KEGG   Gadus morhua (Atlantic cod): 115547477
Entry
115547477         CDS       T10832                                 
Symbol
smg8
Name
(RefSeq) protein SMG8
  KO
K18734  protein SMG8
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115547477 (smg8)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     115547477 (smg8)
SSDB
Motif
Pfam: Smg8_Smg9 DUF2794
Other DBs
NCBI-GeneID: 115547477
NCBI-ProteinID: XP_030217582
Ensembl: ENSGMOG00000017394
UniProt: A0A8C4ZQC6
LinkDB
Position
7:complement(9778602..9784333)
AA seq 934 aa
MAFSIGIEALVQSVILEDTLYKDEGLCVLGIFGKSAMQMGVLKESLINTLADKHIFSLFG
GVEENNSENGSLIQAVYSQENRVLYLVLTSVYDNRQLLRACETLSMELGHSDAQDLWKGM
DKQHCLHLLYLFSLCHVLILVQPNCAFDVTYDRLFRALDALRQKVLPLIRAAVKDTQVSK
EWKLNCRPCPPRLLFVFQINGALKVPTGTDSAGTSDKPKKHSPRRRLQHALEDQIYRIFR
KSRVLTNQSSNCLFSVPANQAFVYVVPGPAEDPLGALLGHLRSSCALREQDSNSSMTGPR
RYQQIRRLARLPHTNVDYSGVSGQLVDCSLKDFLWQHIDLVLTKKGFDDSVGRNPQPSHF
ELPTYAKWVQVACKLHQVLIHNTEEDSAEFALKVQSQLKVLEGFLDADAKFSENRCQKAL
PLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYKFWSNGHQ
LCEERSLTDQHCVHKFHLLPQPGEKPDMDHNPPVLHHNSRGRSTNACNCGRKQAPREDPF
DIQSANYDFFLMVEDKCCAKLERVDFPVFEPSTQDPAPAPASACVEAPCPGSDGSAPPSQ
GEKLKDPQPATAASGSAAHSHTPVDCTGLSLALSLGQSTDSMGPYGEADGSDVSAKRPSL
VDRQPSTVEYLPGMLHTGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLL
PWDLVIRSRSSEEDTGLAEPLDGGGSSWPAPNKSLVGKRGCTGGPGRGRRRDDVARAFVG
FEYEDSRGRRFLSSGPDKIVKVLGPGGAKEPASRVLNTDMPLYVPSPAQGRGLKPHYAQL
MRLYILVPDAPLEITLNPQVQPGALPCPVFHPERTELVLPADGLWVLRFPYSYQTERGPC
YPPKENQPLSAYKVLRGILRAATVSPPPPQLLNC
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcattttctattggtatcgaagcactcgtacagtccgtgatattagaggacacatta
tataaagacgaaggtctctgtgtactcggtatatttggtaaaagcgcgatgcaaatgggg
gtccttaaagaatccctgataaacacgctagcagacaaacacatcttctctctgttcgga
ggagtcgaggagaataactcggagaacggaagcctcatccaggctgtctacagccaggag
aaccgggtgttgtatctggtgctcacttcagtctacgacaaccggcaactcctccgtgca
tgcgagactctcagcatggagctcgggcactccgacgcccaggacctctggaagggcatg
gataaacagcactgtctgcacctcctctacctgttctccctctgccatgtcctcatcctg
gtccagcccaactgcgccttcgacgtcacttatgaccggctgttccgcgccctggacgct
ctgcggcagaaggtcctcccgctgatccgggctgctgtcaaagacacccaggtctccaag
gagtggaagctcaactgtcgcccttgcccccctcggctgctttttgtgtttcagattaac
ggagcgttaaaagtaccgacgggaactgattcggcaggaacctcagacaagcccaaaaag
cattctccgaggaggcggctccagcacgccttggaggaccaaatttatcgcattttccgc
aaaagccgtgtcctcactaatcagagcagcaactgtttgttcagcgtacccgccaaccaa
gcgtttgtgtacgtggtcccggggccagctgaagacccgttgggtgcgttgcttggacac
ctgcgatccagctgcgccttgcgtgaacaagattcaaactcctcaatgacgggacccaga
cggtaccaacagatccgtcggttggccagactgccccacactaatgtcgactacagcggg
gtaagtgggcagctggtggactgcagtttgaaagatttcctttggcagcacatagatcta
gtattaactaaaaaaggttttgacgacagtgttggacgcaacccacagccttcgcacttt
gagctcccgacctacgccaagtgggtccaggtggcgtgcaaactgcaccaggttctcata
cacaacacggaggaggacagcgcagaatttgctctcaaagtgcaaagccagctgaaagtt
ttggaaggcttcctcgatgcggatgcaaagttttctgagaaccgctgccagaaagccctg
ccgctggcccacagcgcctaccagtcgaacctgccgcacaactacacaaccacggtccac
aagaaccaactggcccaggcactgcgcgtctacagccaacacgcccgaggcgtcgcgttc
cagcgctacgccctgcagctccacgaggactgctacaagttctggagcaacgggcaccag
ctgtgtgaagagcgaagtctcacggaccaacattgtgttcacaagttccacctgctgcca
cagccaggtgagaagcccgacatggaccacaaccccccggtcctccaccacaacagccgg
gggcgctccaccaacgcctgcaactgtggccggaagcaagcgccccgcgaggacccgttt
gatatccagtccgccaactatgacttctttctgatggtggaggacaagtgctgcgccaag
ctggagcgggtggacttccccgtctttgagcccagcactcaggaccctgcgccggccccc
gcctccgcctgcgtggaggcgccgtgccccgggtccgacggctccgcgccgcccagccag
ggggagaagctgaaggacccacagccggccacggccgcctccggcagcgcggcccacagc
cacacccccgtagactgcaccggcctgagcctggcgctcagcctggggcagtccacggac
agcatggggccgtacggggaggcggacgggagcgacgtctccgccaagaggcccagcctg
gtggaccggcagccctccaccgtggagtacctcccggggatgctccacacgggctgcccc
aaggggctcctccccaagttctccagctggtccctggtcaagctggggccggccaagtcg
tacaactgccacacgggcctggagcagccgggcttcctgcccggctcctccttcctgctg
ccgtgggacctggtgattcgctcccggagctccgaagaggacaccggattggccgagccg
ctggacggaggcgggtcgtcgtggcccgcccccaacaagtcgctggtggggaagcgcggg
tgcacggggggcccggggaggggccggcgacgggacgacgtggccagggcctttgttggc
tttgagtacgaggacagcaggggtcgccgatttctcagctcggggcccgacaagatcgtg
aaggtactggggcccgggggcgccaaggagccggccagccgggtcctcaacacagacatg
cccctctacgtgccctcgccggctcaggggcggggcctcaagcctcattacgcccagctg
atgcgcctttacatcctggttcccgacgctcccctagagatcactctgaacccacaggtc
cagcccggtgccctcccgtgtcccgtcttccaccccgagaggacggagctggtgctgccg
gcggacggcctgtgggtgctgcgcttcccctactcctaccagacggagcggggcccctgc
tacccgcccaaggagaaccagcccctctccgcctacaaggtgctgcgagggatcctgcgt
gctgccaccgtcagccctcctccaccccagctcctcaactgctga

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