaagataagcatctcctccaagtgtggtgagctggaccgggagatg atctccggtcttggcgtgtccaagtcggtgctgaacaatgtcatcttctgccaccaagag gagtccaactggcccctcagcgagggaaaggccctcaaggagaagtttgactccatcttt gcagcaacaaagtacatcaaggccctggaaaccatgcggcagctgcgcctgaagaagggc cagatcgtgcgggagtgccaggtggagctacgctacctgaagcagatgaaggagaaggct ctgcagatcgaggagatgctggccgccaaggaggcccagctaatggcctccagggacagc gtgcagcgggtcgagggccagatcgagcccctcgagaaccggcagatggacatcgacaca aagctgggcaaggtgatgaagctggacaacgacatcaaggccctggacagcaggaggaaa cagatggaggaggacaacaaggacctggaggagactatggaacaggtgttccagggttct gacgaccagctgcaggacctctaccagaaccaccagaagacggtgcgggagaaggagagg aggctgactgacgggcagaaggagctggagagagccgcccgcgagtgccagagactcacc agggtcaagtctgagctgctggtggaacaaggtcgtttggaccaggaggccgaccgccac tcgaccaacataacaaaccgcgacgcccaggtgcgctccctgtcctcctacctggagctg gacggcttcgaccgcacgcccttcatccaatcccagctgcagagcttccaccgccacgtc accgagaggctggagcaggagaagcgggcggccaatcagatcatggcggacctgcaggag aaggagcagcagaagcagcaggccatggacgagacgcgggacaggaagacggggctggag agcgtggtggcgctgaagagagacctgcaagctcgcaagcagcaggagctgaggaacctg agggccgacctggagcggctggacggctcctcgggccggctgcaggagctggagaacgag ctggccaagcatgagcgcgagctgcagacggcggtgcagagctccagtgtggaggccctg agggccgaggtggtgctgctgcagggggagcgggaggagctggacgccaggcgacggcgg ctggaccaggagatggacacgctcaacacacacaccaccacgcgcacgcagatggacatg ctgcagaaagacaagacggagaaggaggagcaggtgcgtaggatcaagtcccgccacact gaggatctggtgtctctgctgggtcacttccccaccaagctgaagctggaggactggatc cacaccaagtctaaggagatcaacgccacccgggaaaagctggccagactcaataaggag ctggcctccagcgagcagaacaagagctacatgtctgccgagctgcgcaggaaggagcag cagctgtccagcgacgaggagaagttctttgaagtgtgcggcagccaggacctggagcag gacctgggcaagctgcaggaagagctggagaagacctccaagcagagagccatgctggcg ggcgccacggcggtgtacacgcagttcatcagccagctgacggaggacaatgggccctgc tgccccgtgtgccagcgcaccttcccctcggaggtggagctcgacgaggtggtgagcgac atgcagtccaagctgcggctggtgcccgacaagctgaagaacacggagcaggagctgagg aggaaggagggcaggcgggaccagatgatggctctgcggcccgtcagggtgtccatggag aagctccagaaggaggagctccccgagctgaggaaccggctgcaggcggtgaaccggaac atcgagaggctgaagggggacgtggaggagcaggagacggggctgtctgtgatgatctct gaggaggagacggccaaggcctgcctgcaggacatcgcgctcatggaccgcttcctgctg gacctgaaggaggtggacaggaagatcgcccagcaggaggccaggctgcagggagtggac ctgagccgcaccgtgcagcaagtcagccaggagaaacaggagacccagcaccggctggac accacctccagtaaggtggagttgaagcgcaagctgatccaggaccagcaggagcgcgtg cagagcctgcgcagcgcggtcaacgagacgcgcggccagaagctgcagctgagcagcgac atgcagcagcagcaggcgctgactgcccagagtgtggagaccaccacggaggtccagagc ctcaccagggagatccgggacgccaaggagcagctgacccccatctcagccatgttggag aagctgcagcaggagagggaggagctggtggtccgcaggagacagaagcaggacgaggga caggagaagatgaacaccatcaaggacaaagtgaagaacatcagcacgctggagagagac atcagcagatacacggaggagggcaaacaggaacacaaagagcaaaaagaatctgagctc cacgacaccaacgggcagcttcacgaggccgagaaacacaaggagaagatcaccaaggag atgggcgccgtgcggcaggacatagacacccagaaggtgcaggagcgctggctgcaggac aacctgactctgcggcggcgcggtgaggagctgaaggaggtgctgtcgcggcgggaggct ctgctgaaggacatgggcaacatgcaggtcatgcagctgcgccaggagcggcgagaggtc gagcggaaggtggaggagctgaagaagacccgcagcatcgcacaggggcgccagaacggc ttcgaggaagagatcctccactgcaggaaggagctgcgcgaggaccagtacaacaaggcg gacgagcgtttccgggacaagatgatcgtgatgaggaccactgagctggtcaacaaggac ctggacatctactacaaggccctggaccaaaccatcatgaagtttcacagtatgaaaatg gacgagatcaacaagataatccgagacctgtggcgtagcacgtacaggggtcaagacata gagtacgtggagatccggtctgacgtggatgagaactcgtcggcgggggtgaagaggagg acctacaactaccgggtggtgatgatgaagggagacacggccctggacatgaggggccgc tgcagcgccggacagaaggtgctggcttccctgatcatccgcctggccctggccgaaacg ttctgtctgaactgtggcatcctggcgctggatgaacccaccaccaacctggaccgagag aacatcgagtccctggcccacgcccttgtcgagatcatcaagagccgctcccgccagcgc aacttccagctgctgatcatcacccacgacgaggactttgtggagctgctgggccgctcc agctacgtggagcacttctaccgcatccgcaagaaccaggagcagaactctgagatcatc aagtgtagcatcacctccctctcctcccacctccactga

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