Gadus morhua (Atlantic cod): 115547413
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Entry
115547413 CDS
T10832
Symbol
zbed1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
115547413 (zbed1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115547413 (zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115547413
NCBI-ProteinID:
XP_030217481
Ensembl:
ENSGMOG00000025869
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Position
7:1709883..1714866
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AA seq
772 aa
AA seq
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MDFLPKEPPEFRGMGPGGAVSSSGVALSVGPGPHLVAHPRAKSKVWRYFGFDTDSDGCIV
HWKRIYCRVCMSQIAYSGNTSNLSYHLEKNHPAQFGELVKSNAGPGHPPQHQQRVGVAAA
TARAPKPEPQGARTMSSSSYGTQAVSELALRSGFAAGGIGVAGGDRRRPDLTRAVCDFVC
EGMHPVSVVEEPTFRALLRAADPRYALPTKHELALKLVPRAYERAREAARAALAGVMSCG
VTTDLWRSPAHDRAYVTLSVHAVTRGGGGGFAATSTCLKTFSVPGEDPAETVTRALYEAL
ADWGVVHKVSGVTTDGSPDVVKACSLLELSVQMPCLGHALGRAVGEAFRLPRAQALLAEC
RKLVEHFRATAAAGYALREQQRRRGVAERPLVADGGGGGGWLSTLAMLRRLREQRAAVAA
ALGDVPAGQRLSFEASDWARLEAWVELLRPVRAVTELLAACRYPALSTVRPALHMLQSAA
LAARDGDLKEIATAKEAVARALAAAYSQPQEVAAFLNVAAFLDPRYKRLPFLSAAERAQV
EAQVVEEAKAVLEKLGAEAPPCPGSFSPPSEEEPLQPPPCKKPHLNPHLNPDLNAHLNPD
LNPDLNPDLNPHLNPHLNPHLNSHLNPHLSQGQDNPLAAIFLQSDSDQTQEELHAQAVEE
LGNYKAQRLLGLNEDPLAWWSSHAPLFPTLARVLQRYWCVPATSVPCHRLFGAAGGGAHA
GKRARLGPPALVDQQVFLYENARGYHDAEPSDAELEDAILWDGGGALVAPLE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggacttccttcccaaggagcccccggagttccgaggcatgggtcccgggggggcggtc
tcgtcgtcgggcgtcgccctcagcgtgggccccggcccccacctcgtggcccacccgcgg
gccaagagcaaagtgtggcgctacttcggcttcgacacggactcggacggctgcatcgtg
cactggaagaggatctactgccgcgtgtgcatgagccagatcgcctactcgggcaacacc
tccaacctgtcctaccacctggagaagaaccacccggcccagttcggcgagctggtcaag
agcaacgcgggtccgggtcacccgccgcagcaccagcagcgggtgggcgtggccgcggcc
accgcccgcgcgcccaaacccgaaccccagggggcgaggacgatgtcgtcgtcgtcgtac
gggacacaggcggtgtcggagctcgcgctccggtcagggttcgcggccggcggcatcggc
gttgccggcggcgaccgcagacgcccggacctgacccgggcggtgtgcgacttcgtctgc
gaggggatgcacccagtctcggtggtggaggagcccacgttccgagcgctcttgcgtgcg
gcggacccccgctacgccctgcccaccaagcacgagctggcgctgaagctggtcccgcgg
gcgtacgagcgggcgcgcgaggccgcccgggccgcgctggcgggcgtgatgagctgcggc
gtgaccacggacctgtggcggagccccgcccacgaccgcgcctacgtcacactgtcggtg
cacgccgtcacccgcggcggcggcggcggcttcgcggcgacgagcacgtgcctgaagacg
ttctcggtgccgggggaggacccggcggagacggtgacgcgcgccctgtacgaggcactg
gccgactggggcgtggtgcacaaggtgagcggcgtgaccaccgacggctcgccggacgtg
gtcaaggcgtgctccctgctggagctctcggtgcagatgccgtgcctcggccacgccctg
ggccgcgccgtgggcgaggccttccgcctgccccgtgcccaggccctcctggccgagtgc
cgcaagctggtggagcacttcagggccacggcggcggccgggtacgcgctgcgggagcag
cagcgccgccgcggcgtggcggagcgccccctggtggcggacggcggcggcggcggcggc
tggctgtccacgctcgccatgctgcggcggctgcgggagcagcgggcggcagtggcggcg
gcgctgggcgacgtgcccgccgggcagcggctgagcttcgaggcgtcggactgggcgcgg
ctggaggcctgggtggagctgctgcggccggtgcgggcggtgacggagctgctggcggcc
tgccgctaccccgccctcagcacggtgcggccggcgctgcacatgctgcagagcgccgcg
ctggccgcgcgcgacggcgacctcaaggagatcgccacggccaaggaggcggtggcccgg
gcgctggccgccgcctactcccagccgcaggaggtcgcagccttcctcaacgtggcggcc
ttcctggacccgcgctacaagcggctgcccttcctatcggcggcggagcgcgcccaggtg
gaggcgcaggtggtggaggaggccaaggccgtgctggagaagctgggcgccgaggctccg
ccctgccccgggagcttctcccccccctcggaggaggagcctctccagccgccaccgtgc
aagaagccgcacctcaacccgcacctcaacccggacctcaacgcgcacctcaacccggac
ctcaacccggacctcaacccggacctcaacccgcacctcaacccgcaccttaacccgcac
ctcaactcgcacctcaacccgcacctcagccagggccaggacaaccccctggcggccatc
ttccttcagtcggactcggaccagacgcaggaggagctccacgcgcaggcggtggaggag
ctggggaactacaaggcccagaggctgctggggctgaacgaggaccccctggcgtggtgg
agcagccacgccccgctgttccccacgctggcccgcgtgctgcagaggtactggtgcgtg
ccggccaccagtgtgccgtgccaccggctcttcggtgcggcgggtggcggcgcccacgcc
gggaagagggcccgcctgggcccgcccgccctggtggaccagcaggtgttcctgtacgag
aacgcccgcggttaccatgacgccgagcccagcgacgcggagctggaggacgccatcttg
tgggacggaggcggtgcgctcgtggcgccgctggagtga
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