Gadus morhua (Atlantic cod): 115547477
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Entry
115547477 CDS
T10832
Symbol
smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115547477 (smg8)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115547477 (smg8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
115547477
NCBI-ProteinID:
XP_030217582
Ensembl:
ENSGMOG00000017394
UniProt:
A0A8C4ZQC6
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Position
7:complement(9778602..9784333)
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AA seq
934 aa
AA seq
DB search
MAFSIGIEALVQSVILEDTLYKDEGLCVLGIFGKSAMQMGVLKESLINTLADKHIFSLFG
GVEENNSENGSLIQAVYSQENRVLYLVLTSVYDNRQLLRACETLSMELGHSDAQDLWKGM
DKQHCLHLLYLFSLCHVLILVQPNCAFDVTYDRLFRALDALRQKVLPLIRAAVKDTQVSK
EWKLNCRPCPPRLLFVFQINGALKVPTGTDSAGTSDKPKKHSPRRRLQHALEDQIYRIFR
KSRVLTNQSSNCLFSVPANQAFVYVVPGPAEDPLGALLGHLRSSCALREQDSNSSMTGPR
RYQQIRRLARLPHTNVDYSGVSGQLVDCSLKDFLWQHIDLVLTKKGFDDSVGRNPQPSHF
ELPTYAKWVQVACKLHQVLIHNTEEDSAEFALKVQSQLKVLEGFLDADAKFSENRCQKAL
PLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYKFWSNGHQ
LCEERSLTDQHCVHKFHLLPQPGEKPDMDHNPPVLHHNSRGRSTNACNCGRKQAPREDPF
DIQSANYDFFLMVEDKCCAKLERVDFPVFEPSTQDPAPAPASACVEAPCPGSDGSAPPSQ
GEKLKDPQPATAASGSAAHSHTPVDCTGLSLALSLGQSTDSMGPYGEADGSDVSAKRPSL
VDRQPSTVEYLPGMLHTGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLL
PWDLVIRSRSSEEDTGLAEPLDGGGSSWPAPNKSLVGKRGCTGGPGRGRRRDDVARAFVG
FEYEDSRGRRFLSSGPDKIVKVLGPGGAKEPASRVLNTDMPLYVPSPAQGRGLKPHYAQL
MRLYILVPDAPLEITLNPQVQPGALPCPVFHPERTELVLPADGLWVLRFPYSYQTERGPC
YPPKENQPLSAYKVLRGILRAATVSPPPPQLLNC
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcattttctattggtatcgaagcactcgtacagtccgtgatattagaggacacatta
tataaagacgaaggtctctgtgtactcggtatatttggtaaaagcgcgatgcaaatgggg
gtccttaaagaatccctgataaacacgctagcagacaaacacatcttctctctgttcgga
ggagtcgaggagaataactcggagaacggaagcctcatccaggctgtctacagccaggag
aaccgggtgttgtatctggtgctcacttcagtctacgacaaccggcaactcctccgtgca
tgcgagactctcagcatggagctcgggcactccgacgcccaggacctctggaagggcatg
gataaacagcactgtctgcacctcctctacctgttctccctctgccatgtcctcatcctg
gtccagcccaactgcgccttcgacgtcacttatgaccggctgttccgcgccctggacgct
ctgcggcagaaggtcctcccgctgatccgggctgctgtcaaagacacccaggtctccaag
gagtggaagctcaactgtcgcccttgcccccctcggctgctttttgtgtttcagattaac
ggagcgttaaaagtaccgacgggaactgattcggcaggaacctcagacaagcccaaaaag
cattctccgaggaggcggctccagcacgccttggaggaccaaatttatcgcattttccgc
aaaagccgtgtcctcactaatcagagcagcaactgtttgttcagcgtacccgccaaccaa
gcgtttgtgtacgtggtcccggggccagctgaagacccgttgggtgcgttgcttggacac
ctgcgatccagctgcgccttgcgtgaacaagattcaaactcctcaatgacgggacccaga
cggtaccaacagatccgtcggttggccagactgccccacactaatgtcgactacagcggg
gtaagtgggcagctggtggactgcagtttgaaagatttcctttggcagcacatagatcta
gtattaactaaaaaaggttttgacgacagtgttggacgcaacccacagccttcgcacttt
gagctcccgacctacgccaagtgggtccaggtggcgtgcaaactgcaccaggttctcata
cacaacacggaggaggacagcgcagaatttgctctcaaagtgcaaagccagctgaaagtt
ttggaaggcttcctcgatgcggatgcaaagttttctgagaaccgctgccagaaagccctg
ccgctggcccacagcgcctaccagtcgaacctgccgcacaactacacaaccacggtccac
aagaaccaactggcccaggcactgcgcgtctacagccaacacgcccgaggcgtcgcgttc
cagcgctacgccctgcagctccacgaggactgctacaagttctggagcaacgggcaccag
ctgtgtgaagagcgaagtctcacggaccaacattgtgttcacaagttccacctgctgcca
cagccaggtgagaagcccgacatggaccacaaccccccggtcctccaccacaacagccgg
gggcgctccaccaacgcctgcaactgtggccggaagcaagcgccccgcgaggacccgttt
gatatccagtccgccaactatgacttctttctgatggtggaggacaagtgctgcgccaag
ctggagcgggtggacttccccgtctttgagcccagcactcaggaccctgcgccggccccc
gcctccgcctgcgtggaggcgccgtgccccgggtccgacggctccgcgccgcccagccag
ggggagaagctgaaggacccacagccggccacggccgcctccggcagcgcggcccacagc
cacacccccgtagactgcaccggcctgagcctggcgctcagcctggggcagtccacggac
agcatggggccgtacggggaggcggacgggagcgacgtctccgccaagaggcccagcctg
gtggaccggcagccctccaccgtggagtacctcccggggatgctccacacgggctgcccc
aaggggctcctccccaagttctccagctggtccctggtcaagctggggccggccaagtcg
tacaactgccacacgggcctggagcagccgggcttcctgcccggctcctccttcctgctg
ccgtgggacctggtgattcgctcccggagctccgaagaggacaccggattggccgagccg
ctggacggaggcgggtcgtcgtggcccgcccccaacaagtcgctggtggggaagcgcggg
tgcacggggggcccggggaggggccggcgacgggacgacgtggccagggcctttgttggc
tttgagtacgaggacagcaggggtcgccgatttctcagctcggggcccgacaagatcgtg
aaggtactggggcccgggggcgccaaggagccggccagccgggtcctcaacacagacatg
cccctctacgtgccctcgccggctcaggggcggggcctcaagcctcattacgcccagctg
atgcgcctttacatcctggttcccgacgctcccctagagatcactctgaacccacaggtc
cagcccggtgccctcccgtgtcccgtcttccaccccgagaggacggagctggtgctgccg
gcggacggcctgtgggtgctgcgcttcccctactcctaccagacggagcggggcccctgc
tacccgcccaaggagaaccagcccctctccgcctacaaggtgctgcgagggatcctgcgt
gctgccaccgtcagccctcctccaccccagctcctcaactgctga
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